(Q25257467)

6 July 2017

title

Selection of primer-template sequences that bind human immunodeficiency virus reverse transcriptase with high affinity (English)

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6 July 2017

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Jeffrey J DeStefano

1

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6 July 2017

Jason V Cristofaro

series ordinal

2

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6 July 2017

language of work or name

English

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publication date

5 January 2006

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6 July 2017

published in

Nucleic Acids Research

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6 July 2017

volume

34

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6 July 2017

issue

1

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6 July 2017

page(s)

130-139

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Structure of a covalently trapped catalytic complex of HIV-1 reverse transcriptase: implications for drug resistance

6 July 2017

cites work

1 reference

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Alternating and non-alternating dG-dC hexanucleotides crystallize as canonical A-DNA

7 April 2017

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Molecular structure of the octamer d(G-G-C-C-G-G-C-C): modified A-DNA

7 April 2017

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The crystal structure of d(CCCCGGGG): a new A-form variant with an extended backbone conformation

7 April 2017

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Systematic evolution of ligands by exponential enrichment: RNA ligands to bacteriophage T4 DNA polymerase

7 April 2017

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In vitro selection of RNA molecules that bind specific ligands

7 April 2017

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Crystal structure of human immunodeficiency virus type 1 reverse transcriptase complexed with double-stranded DNA at 3.0 A resolution shows bent DNA

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1325207

Aptamers directed to HIV-1 reverse transcriptase display greater efficacy over small hairpin RNAs targeted to viral RNA in blocking HIV-1 replication

7 April 2017

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'Binding, bending and bonding': polypurine tract-primed initiation of plus-strand DNA synthesis in human immunodeficiency virus

28 September 2017

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Anti-HIV inhibitors based on nucleic acids: emergence of aptamers as potent antivirals

28 September 2017

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Mutations in the ribonuclease H active site of HIV-RT reveal a role for this site in stabilizing enzyme-primer-template binding

28 September 2017

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Potent inhibition of human immunodeficiency virus type 1 replication by template analog reverse transcriptase inhibitors derived by SELEX (systematic evolution of ligands by exponential enrichment).

28 September 2017

1 reference

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Aptamers as therapeutic and diagnostic agents

28 September 2017

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Refined model for primer/template binding by HIV-1 reverse transcriptase: pre-steady-state kinetic analyses of primer/template binding and nucleotide incorporation events distinguish between different binding modes depending on the nature of the nuc

28 September 2017

1 reference

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Phenotypic mechanism of HIV-1 resistance to 3'-azido-3'-deoxythymidine (AZT): increased polymerization processivity and enhanced sensitivity to pyrophosphate of the mutant viral reverse transcriptase

28 September 2017

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Oligo[d(C).(G)] runs exhibit a helical repeat of 11.1 bp in solution and cause slight DNA curvature when properly phased

28 September 2017

1 reference

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Determinants of the RNase H cleavage specificity of human immunodeficiency virus reverse transcriptase

28 September 2017

1 reference

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High-affinity ssDNA inhibitors of the reverse transcriptase of type 1 human immunodeficiency virus

28 September 2017

1 reference

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An expanded model of replicating human immunodeficiency virus reverse transcriptase

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1325207

Selection of high-affinity RNA ligands to reverse transcriptase: inhibition of cDNA synthesis and RNase H activity

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1325207

Use of an oligoribonucleotide containing the polypurine tract sequence as a primer by HIV reverse transcriptase

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1325207

The orientation of binding of human immunodeficiency virus reverse transcriptase on nucleic acid hybrids

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1325207

RNA pseudoknots that inhibit human immunodeficiency virus type 1 reverse transcriptase

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1325207

On the flexibility of the boundaries between the A-form and B-form sections in DNA molecule

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1325207

The SELEX process: a surprising source of therapeutic and diagnostic compounds

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1325207

The structure of HIV-1 reverse transcriptase complexed with an RNA pseudoknot inhibitor

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1325207

Structural and functional insights provided by crystal structures of DNA polymerases and their substrate complexes.

31 May 2018

1 reference

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Kinetic mechanism of the DNA-dependent DNA polymerase activity of human immunodeficiency virus reverse transcriptase

31 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1325207

The B to A transition of DNA in solution

31 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1325207

Amplification, mutation and selection of catalytic RNA.

31 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1325207

Comparison of HIV-1 and avian myeloblastosis virus reverse transcriptase fidelity on RNA and DNA templates

31 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1325207

Parameters that influence the binding of human immunodeficiency virus reverse transcriptase to nucleic acid structures

31 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1325207

CC/GG contacts facilitate the B to A transition of DNA in solution

28 November 2018

1 reference

12 December 2020

Mechanism of DNA Strand Transfer Reactions Catalyzed by HIV-1 Reverse Transcriptase

1 reference

12 December 2020

Physical mapping of HIV reverse transcriptase to the 5' end of RNA primers

1 reference

12 December 2020

A-Tract Polarity Dominate the Curvature in Flanking Sequences†

1 reference

12 December 2020

Structural parameters of single and double stranded helical polyribonucleotides

1 reference

12 December 2020

The K65R mutation confers increased DNA polymerase processivity to HIV-1 reverse transcriptase

1 reference

12 December 2020

DNA polymerases on the move

1 reference

12 December 2020

Identifiers

DOI

10.1093/NAR/GKJ426

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6 July 2017

1 reference

6 July 2017

1 reference