Home
Random
Nearby
Log in
Settings
Donate
About Wikidata
Disclaimers
Search
(Q24794167)
Watch
English
S4: structure-based sequence alignments of SCOP superfamilies
scientific article
In more languages
edit
Statements
instance of
scholarly article
0 references
title
S4: structure-based sequence alignments of SCOP superfamilies
(English)
0 references
main subject
sequence alignment
1 reference
based on heuristic
inferred from title
author name string
James Casbon
series ordinal
1
0 references
Mansoor A S Saqi
series ordinal
2
0 references
language of work or name
English
0 references
publication date
1 January 2005
0 references
published in
Nucleic Acids Research
0 references
volume
33
0 references
page(s)
D219-22
0 references
issue
Database issue
0 references
cites work
PASS2: an automated database of protein alignments organised as structural superfamilies
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=539997
retrieved
7 April 2017
OXBench: a benchmark for evaluation of protein multiple sequence alignment accuracy
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=539997
retrieved
7 April 2017
A fully automatic evolutionary classification of protein folds: Dali Domain Dictionary version 3
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=539997
retrieved
7 April 2017
T-Coffee: A novel method for fast and accurate multiple sequence alignment
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=539997
retrieved
7 April 2017
ALSCRIPT: a tool to format multiple sequence alignments
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=539997
retrieved
7 April 2017
SCOP: a structural classification of proteins database for the investigation of sequences and structures
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=539997
retrieved
7 April 2017
The ASTRAL compendium for protein structure and sequence analysis
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=539997
retrieved
7 April 2017
HOMSTRAD: a database of protein structure alignments for homologous families
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=539997
retrieved
7 April 2017
Multiple protein sequence alignment from tertiary structure comparison: assignment of global and residue confidence levels
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=539997
retrieved
7 April 2017
3DCoffee@igs: a web server for combining sequences and structures into a multiple sequence alignment
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=539997
retrieved
28 September 2017
PASS2: a semi-automated database of protein alignments organised as structural superfamilies.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=539997
retrieved
28 September 2017
Protein structure comparison using SAP.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=539997
retrieved
28 September 2017
SCOP: a structural classification of proteins database
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=539997
retrieved
28 September 2017
MView: a web-compatible database search or multiple alignment viewer
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=539997
retrieved
28 September 2017
Alignment and searching for common protein folds using a data bank of structural templates
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=539997
retrieved
28 September 2017
Definition of general topological equivalence in protein structures. A procedure involving comparison of properties and relationships through simulated annealing and dynamic programming
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=539997
retrieved
28 September 2017
CAMPASS: a database of structurally aligned protein superfamilies.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=539997
retrieved
30 May 2018
3DCoffee: combining protein sequences and structures within multiple sequence alignments.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=539997
retrieved
28 November 2018
Sequence conservation in families whose members have little or no sequence similarity: the four-helical cytokines and cytochromes.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=539997
retrieved
28 November 2018
Identifiers
DOI
10.1093/NAR/GKI043
0 references
DBLP publication ID
journals/nar/CasbonS05
1 reference
stated in
DBLP Dataset 2021-01-02
retrieved
28 January 2021
PMCID
539997
0 references
PubMed ID
15608181
0 references
ResearchGate publication ID
8122245
0 references
Sitelinks
Wikipedia
(0 entries)
edit
Wikibooks
(0 entries)
edit
Wikinews
(0 entries)
edit
Wikiquote
(0 entries)
edit
Wikisource
(0 entries)
edit
Wikiversity
(0 entries)
edit
Wikivoyage
(0 entries)
edit
Wiktionary
(0 entries)
edit
Multilingual sites
(0 entries)
edit
