(Q24798953)

4

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author name string

Vikram Budhraja

1

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Edward Spitznagel

2

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W Timothy Schaiff

Statistical tests for differential expression in cDNA microarray experiments

3

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language of work or name

English

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publication date

2003

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published in

BMC Biology

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volume

1

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issue

1

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page(s)

1

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cites work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=288513

Significance analysis of microarrays applied to the ionizing radiation response

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=288513

Summaries of Affymetrix GeneChip probe level data

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=288513

Normalization for cDNA microarray data: a robust composite method addressing single and multiple slide systematic variation

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=288513

Model-based analysis of oligonucleotide arrays: expression index computation and outlier detection

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=288513

Identifying differentially expressed genes using false discovery rate controlling procedures

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=288513

Assessing gene significance from cDNA microarray expression data via mixed models

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=288513

A Bayesian framework for the analysis of microarray expression data: regularized t -test and statistical inferences of gene changes

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=288513

Analysis of variance for gene expression microarray data

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=288513

A statistical perspective on gene expression data analysis

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=288513

A variable fold change threshold determines significance for expression microarrays

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=288513

Fundamentals of experimental design for cDNA microarrays

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=288513

A variance-stabilizing transformation for gene-expression microarray data

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=288513

Issues in cDNA microarray analysis: quality filtering, channel normalization, models of variations and assessment of gene effects

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=288513

Testing for differentially-expressed genes by maximum-likelihood analysis of microarray data

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=288513

On differential variability of expression ratios: improving statistical inference about gene expression changes from microarray data

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=288513

Peroxisome proliferator-activated receptor-gamma modulates differentiation of human trophoblast in a ligand-specific manner

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=288513

Importance of replication in microarray gene expression studies: statistical methods and evidence from repetitive cDNA hybridizations

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=288513

Non-linear normalization and background correction in one-channel cDNA microarray studies

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=288513

A model for measurement error for gene expression arrays

28 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=288513

On reporting fold differences

28 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=288513

Peroxisome Proliferator-Activated Receptor-γ Modulates Differentiation of Human Trophoblast in a Ligand-Specific Manner1

28 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=288513

Purification, Characterization, andin vitroDifferentiation of Cytotrophoblasts from Human Term Placentae*

28 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=288513

Ratio-based decisions and the quantitative analysis of cDNA microarray images

28 November 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/14641937

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Local mean normalization of microarray element signal intensities across an array surface: quality control and correction of spatially systematic artifacts

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/14641937

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Expression profiling using cDNA microarrays

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/14641937