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Viral surveillance and discovery
scientific article
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instance of
scholarly article
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stated in
PubMed
title
Viral surveillance and discovery
(English)
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author
Cadhla Firth
series ordinal
2
0 references
W. Ian Lipkin
series ordinal
1
0 references
language of work or name
English
1 reference
stated in
PubMed
publication date
April 2013
1 reference
stated in
PubMed
published in
Current opinion in virology
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stated in
PubMed
volume
3
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stated in
PubMed
issue
2
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stated in
PubMed
page(s)
199-204
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stated in
PubMed
cites work
The changing face of pathogen discovery and surveillance
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4310698
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21 March 2017
Serology-enabled discovery of genetically diverse hepaciviruses in a new host
1 reference
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PubMed Central
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21 March 2017
Distant Mimivirus relative with a larger genome highlights the fundamental features of Megaviridae
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4310698
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21 March 2017
Open-Source Genomic Analysis of Shiga-Toxin–Producing E. coli O104:H4
1 reference
stated in
PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4310698
retrieved
21 March 2017
Genome sequence analyses of two isolates from the recent Escherichia coli outbreak in Germany reveal the emergence of a new pathotype: Entero-Aggregative-Haemorrhagic Escherichia coli (EAHEC)
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4310698
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21 March 2017
Comparative fecal metagenomics unveils unique functional capacity of the swine gut
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4310698
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21 March 2017
Viruses and Koch's Postulates
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4310698
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21 March 2017
Sequence-based identification of microbial pathogens: a reconsideration of Koch's postulates
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4310698
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21 March 2017
Cross-Species Virus Transmission and the Emergence of New Epidemic Diseases
1 reference
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4310698
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21 March 2017
The Role of Pathology in an Investigation of an Outbreak of West Nile Encephalitis in New York, 1999
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4310698
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21 March 2017
Sequencing technologies - the next generation
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4310698
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21 March 2017
Microbe Hunting
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PubMed Central
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21 March 2017
Identification of a Kunjin/West Nile-like flavivirus in brains of patients with New York encephalitis
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4310698
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21 March 2017
Merkel cell carcinoma: recent insights and new treatment options
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PubMed Central
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21 March 2017
Emerging nanotechnology-based strategies for the identification of microbial pathogenesis
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PubMed Central
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21 March 2017
Characterization of the reconstructed 1918 Spanish influenza pandemic virus
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4310698
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21 March 2017
Transgenic mice expressing a human poliovirus receptor: a new model for poliomyelitis
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4310698
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21 March 2017
Metagenome plasticity of the bovine abomasal microbiota in immune animals in response to Ostertagia ostertagi infection
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4310698
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21 March 2017
HealthMap: global infectious disease monitoring through automated classification and visualization of Internet media reports
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4310698
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21 March 2017
Eilat virus, a unique alphavirus with host range restricted to insects by RNA replication
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4310698
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7 April 2017
Rapid pneumococcal evolution in response to clinical interventions
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4310698
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7 April 2017
Substantial biases in ultra-short read data sets from high-throughput DNA sequencing
1 reference
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4310698
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7 April 2017
Localization of pandemic 2009 H1N1 influenza A virus RNA in lung and lymph nodes of fatal influenza cases by in situ hybridization: new insights on virus replication and pathogenesis
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28 September 2017
Characterization of the fecal microbiota using high-throughput sequencing reveals a stable microbial community during storage
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PubMed Central
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28 September 2017
Chinese highly pathogenic porcine reproductive and respiratory syndrome virus exhibits more extensive tissue tropism for pigs
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PubMed Central
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28 September 2017
Emergence of fatal avian influenza in New England harbor seals
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PubMed Central
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28 September 2017
Performance comparison of benchtop high-throughput sequencing platforms
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4310698
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28 September 2017
Metagenomics and future perspectives in virus discovery.
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4310698
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28 September 2017
Integrated nanopore sensing platform with sub-microsecond temporal resolution
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PubMed Central
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28 September 2017
Burkitt's lymphoma
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4310698
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28 September 2017
Microarrays for pathogen detection and analysis
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4310698
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28 September 2017
The fecal virome of pigs on a high-density farm.
1 reference
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4310698
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28 September 2017
Immunity to dengue virus: a tale of original antigenic sin and tropical cytokine storms
1 reference
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4310698
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28 September 2017
Advances in the diagnosis of respiratory tract infections: role of the Luminex xTAG respiratory viral panel
1 reference
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4310698
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28 September 2017
Novel picornavirus in Turkey poults with hepatitis, California, USA
1 reference
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4310698
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28 September 2017
Analyzing and minimizing PCR amplification bias in Illumina sequencing libraries
1 reference
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4310698
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28 September 2017
LIPS arrays for simultaneous detection of antibodies against partial and whole proteomes of HCV, HIV and EBV.
1 reference
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4310698
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28 September 2017
Integrated capillary electrophoresis microsystem for multiplex analysis of human respiratory viruses
1 reference
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4310698
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28 September 2017
Optimization of protocol for sequencing of difficult templates
1 reference
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4310698
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28 September 2017
Emerging viruses in transplantation
1 reference
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4310698
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28 September 2017
High-throughput DNA sequencing--concepts and limitations
1 reference
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4310698
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28 September 2017
Metagenomics for the discovery of novel human viruses
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4310698
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28 September 2017
Cancer and viral infections in immunocompromised individuals
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28 September 2017
Amplification-free Illumina sequencing-library preparation facilitates improved mapping and assembly of (G+C)-biased genomes
1 reference
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PubMed Central
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28 September 2017
Multiplex MassTag-PCR for respiratory pathogens in pediatric nasopharyngeal washes negative by conventional diagnostic testing shows a high prevalence of viruses belonging to a newly recognized rhinovirus clade
1 reference
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PubMed Central
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28 September 2017
A new arenavirus in a cluster of fatal transplant-associated diseases
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PubMed Central
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28 September 2017
Simultaneous detection and high-throughput identification of a panel of RNA viruses causing respiratory tract infections
1 reference
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4310698
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28 September 2017
Using a resequencing microarray as a multiple respiratory pathogen detection assay.
1 reference
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PubMed Central
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28 September 2017
Simultaneous amplification and identification of 25 human papillomavirus types with Templex technology
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28 September 2017
Transmission of lymphocytic choriomeningitis virus by organ transplantation
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PubMed Central
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28 September 2017
Mice transgenic for a human porcine endogenous retrovirus receptor are susceptible to productive viral infection
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PubMed Central
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28 September 2017
Induction of sterilizing immunity against West Nile Virus (WNV), by immunization with WNV-like particles produced in insect cells
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4310698
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28 September 2017
Recent advances in peptide-based microarray technologies
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28 September 2017
Tracking the evolution of the SARS coronavirus using high-throughput, high-density resequencing arrays
1 reference
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PubMed Central
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28 September 2017
Diseases of humans and their domestic mammals: pathogen characteristics, host range and the risk of emergence
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28 September 2017
Outbreak of West Nile-like viral encephalitis--New York, 1999.
1 reference
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PubMed Central
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28 September 2017
Genetic identification of a hantavirus associated with an outbreak of acute respiratory illness
1 reference
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PubMed Central
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28 September 2017
Viral haemorrhagic fever in southern Sudan and northern Zaire. Preliminary studies on the aetiological agent
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28 September 2017
Automated forward and reverse ratcheting of DNA in a nanopore at 5-Ă… precision
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PubMed Central
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31 May 2018
Evidence from multiplex molecular assays for complex multipathogen interactions in acute respiratory infections
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31 May 2018
MultiCode-PLx system for multiplexed detection of seventeen respiratory viruses.
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31 May 2018
Development of a respiratory virus panel test for detection of twenty human respiratory viruses by use of multiplex PCR and a fluid microbead-based assay
1 reference
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PubMed Central
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31 May 2018
Diagnosis of a critical respiratory illness caused by human metapneumovirus by use of a pan-virus microarray
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31 May 2018
ProMED-mail: an early warning system for emerging diseases
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31 May 2018
Detection of enteroviral RNA and specific DNA of herpesviruses by multiplex genome amplification.
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31 May 2018
Effective replication of human influenza viruses in mice lacking a major α2,6 sialyltransferase
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28 November 2018
Diagnosis of human respiratory syncytial virus infection using reverse transcription loop-mediated isothermal amplification
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28 November 2018
Microarray detection of human parainfluenzavirus 4 infection associated with respiratory failure in an immunocompetent adult
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28 November 2018
Direct screening of clinical specimens for multiple respiratory pathogens using the Genaco Respiratory Panels 1 and 2.
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28 November 2018
Emerging pathogens: the epidemiology and evolution of species jumps
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28 November 2018
The Global Public Health Intelligence Network and early warning outbreak detection: a Canadian contribution to global public health.
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28 November 2018
Autoantigen microarrays for multiplex characterization of autoantibody responses
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28 November 2018
Genome sequencing in clinical microbiology
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PubMed
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https://pubmed.ncbi.nlm.nih.gov/23602435
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12 December 2020
based on heuristic
inferred from PubMed ID database lookup
Accurate and sensitive diagnosis of geminiviruses through enrichment, high-throughput sequencing and automated sequence identification
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/23602435
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
Human papillomavirus and cervical cancer
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/23602435
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12 December 2020
based on heuristic
inferred from PubMed ID database lookup
Detection of enterovirus in the thyroid tissue of patients with graves' disease
1 reference
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PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/23602435
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
Identifiers
DOI
10.1016/J.COVIRO.2013.03.010
0 references
PMC publication ID
4310698
1 reference
stated in
PubMed
PubMed publication ID
23602435
1 reference
stated in
PubMed
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