(Q27549206)

English

TRNA ligase YJL087C

fungal protein found in Saccharomyces cerevisiae S288c

YJL087C
TRL1
tRNA ligase

In more languages

Statements

1 reference

25 May 2022

UniProt protein ID

1 reference

19 January 2017

UniProt protein ID

tRNA ligase Trl1, fungi

1 reference

InterPro Release 71.0

http://www.ebi.ac.uk/interpro/protein/P09880

P-loop containing nucleoside triphosphate hydrolase

1 reference

InterPro Release 71.0

http://www.ebi.ac.uk/interpro/protein/P09880

tRNA ligase, kinase domain, fungi, protein family

1 reference

based on heuristic

inferred from protein domain or family

RNA ligase T4 Rnl1, N-terminal domain, protein family

1 reference

based on heuristic

inferred from protein domain or family

tRNA ligase, phosphodiesterase domain, protein family

1 reference

based on heuristic

inferred from protein domain or family

Saccharomyces cerevisiae S288c

1 reference

25 May 2022

UniProt protein ID

1 reference

25 May 2022

UniProt protein ID

molecular function

phosphoric diester hydrolase activity

determination method

1 reference

9 May 2019

http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P09880

determination method

2',3'-cyclic-nucleotide 3'-phosphodiesterase activity

determination method

1 reference

9 May 2019

Mechanism of action of a yeast RNA ligase in tRNA splicing

http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P09880

determination method

RNA ligase (ATP) activity

determination method

4 references

21 June 2018

UniProt protein ID

http://www.ebi.ac.uk/QuickGO/annotations?protein=P09880&geneProductId=UniProtKB:P09880

determination method

21 June 2018

http://www.ebi.ac.uk/QuickGO/annotations?protein=P09880&geneProductId=UniProtKB:P09880

determination method

21 June 2018

Structure and function of the yeast tRNA ligase gene

Saccharomyces Genome Database ID

http://www.ebi.ac.uk/QuickGO/annotations?protein=P09880&geneProductId=UniProtKB:P09880

determination method

21 June 2018

Saccharomyces cerevisiae tRNA ligase. Purification of the protein and isolation of the structural gene

Saccharomyces Genome Database ID

http://www.ebi.ac.uk/QuickGO/annotations?protein=P09880&geneProductId=UniProtKB:P09880

determination method

hydrolase activity

determination method

1 reference

9 May 2019

UniProt protein ID

http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P09880

determination method

nucleotide binding

determination method

1 reference

9 May 2019

UniProt protein ID

http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P09880

determination method

ligase activity

determination method

1 reference

9 May 2019

UniProt protein ID

http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P09880

determination method

catalytic activity

determination method

1 reference

9 May 2019

UniProt protein ID

http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P09880

determination method

nuclease activity

determination method

1 reference

9 May 2019

UniProt protein ID

http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P09880

determination method

transferase activity

determination method

1 reference

9 May 2019

UniProt protein ID

http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P09880

determination method

endonuclease activity

determination method

1 reference

9 May 2019

UniProt protein ID

http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P09880

determination method

kinase activity

determination method

1 reference

9 May 2019

UniProt protein ID

http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P09880

determination method

RNA ligase (ATP) activity

determination method

5 references

9 May 2019

UniProt protein ID

http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P09880

determination method

9 May 2019

http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P09880

determination method

9 May 2019

Structure and function of the yeast tRNA ligase gene

http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P09880

determination method

9 May 2019

Saccharomyces cerevisiae tRNA ligase. Purification of the protein and isolation of the structural gene

http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P09880

determination method

9 May 2019

Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium

http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P09880

determination method

nuclear inner membrane

determination method

1 reference

21 June 2018

The subnuclear localization of tRNA ligase in yeast

Saccharomyces Genome Database ID

http://www.ebi.ac.uk/QuickGO/annotations?protein=P09880&geneProductId=UniProtKB:P09880

determination method

determination method

1 reference

10 September 2018

Dual Functions of Yeast tRNA Ligase in the Unfolded Protein Response: Unconventional Cytoplasmic Splicing ofHAC1Pre-mRNA Is Not Sufficient to Release Translational Attenuation

http://www.ebi.ac.uk/QuickGO/annotations?protein=P09880&geneProductId=UniProtKB:P09880

determination method

determination method

1 reference

9 May 2019

Dual Functions of Yeast tRNA Ligase in the Unfolded Protein Response: Unconventional Cytoplasmic Splicing ofHAC1Pre-mRNA Is Not Sufficient to Release Translational Attenuation

http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P09880

determination method

biological process

positive regulation of translation in response to stress

determination method

2 references

5 June 2018

Dual Functions of Yeast tRNA Ligase in the Unfolded Protein Response: Unconventional Cytoplasmic Splicing ofHAC1Pre-mRNA Is Not Sufficient to Release Translational Attenuation

http://www.ebi.ac.uk/QuickGO/annotations?protein=P09880&geneProductId=UniProtKB:P09880

determination method

5 June 2018

Dual Functions of Yeast tRNA Ligase in the Unfolded Protein Response: Unconventional Cytoplasmic Splicing ofHAC1Pre-mRNA Is Not Sufficient to Release Translational Attenuation

http://www.ebi.ac.uk/QuickGO/annotations?protein=P09880&geneProductId=UniProtKB:P09880

determination method

determination method

1 reference

9 May 2019

UniProt protein ID

http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P09880

determination method

phosphorylation

determination method

1 reference

9 May 2019

UniProt protein ID

http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P09880

determination method

tRNA processing

determination method

1 reference

9 May 2019

UniProt protein ID

http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P09880

determination method

tRNA splicing, via endonucleolytic cleavage and ligation

determination method

3 references

21 June 2018

Yeast tRNA ligase mutants are nonviable and accumulate tRNA splicing intermediates

Saccharomyces Genome Database ID

http://www.ebi.ac.uk/QuickGO/annotations?protein=P09880&geneProductId=UniProtKB:P09880

determination method

21 June 2018

http://www.ebi.ac.uk/QuickGO/annotations?protein=P09880&geneProductId=UniProtKB:P09880

determination method

21 June 2018

Domain structure in yeast tRNA ligase

Saccharomyces Genome Database ID

http://www.ebi.ac.uk/QuickGO/annotations?protein=P09880&geneProductId=UniProtKB:P09880

determination method

nucleic acid phosphodiester bond hydrolysis

determination method

1 reference

9 May 2019

Gene Ontology Consortium

http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P09880

determination method

positive regulation of translation in response to stress

determination method

1 reference

9 May 2019

Dual Functions of Yeast tRNA Ligase in the Unfolded Protein Response: Unconventional Cytoplasmic Splicing ofHAC1Pre-mRNA Is Not Sufficient to Release Translational Attenuation

http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P09880

determination method

IRE1-mediated unfolded protein response

determination method

1 reference

9 May 2019

tRNA ligase is required for regulated mRNA splicing in the unfolded protein response

http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P09880

determination method

tRNA splicing, via endonucleolytic cleavage and ligation

determination method

4 references

9 May 2019

Yeast tRNA ligase mutants are nonviable and accumulate tRNA splicing intermediates

http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P09880

determination method

9 May 2019

http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P09880

determination method

9 May 2019

Domain structure in yeast tRNA ligase

http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P09880

determination method

9 May 2019

Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium

http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P09880

determination method

RNA ligase T4 Rnl1, N-terminal

1 reference

InterPro Release 71.0

http://www.ebi.ac.uk/interpro/protein/P09880

tRNA ligase, kinase domain, fungi

1 reference

InterPro Release 71.0

http://www.ebi.ac.uk/interpro/protein/P09880

tRNA ligase, phosphodiesterase domain

1 reference

InterPro Release 71.0

http://www.ebi.ac.uk/interpro/protein/P09880

Identifiers

RefSeq protein ID

1 reference

20 March 2022

UniProt protein ID

1 reference

25 May 2022

UniProt protein ID

Ensembl protein ID

1 reference

ensembl Release 106

Ensembl protein ID

Saccharomyces Genome Database ID

1 reference

20 March 2022

Sitelinks

Wikipedia(0 entries)

Wikibooks(0 entries)

Wikinews(0 entries)

Wikiquote(0 entries)

Wikisource(0 entries)

Wikiversity(0 entries)

Wikivoyage(0 entries)

Wiktionary(0 entries)

Multilingual sites(0 entries)

Retrieved from "https://www.wikidata.org/w/index.php?title=Q27549206&oldid=2026873402"