(Q24810641)

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New approaches to the analysis of palindromic sequences from the human genome: evolution and polymorphism of an intronic site at the NF1 locus

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scholarly article

1 reference

Europe PubMed Central

PubMed publication ID

5 July 2017

New approaches to the analysis of palindromic sequences from the human genome: evolution and polymorphism of an intronic site at the NF1 locus (English)

1 reference

Europe PubMed Central

PubMed publication ID

5 July 2017

author name string

Susanna M Lewis

1

1 reference

Europe PubMed Central

PubMed publication ID

5 July 2017

Shuang Chen

2

1 reference

Europe PubMed Central

PubMed publication ID

5 July 2017

Jeffrey N Strathern

3

1 reference

Europe PubMed Central

PubMed publication ID

5 July 2017

Alison J Rattray

4

1 reference

Europe PubMed Central

PubMed publication ID

5 July 2017

language of work or name

0 references

publication date

9 December 2005

1 reference

Europe PubMed Central

PubMed publication ID

5 July 2017

Nucleic Acids Research

1 reference

Europe PubMed Central

PubMed publication ID

5 July 2017

33

1 reference

Europe PubMed Central

PubMed publication ID

5 July 2017

22

1 reference

Europe PubMed Central

PubMed publication ID

5 July 2017

e186

1 reference

Europe PubMed Central

PubMed publication ID

5 July 2017

A general cloning system to selectively isolate any eukaryotic or prokaryotic genomic region in yeast

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1310899

7 April 2017

The human genome browser at UCSC

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1310899

7 April 2017

Finishing the euchromatic sequence of the human genome

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1310899

7 April 2017

Basic local alignment search tool

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1310899

7 April 2017

Transcription-dependent DNA supercoiling in yeast DNA topoisomerase mutants

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1310899

7 April 2017

A ten-minute DNA preparation from yeast efficiently releases autonomous plasmids for transformation of Escherichia coli

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1310899

7 April 2017

Fidelity of mitotic double-strand-break repair in Saccharomyces cerevisiae: a role for SAE2/COM1

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1310899

7 April 2017

Comprehensive human genome amplification using multiple displacement amplification

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1310899

7 April 2017

Palindromic AT-rich repeat in the NF1 gene is hypervariable in humans and evolutionarily conserved in primates.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1310899

28 September 2017

A mechanism of palindromic gene amplification in Saccharomyces cerevisiae

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1310899

28 September 2017

Widespread and nonrandom distribution of DNA palindromes in cancer cells provides a structural platform for subsequent gene amplification.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1310899

28 September 2017

A method for cloning and sequencing long palindromic DNA junctions

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1310899

28 September 2017

Telomerase- and recombination-independent immortalization of budding yeast

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1310899

28 September 2017

Cruciform DNA structure underlies the etiology for palindrome-mediated human chromosomal translocations

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1310899

28 September 2017

Forensic DNA typing by capillary electrophoresis using the ABI Prism 310 and 3100 genetic analyzers for STR analysis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1310899

28 September 2017

Encoded errors: mutations and rearrangements mediated by misalignment at repetitive DNA sequences

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1310899

28 September 2017

Genome coverage and sequence fidelity of phi29 polymerase-based multiple strand displacement whole genome amplification

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1310899

28 September 2017

A palindrome-mediated mechanism distinguishes translocations involving LCR-B of chromosome 22q11.2

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1310899

28 September 2017

Rapid, Stabilizing Palindrome Rearrangements in Somatic Cells by the Center-Break Mechanism

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1310899

28 September 2017

The constitutional t(17;22): another translocation mediated by palindromic AT-rich repeats

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1310899

28 September 2017

Formation of large palindromic DNA by homologous recombination of short inverted repeat sequences in Saccharomyces cerevisiae

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1310899

28 September 2017

Rapid amplification of plasmid and phage DNA using Phi 29 DNA polymerase and multiply-primed rolling circle amplification

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1310899

28 September 2017

Loss of palindromic symmetry in Tg.AC mice with a nonresponder phenotype

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1310899

28 September 2017

AT-rich palindromes mediate the constitutional t(11;22) translocation.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1310899

28 September 2017

Long palindromic sequences induce double-strand breaks during meiosis in yeast.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1310899

28 September 2017

Palindromy is eliminated through a structure-specific recombination process in rodent cells

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1310899

28 September 2017

The SbcCD nuclease of Escherichia coli is a structural maintenance of chromosomes (SMC) family protein that cleaves hairpin DNA

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1310899

28 September 2017

Palindrome resolution and recombination in the mammalian germ line

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1310899

28 September 2017

The second case of a t(17;22) in a family with neurofibromatosis type 1: sequence analysis of the breakpoint regions

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1310899

28 September 2017

Cloning and characterization of DNAs with palindromic sequences

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1310899

28 September 2017

Instability of long inverted repeats within mouse transgenes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1310899

28 September 2017

Differential control of transcription-induced and overall DNA supercoiling by eukaryotic topoisomerases in vitro.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1310899

28 September 2017

The determination of the sequences present in the shadow bands of a dinucleotide repeat PCR.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1310899

28 September 2017

P nucleotide insertions and the resolution of hairpin DNA structures in mammalian cells

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1310899

28 September 2017

Long DNA palindromes, cruciform structures, genetic instability and secondary structure repair

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1310899

28 September 2017

A gene deletion ending within a complex array of repeated sequences 3' to the human beta-globin gene cluster

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1310899

28 September 2017

Deletions and a translocation interrupt a cloned gene at the neurofibromatosis type 1 locus.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1310899

28 September 2017

Evidence for two mechanisms of palindrome-stimulated deletion in Escherichia coli: single-strand annealing and replication slipped mispairing.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1310899

30 May 2018

Nucleotide sequence of the Belgian G gamma+(A gamma delta beta)0-thalassemia deletion breakpoint suggests a common mechanism for a number of such recombination events

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1310899

30 May 2018

The sbcC and sbcD genes of Escherichia coli encode a nuclease involved in palindrome inviability and genetic recombination.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1310899

30 May 2018

DNA supercoiling in Escherichia coli is under tight and subtle homeostatic control, involving gene-expression and metabolic regulation of both topoisomerase I and DNA gyrase.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1310899

28 November 2018

Escherichia coli host strains SURE and SRB fail to preserve a palindrome cloned in lambda phage: improved alternate host strains.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1310899

28 November 2018

Palindromic DNA and genome stability. Further studies

1 reference

https://pubmed.ncbi.nlm.nih.gov/16340004

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Strand misalignments lead to quasipalindrome correction

1 reference

https://pubmed.ncbi.nlm.nih.gov/16340004

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

A novel deletion causing (epsilon gamma delta beta) degrees thalassaemia in a Chilean family

1 reference

https://pubmed.ncbi.nlm.nih.gov/16340004

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Cruciform structures in palindromic DNA are favored by DNA supercoiling

1 reference

https://pubmed.ncbi.nlm.nih.gov/16340004

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Precise and nearly-precise excision of the symmetrical inverted repeats of Tn 5; common features of recA-independent deletion events in Escherichia coli

1 reference

https://pubmed.ncbi.nlm.nih.gov/16340004

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Heat-stable DNA polymerase I large fragment resolves hairpin structure in DNA sequencing

1 reference

https://pubmed.ncbi.nlm.nih.gov/16340004

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Long AT-rich palindromes and the constitutional t(11;22) breakpoint

1 reference

https://pubmed.ncbi.nlm.nih.gov/16340004

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The Mre11 complex is required for repair of hairpin-capped double-strand breaks and prevention of chromosome rearrangements

1 reference

https://pubmed.ncbi.nlm.nih.gov/16340004

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Extrusion of an imperfect palindrome to a cruciform in superhelical DNA: complete determination of energetics using a statistical mechanical model

1 reference

https://pubmed.ncbi.nlm.nih.gov/16340004

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Sequencing with the large fragment of DNA polymerase I fromBacillus stearothermophilus

1 reference

https://pubmed.ncbi.nlm.nih.gov/16340004

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

A study of the origin of 'shadow bands' seen when typing dinucleotide repeat polymorphisms by the PCR

1 reference

https://pubmed.ncbi.nlm.nih.gov/16340004

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Replication strand preference for deletions associated with DNA palindromes

1 reference

https://pubmed.ncbi.nlm.nih.gov/16340004

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1093/NAR/GNI189

1 reference

Europe PubMed Central

PubMed publication ID

5 July 2017

OpenCitations bibliographic resource ID

1 reference

Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

PMC publication ID

1 reference

Europe PubMed Central

PubMed publication ID

5 July 2017

PubMed publication ID

1 reference

Europe PubMed Central

PubMed publication ID

5 July 2017

ResearchGate publication ID

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