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The extended pluripotency protein interactome and its links to reprogramming
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scholarly article
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PubMed
title
The extended pluripotency protein interactome and its links to reprogramming
(English)
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main subject
pluripotency
1 reference
based on heuristic
inferred from title
author name string
Xin Huang
series ordinal
1
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stated in
Crossref
Jianlong Wang
series ordinal
2
1 reference
stated in
Crossref
language of work or name
English
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stated in
PubMed
publication date
October 2014
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stated in
PubMed
published in
Current Opinion in Genetics & Development
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stated in
PubMed
volume
28
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stated in
PubMed
page(s)
16-24
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stated in
PubMed
cites work
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TET2 and TET3 regulate GlcNAcylation and H3K4 methylation through OGT and SET1/COMPASS
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Tet proteins connect the O-linked N-acetylglucosamine transferase Ogt to chromatin in embryonic stem cells
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21 March 2017
A DNA repair complex functions as an Oct4/Sox2 coactivator in embryonic stem cells
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A unique Oct4 interface is crucial for reprogramming to pluripotency
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An expanded Oct4 interaction network: implications for stem cell biology, development, and disease
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21 March 2017
An Oct4-centered protein interaction network in embryonic stem cells
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A protein interaction network for pluripotency of embryonic stem cells
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Control of developmental regulators by Polycomb in human embryonic stem cells
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21 March 2017
A direct physical interaction between Nanog and Sox2 regulates embryonic stem cell self-renewal
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21 March 2017
Wdr5 mediates self-renewal and reprogramming via the embryonic stem cell core transcriptional network
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21 March 2017
A Myc network accounts for similarities between embryonic stem and cancer cell transcription programs
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Jumonji modulates polycomb activity and self-renewal versus differentiation of stem cells
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21 March 2017
A positive regulatory role for the mSin3A-HDAC complex in pluripotency through Nanog and Sox2
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PubMed Central
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21 March 2017
Esrrb is a direct Nanog target gene that can substitute for Nanog function in pluripotent cells
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PubMed Central
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21 March 2017
Zfp281 mediates Nanog autorepression through recruitment of the NuRD complex and inhibits somatic cell reprogramming
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PubMed Central
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21 March 2017
TET1 and hydroxymethylcytosine in transcription and DNA methylation fidelity
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PubMed Central
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21 March 2017
Estrogen-related receptor beta interacts with Oct4 to positively regulate Nanog gene expression
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PubMed Central
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21 March 2017
Quantitative expression of Oct-3/4 defines differentiation, dedifferentiation or self-renewal of ES cells
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PubMed Central
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21 March 2017
Integration of external signaling pathways with the core transcriptional network in embryonic stem cells
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PubMed Central
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7 April 2017
Genetic engineering of human pluripotent cells using TALE nucleases
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PubMed Central
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7 April 2017
Naive and primed pluripotent states
1 reference
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PubMed Central
reference URL
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7 April 2017
Induction of pluripotent stem cells by defined factors is greatly improved by small-molecule compounds
1 reference
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4262598
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7 April 2017
Efficient targeting of expressed and silent genes in human ESCs and iPSCs using zinc-finger nucleases
1 reference
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PubMed Central
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7 April 2017
MBD3/NuRD facilitates induction of pluripotency in a context-dependent manner
1 reference
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PubMed Central
reference URL
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28 September 2017
Differential regulation of the ten-eleven translocation (TET) family of dioxygenases by O-linked β-N-acetylglucosamine transferase (OGT).
1 reference
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PubMed Central
reference URL
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28 September 2017
Deterministic direct reprogramming of somatic cells to pluripotency
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4262598
retrieved
28 September 2017
Ten-eleven translocation 1 (Tet1) is regulated by O-linked N-acetylglucosamine transferase (Ogt) for target gene repression in mouse embryonic stem cells
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4262598
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28 September 2017
Mechanisms and models of somatic cell reprogramming
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4262598
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28 September 2017
Wnt3a-dependent and -independent protein interaction networks of chromatin-bound β-catenin in mouse embryonic stem cells.
1 reference
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4262598
retrieved
28 September 2017
NuRD blocks reprogramming of mouse somatic cells into pluripotent stem cells
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4262598
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28 September 2017
Noncoding RNA and Polycomb recruitment.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4262598
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28 September 2017
NANOG-dependent function of TET1 and TET2 in establishment of pluripotency
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4262598
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28 September 2017
A molecular roadmap of reprogramming somatic cells into iPS cells
1 reference
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PubMed Central
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28 September 2017
Embryonic stem cell interactomics: the beginning of a long road to biological function
1 reference
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PubMed Central
reference URL
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28 September 2017
NuRD suppresses pluripotency gene expression to promote transcriptional heterogeneity and lineage commitment
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4262598
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28 September 2017
Reprogramming cellular identity for regenerative medicine
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4262598
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28 September 2017
SRY (sex determining region Y)-box2 (Sox2)/poly ADP-ribose polymerase 1 (Parp1) complexes regulate pluripotency
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4262598
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28 September 2017
Determination of protein interactome of transcription factor Sox2 in embryonic stem cells engineered for inducible expression of four reprogramming factors.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4262598
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28 September 2017
Enhancer decommissioning by LSD1 during embryonic stem cell differentiation
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4262598
retrieved
28 September 2017
Sin3a is essential for the genome integrity and viability of pluripotent cells
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4262598
retrieved
28 September 2017
Oct4 links multiple epigenetic pathways to the pluripotency network
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4262598
retrieved
28 September 2017
Chromatin connections to pluripotency and cellular reprogramming
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4262598
retrieved
28 September 2017
Polycomb repressive complex 2 is necessary for the normal site-specific O-GlcNAc distribution in mouse embryonic stem cells
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4262598
retrieved
28 September 2017
Progress in understanding reprogramming to the induced pluripotent state
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4262598
retrieved
28 September 2017
Proteomic analysis of Sox2-associated proteins during early stages of mouse embryonic stem cell differentiation identifies Sox21 as a novel regulator of stem cell fate.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4262598
retrieved
28 September 2017
Chromatin-Remodeling Components of the BAF Complex Facilitate Reprogramming
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4262598
retrieved
28 September 2017
Systems-level dynamic analyses of fate change in murine embryonic stem cells
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4262598
retrieved
28 September 2017
An embryonic stem cell chromatin remodeling complex, esBAF, is essential for embryonic stem cell self-renewal and pluripotency
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4262598
retrieved
28 September 2017
An embryonic stem cell chromatin remodeling complex, esBAF, is an essential component of the core pluripotency transcriptional network.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4262598
retrieved
28 September 2017
Capturing pluripotency
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4262598
retrieved
28 September 2017
Successful co-immunoprecipitation of Oct4 and Nanog using cross-linking
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4262598
retrieved
28 September 2017
An RNAi screen of chromatin proteins identifies Tip60-p400 as a regulator of embryonic stem cell identity.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4262598
retrieved
31 May 2018
Transient activation of autophagy via Sox2-mediated suppression of mTOR is an important early step in reprogramming to pluripotency
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4262598
retrieved
28 November 2018
Identifying specific protein-DNA interactions using SILAC-based quantitative proteomics.
1 reference
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4262598
retrieved
28 November 2018
DNA-dependent Oct4-Sox2 interaction and diffusion properties characteristic of the pluripotent cell state revealed by fluorescence spectroscopy.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4262598
retrieved
28 November 2018
O-GlcNAc regulates pluripotency and reprogramming by directly acting on core components of the pluripotency network
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4262598
retrieved
28 November 2018
Reprogramming of fibroblasts into induced pluripotent stem cells with orphan nuclear receptor Esrrb.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4262598
retrieved
28 November 2018
Nanog and Oct4 associate with unique transcriptional repression complexes in embryonic stem cells
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/25173149
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
Identifiers
DOI
10.1016/J.GDE.2014.08.003
1 reference
stated in
Consolidated OpenCitations Corpus – April 2017
OpenCitations bibliographic resource ID
2905749
OpenCitations bibliographic resource ID
2905749
1 reference
stated in
Consolidated OpenCitations Corpus – April 2017
OpenCitations bibliographic resource ID
2905749
PMC publication ID
4262598
1 reference
stated in
Consolidated OpenCitations Corpus – April 2017
OpenCitations bibliographic resource ID
2905749
PubMed publication ID
25173149
1 reference
stated in
Consolidated OpenCitations Corpus – April 2017
OpenCitations bibliographic resource ID
2905749
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