(Q24815150)

English

Testing for adaptive evolution of the female reproductive protein ZPC in mammals, birds and fishes reveals problems with the M7-M8 likelihood ratio test

scientific article

In more languages

default values for all languages

No label defined

No description defined

Statements

scholarly article

1 reference

Europe PubMed Central

PubMed publication ID

5 July 2017

Testing for adaptive evolution of the female reproductive protein ZPC in mammals, birds and fishes reveals problems with the M7-M8 likelihood ratio test (English)

1 reference

Europe PubMed Central

PubMed publication ID

5 July 2017

protein evolution

0 references

adaptive evolution

1 reference

based on heuristic

inferred from title

author name string

Sofia Berlin

1

1 reference

Europe PubMed Central

PubMed publication ID

5 July 2017

Nick G C Smith

2

1 reference

Europe PubMed Central

PubMed publication ID

5 July 2017

language of work or name

0 references

publication date

10 November 2005

1 reference

Europe PubMed Central

PubMed publication ID

5 July 2017

BMC Evolutionary Biology

1 reference

Europe PubMed Central

PubMed publication ID

5 July 2017

5

1 reference

Europe PubMed Central

PubMed publication ID

5 July 2017

1

0 references

65

1 reference

Europe PubMed Central

PubMed publication ID

5 July 2017

Hitchhiking under positive Darwinian selection

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1308811

7 April 2017

Gapped BLAST and PSI-BLAST: a new generation of protein database search programs

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1308811

7 April 2017

CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1308811

7 April 2017

A test of neutral molecular evolution based on nucleotide data

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1308811

7 April 2017

Statistical method for testing the neutral mutation hypothesis by DNA polymorphism

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1308811

7 April 2017

Codon-substitution models for heterogeneous selection pressure at amino acid sites

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1308811

7 April 2017

MrBayes 3: Bayesian phylogenetic inference under mixed models

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1308811

7 April 2017

PAML: a program package for phylogenetic analysis by maximum likelihood

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1308811

7 April 2017

Estimation of the number of nucleotide substitutions in the control region of mitochondrial DNA in humans and chimpanzees

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1308811

7 April 2017

A profile of fertilization in mammals

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1308811

7 April 2017

Adaptive protein evolution at the Adh locus in Drosophila

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1308811

7 April 2017

Bayes empirical bayes inference of amino acid sites under positive selection

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1308811

7 April 2017

Molecules consolidate the placental mammal tree

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1308811

7 April 2017

The rapid evolution of reproductive proteins

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1308811

7 April 2017

DnaSP version 3: an integrated program for molecular population genetics and molecular evolution analysis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1308811

7 April 2017

Likelihood models for detecting positively selected amino acid sites and applications to the HIV-1 envelope gene

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1308811

7 April 2017

Accuracy and power of statistical methods for detecting adaptive evolution in protein coding sequences and for identifying positively selected sites

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1308811

28 September 2017

Reduced variation on the chicken Z chromosome

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1308811

28 September 2017

Modeling linkage disequilibrium and identifying recombination hotspots using single-nucleotide polymorphism data

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1308811

28 September 2017

Evolution and nomenclature of the zona pellucida gene family

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1308811

28 September 2017

Phylogeny of Tetraoninae and other galliform birds using mitochondrial 12S and ND2 genes.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1308811

28 September 2017

Positive Darwinian selection drives the evolution of several female reproductive proteins in mammals

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1308811

28 September 2017

The major chicken egg envelope protein ZP1 is different from ZPB and is synthesized in the liver

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1308811

28 September 2017

Rapid evolution of male reproductive genes in the descent of man.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1308811

28 September 2017

cDNA cloning and sequence analysis of the Xenopus laevis egg envelope glycoprotein gp43.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1308811

28 September 2017

Rates of protein evolution are positively correlated with developmental timing of expression during mouse spermatogenesis.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1308811

28 November 2018

Bayesian estimation of positively selected sites

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1308811

28 November 2018

Species specificity in avian sperm:perivitelline interaction

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1308811

28 November 2018

False-positive selection identified by ML-based methods: examples from the Sig1 gene of the diatom Thalassiosira weissflogii and the tax gene of a human T-cell lymphotropic virus

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1308811

28 November 2018

Positive selection at reproductive ADAM genes with potential intercellular binding activity

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1308811

28 November 2018

Simulation study of the reliability and robustness of the statistical methods for detecting positive selection at single amino acid sites

1 reference

https://pubmed.ncbi.nlm.nih.gov/16283938

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Mammalian sperm proteins are rapidly evolving: evidence of positive selection in functionally diverse genes

1 reference

https://pubmed.ncbi.nlm.nih.gov/16283938

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Changes in the chorion and sperm entry into the micropyle during fertilization in the teleostean fish, Oryzias latipes

1 reference

https://pubmed.ncbi.nlm.nih.gov/16283938

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Pervasive adaptive evolution in mammalian fertilization proteins

1 reference

https://pubmed.ncbi.nlm.nih.gov/16283938

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Evidence for substantial fine-scale variation in recombination rates across the human genome

1 reference

https://pubmed.ncbi.nlm.nih.gov/16283938

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Accuracy and power of the likelihood ratio test in detecting adaptive molecular evolution

1 reference

https://pubmed.ncbi.nlm.nih.gov/16283938

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Tests for positive selection on immune and reproductive genes in closely related species of the murine genus mus

1 reference

https://pubmed.ncbi.nlm.nih.gov/16283938

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1186/1471-2148-5-65

1 reference

Europe PubMed Central

PubMed publication ID

5 July 2017

Dimensions Publication ID

1 reference

9 September 2019

https://scigraph.springernature.com/pub.10.1186/1471-2148-5-65

PMC publication ID

1 reference

Europe PubMed Central

PubMed publication ID

5 July 2017

PubMed publication ID

1 reference

Europe PubMed Central

PubMed publication ID

5 July 2017

ResearchGate publication ID

0 references

Sitelinks

Wikipedia(0 entries)

Wikibooks(0 entries)

Wikinews(0 entries)

Wikiquote(0 entries)

Wikisource(0 entries)

Wikiversity(0 entries)

Wikivoyage(0 entries)

Wiktionary(0 entries)

Multilingual sites(0 entries)

Retrieved from "https://www.wikidata.org/w/index.php?title=Q24815150&oldid=2177036393"