(Q24804871)

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A configuration space of homologous proteins conserving mutual information and allowing a phylogeny inference based on pair-wise Z-score probabilities

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scholarly article

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A configuration space of homologous proteins conserving mutual information and allowing a phylogeny inference based on pair-wise Z-score probabilities (English)

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1 reference

based on heuristic

inferred from title

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author name string

Olivier Bastien

1

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Philippe Ortet

2

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Sylvaine Roy

3

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Eric Maréchal

4

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language of work or name

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publication date

2005

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BMC Bioinformatics

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6

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1

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49

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1 reference

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A comprehensive comparison of multiple sequence alignment programs

1 reference

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1 reference

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7 April 2017

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1 reference

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7 April 2017

Amino acid substitution matrices from protein blocks

1 reference

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7 April 2017

Basic local alignment search tool

1 reference

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1 reference

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1 reference

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7 April 2017

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1 reference

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1 reference

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1 reference

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7 April 2017

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1 reference

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1 reference

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7 April 2017

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1 reference

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7 April 2017

Construction of phylogenetic trees

1 reference

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7 April 2017

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1 reference

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7 April 2017

Random sequences

1 reference

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9 May 2017

The information content of protein amino acid sequences

1 reference

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9 May 2017

Fundamentals of massive automatic pairwise alignments of protein sequences: theoretical significance of Z-value statistics

1 reference

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A new sequence distance measure for phylogenetic tree construction

1 reference

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28 September 2017

Overcredibility of molecular phylogenies obtained by Bayesian phylogenetics

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=555736

28 September 2017

Lateral transfer at the gene and subgenic levels in the evolution of eukaryotic enolase

1 reference

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28 September 2017

Phylogenetic inferences from molecular sequences: review and critique

1 reference

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28 September 2017

Molecular characterisation of the enolase gene from the human malaria parasite Plasmodium falciparum. Evidence for ancestry within a photosynthetic lineage.

1 reference

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28 September 2017

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1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=555736

28 September 2017

Global statistics of protein sequences: implications for the origin, evolution, and prediction of structure

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=555736

28 September 2017

Histones: structure and function

1 reference

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28 September 2017

Determining divergence times of the major kingdoms of living organisms with a protein clock

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=555736

30 May 2018

Multiple genes for lysozyme in birds

1 reference

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30 May 2018

Amino acid substitutions in structurally related proteins. A pattern recognition approach. Determination of a new and efficient scoring matrix.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=555736

30 May 2018

Estimation of the number of amino acid substitutions per site when the substitution rate varies among sites.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=555736

28 November 2018

Analysis of the compositional biases in Plasmodium falciparum genome and proteome using Arabidopsis thaliana as a reference

1 reference

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28 November 2018

How Meaningful Are Bayesian Support Values?

1 reference

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28 November 2018

The effects of increasing genetic distance on alignment of, and tree construction from, rDNA internal transcribed spacer sequences

1 reference

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28 November 2018

Sequence alignment: an approximation law for the Z-value with applications to databank scanning.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=555736

28 November 2018

Nucleotide bias causes a genomewide bias in the amino acid composition of proteins.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=555736

28 November 2018

Significance of Z-value statistics of Smith-Waterman scores for protein alignments.

1 reference

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28 November 2018

The protozoan parasite Toxoplasma gondii expresses two functional plant-like glycolytic enzymes. Implications for evolutionary origin of apicomplexans

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1 reference

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28 November 2018

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1 reference

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1 reference

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Non-Darwinian Evolution: Consequences for Neutral Allelic Variation

1 reference

https://pubmed.ncbi.nlm.nih.gov/15757521

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Computer analysis of protein evolution / Margaret O. Dayhoff. - (7.1969)

1 reference

https://pubmed.ncbi.nlm.nih.gov/15757521

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Some aspects of protein evolution

1 reference

https://pubmed.ncbi.nlm.nih.gov/15757521

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Inferences from protein and nucleic acid sequences: early molecular evolution, divergence of kingdoms and rates of change

1 reference

https://pubmed.ncbi.nlm.nih.gov/15757521

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

THE EVOLUTION OF HEMOGLOBIN

1 reference

https://pubmed.ncbi.nlm.nih.gov/15757521

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1186/1471-2105-6-49

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DBLP publication ID

journals/bmcbi/BastienORM05

1 reference

DBLP Dataset 2021-01-02

28 January 2021

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