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(Q27548516)
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ATP-dependent RNA helicase DBP8 YHR169W
fungal protein found in Saccharomyces cerevisiae S288c
DBP8
YHR169W
ATP-dependent RNA helicase DBP8
In more languages
edit
Statements
instance of
protein
1 reference
stated in
UniProt
retrieved
25 May 2022
UniProt protein ID
P38719
subclass of
protein
1 reference
stated in
NCBI Gene
retrieved
10 December 2016
Entrez Gene ID
856574
part of
P-loop containing nucleoside triphosphate hydrolase
1 reference
stated in
InterPro Release 71.0
reference URL
http://www.ebi.ac.uk/interpro/protein/P38719
Helicase superfamily 1/2, ATP-binding domain, protein family
1 reference
based on heuristic
inferred from protein domain or family
Helicase, C-terminal domain, protein family
1 reference
based on heuristic
inferred from protein domain or family
DEAD/DEAH box helicase
1 reference
based on heuristic
inferred from protein domain or family
RNA helicase, DEAD-box type, Q motif, protein family
1 reference
based on heuristic
inferred from protein domain or family
found in taxon
Saccharomyces cerevisiae S288c
1 reference
stated in
UniProt
retrieved
25 May 2022
UniProt protein ID
P38719
encoded by
DBP8
1 reference
stated in
UniProt
retrieved
25 May 2022
UniProt protein ID
P38719
molecular function
ATPase activity
determination method
IDA
1 reference
retrieved
9 May 2019
stated in
The nucleolar protein Esf2 interacts directly with the DExD/H box RNA helicase, Dbp8, to stimulate ATP hydrolysis
GOA
curator
SGD
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P38719
determination method
IDA
helicase activity
determination method
IEA
1 reference
retrieved
9 May 2019
stated in
GOA
curator
UniProt
UniProt protein ID
P38719
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P38719
determination method
IEA
RNA binding
determination method
IEA
1 reference
retrieved
9 May 2019
stated in
GOA
curator
UniProt
UniProt protein ID
P38719
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P38719
determination method
IEA
hydrolase activity
determination method
IEA
1 reference
retrieved
9 May 2019
stated in
GOA
curator
UniProt
UniProt protein ID
P38719
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P38719
determination method
IEA
nucleic acid binding
determination method
IEA
1 reference
retrieved
9 May 2019
stated in
GOA
curator
InterPro
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P38719
determination method
IEA
ATP binding
determination method
IEA
2 references
retrieved
9 May 2019
stated in
GOA
curator
UniProt
UniProt protein ID
P38719
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P38719
determination method
IEA
retrieved
9 May 2019
stated in
GOA
curator
InterPro
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P38719
determination method
IEA
nucleotide binding
determination method
IEA
1 reference
retrieved
9 May 2019
stated in
GOA
curator
UniProt
UniProt protein ID
P38719
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P38719
determination method
IEA
protein binding
determination method
IPI
2 references
retrieved
9 May 2019
stated in
The SSU processome interactome in Saccharomyces cerevisiae reveals novel protein subcomplexes
GOA
curator
IntAct protein interaction database
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P38719
determination method
IPI
retrieved
9 May 2019
stated in
Assigning function to yeast proteins by integration of technologies.
GOA
curator
IntAct protein interaction database
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P38719
determination method
IPI
cell component
nucleolus
determination method
IDA
IEA
2 references
retrieved
9 May 2019
stated in
GOA
curator
UniProt
UniProt protein ID
P38719
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P38719
determination method
IEA
retrieved
9 May 2019
stated in
Characterization and mutational analysis of yeast Dbp8p, a putative RNA helicase involved in ribosome biogenesis
GOA
curator
SGD
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P38719
determination method
IDA
nucleus
determination method
IEA
1 reference
retrieved
9 May 2019
stated in
GOA
curator
UniProt
UniProt protein ID
P38719
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P38719
determination method
IEA
nucleoplasm
determination method
TAS
1 reference
retrieved
9 May 2019
stated in
GOA
curator
Reactome
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P38719
determination method
TAS
cytoplasm
determination method
IBA
1 reference
retrieved
27 March 2018
stated in
GOA
curator
GO Central
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?protein=P38719&geneProductId=UniProtKB:P38719
determination method
IBA
90S preribosome
determination method
HDA
1 reference
retrieved
9 May 2019
stated in
90S pre-ribosomes include the 35S pre-rRNA, the U3 snoRNP, and 40S subunit processing factors but predominantly lack 60S synthesis factors
GOA
curator
SGD
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P38719
determination method
HDA
biological process
endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
determination method
IMP
1 reference
retrieved
9 May 2019
stated in
Characterization and mutational analysis of yeast Dbp8p, a putative RNA helicase involved in ribosome biogenesis
GOA
curator
SGD
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P38719
determination method
IMP
endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
determination method
IMP
1 reference
retrieved
9 May 2019
stated in
Characterization and mutational analysis of yeast Dbp8p, a putative RNA helicase involved in ribosome biogenesis
GOA
curator
SGD
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P38719
determination method
IMP
RNA secondary structure unwinding
determination method
IBA
1 reference
retrieved
27 March 2018
stated in
GOA
curator
GO Central
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?protein=P38719&geneProductId=UniProtKB:P38719
determination method
IBA
rRNA processing
determination method
IEA
1 reference
retrieved
9 May 2019
stated in
GOA
curator
UniProt
UniProt protein ID
P38719
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P38719
determination method
IEA
ribosome biogenesis
determination method
IEA
1 reference
retrieved
9 May 2019
stated in
GOA
curator
UniProt
UniProt protein ID
P38719
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P38719
determination method
IEA
endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
determination method
IMP
1 reference
retrieved
9 May 2019
stated in
Characterization and mutational analysis of yeast Dbp8p, a putative RNA helicase involved in ribosome biogenesis
GOA
curator
SGD
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P38719
determination method
IMP
rRNA methylation
determination method
TAS
1 reference
retrieved
9 May 2019
stated in
GOA
curator
Reactome
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P38719
determination method
TAS
has part(s)
DEAD/DEAH box helicase domain
1 reference
stated in
InterPro Release 71.0
reference URL
http://www.ebi.ac.uk/interpro/protein/P38719
Helicase, C-terminal
1 reference
stated in
InterPro Release 71.0
reference URL
http://www.ebi.ac.uk/interpro/protein/P38719
RNA helicase, DEAD-box type, Q motif
1 reference
stated in
InterPro Release 71.0
reference URL
http://www.ebi.ac.uk/interpro/protein/P38719
Helicase superfamily 1/2, ATP-binding domain
1 reference
stated in
InterPro Release 71.0
reference URL
http://www.ebi.ac.uk/interpro/protein/P38719
Identifiers
RefSeq protein ID
NP_012039
1 reference
stated in
NCBI Gene
retrieved
20 March 2022
Entrez Gene ID
856574
UniProt protein ID
P38719
1 reference
stated in
UniProt
retrieved
25 May 2022
UniProt protein ID
P38719
Ensembl protein ID
YHR169W
1 reference
stated in
ensembl Release 106
Ensembl protein ID
YHR169W
Saccharomyces Genome Database ID
S000001212
1 reference
stated in
NCBI Gene
retrieved
20 March 2022
Entrez Gene ID
856574
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