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Rrp5p YMR229C
fungal protein found in Saccharomyces cerevisiae S288c
YMR229C
Rrp5p
RRP5
In more languages
edit
Statements
instance of
protein
1 reference
stated in
UniProt
retrieved
25 May 2022
UniProt protein ID
Q05022
subclass of
protein
1 reference
stated in
NCBI Gene
retrieved
10 December 2016
Entrez Gene ID
855269
found in taxon
Saccharomyces cerevisiae S288c
1 reference
stated in
UniProt
retrieved
25 May 2022
UniProt protein ID
Q05022
encoded by
RRP5
1 reference
stated in
UniProt
retrieved
25 May 2022
UniProt protein ID
Q05022
molecular function
poly(U) RNA binding
determination method
IDA
1 reference
retrieved
9 May 2019
stated in
Rrp5p, a trans-acting factor in yeast ribosome biogenesis, is an RNA-binding protein with a pronounced preference for U-rich sequences
GOA
curator
SGD
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:Q05022
determination method
IDA
nucleic acid binding
determination method
IEA
1 reference
retrieved
9 May 2019
stated in
GOA
curator
InterPro
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:Q05022
determination method
IEA
protein binding
determination method
IPI
5 references
retrieved
9 May 2019
stated in
An in vivo map of the yeast protein interactome
GOA
curator
IntAct protein interaction database
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:Q05022
determination method
IPI
retrieved
9 May 2019
stated in
Rrp5 binding at multiple sites coordinates pre-rRNA processing and assembly
GOA
curator
IntAct protein interaction database
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:Q05022
determination method
IPI
retrieved
9 May 2019
stated in
90S pre-ribosomes include the 35S pre-rRNA, the U3 snoRNP, and 40S subunit processing factors but predominantly lack 60S synthesis factors
GOA
curator
IntAct protein interaction database
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:Q05022
determination method
IPI
retrieved
9 May 2019
stated in
A protein interaction map of the LSU processome
GOA
curator
IntAct protein interaction database
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:Q05022
determination method
IPI
retrieved
9 May 2019
stated in
Proteome survey reveals modularity of the yeast cell machinery
GOA
curator
IntAct protein interaction database
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:Q05022
determination method
IPI
snoRNA binding
determination method
IDA
1 reference
retrieved
9 May 2019
stated in
Rrp5 binding at multiple sites coordinates pre-rRNA processing and assembly
GOA
curator
SGD
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:Q05022
determination method
IDA
U3 snoRNA binding
determination method
IDA
1 reference
retrieved
9 May 2019
stated in
Rrp5 binding at multiple sites coordinates pre-rRNA processing and assembly
GOA
curator
SGD
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:Q05022
determination method
IDA
box C/D RNA binding
determination method
IDA
1 reference
retrieved
9 May 2019
stated in
Rrp5 binding at multiple sites coordinates pre-rRNA processing and assembly
GOA
curator
SGD
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:Q05022
determination method
IDA
box H/ACA snoRNA binding
determination method
IDA
1 reference
retrieved
9 May 2019
stated in
Rrp5 binding at multiple sites coordinates pre-rRNA processing and assembly
GOA
curator
SGD
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:Q05022
determination method
IDA
rRNA primary transcript binding
determination method
IDA
1 reference
retrieved
9 May 2019
stated in
Rrp5 binding at multiple sites coordinates pre-rRNA processing and assembly
GOA
curator
SGD
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:Q05022
determination method
IDA
mRNA binding
determination method
HDA
1 reference
retrieved
9 May 2019
stated in
Global analysis of yeast mRNPs
GOA
curator
SGD
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:Q05022
determination method
HDA
cell component
nucleus
determination method
IEA
1 reference
retrieved
9 May 2019
stated in
GOA
curator
UniProt
UniProt protein ID
Q05022
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:Q05022
determination method
IEA
nucleolus
determination method
IEA
IDA
2 references
retrieved
27 March 2018
stated in
GOA
curator
UniProt
UniProt protein ID
Q05022
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?protein=Q05022&geneProductId=UniProtKB:Q05022
determination method
IEA
retrieved
27 March 2018
stated in
RRP5 is required for formation of both 18S and 5.8S rRNA in yeast
GOA
curator
SGD
Saccharomyces Genome Database ID
S000004842
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?protein=Q05022&geneProductId=UniProtKB:Q05022
determination method
IDA
small-subunit processome
determination method
IDA
1 reference
retrieved
27 March 2018
stated in
A large nucleolar U3 ribonucleoprotein required for 18S ribosomal RNA biogenesis
GOA
curator
SGD
Saccharomyces Genome Database ID
S000004842
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?protein=Q05022&geneProductId=UniProtKB:Q05022
determination method
IDA
nucleoplasm
determination method
TAS
1 reference
retrieved
9 May 2019
stated in
GOA
curator
Reactome
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:Q05022
determination method
TAS
nucleolus
determination method
IBA
IDA
IEA
3 references
retrieved
10 September 2018
stated in
GOA
curator
UniProt
UniProt protein ID
Q05022
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?protein=Q05022&geneProductId=UniProtKB:Q05022
determination method
IEA
retrieved
10 September 2018
stated in
RRP5 is required for formation of both 18S and 5.8S rRNA in yeast
GOA
curator
SGD
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?protein=Q05022&geneProductId=UniProtKB:Q05022
determination method
IDA
retrieved
10 September 2018
stated in
Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium
GOA
curator
GO Central
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?protein=Q05022&geneProductId=UniProtKB:Q05022
determination method
IBA
small-subunit processome
determination method
IBA
IDA
2 references
retrieved
9 May 2019
stated in
A large nucleolar U3 ribonucleoprotein required for 18S ribosomal RNA biogenesis
GOA
curator
SGD
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:Q05022
determination method
IDA
retrieved
9 May 2019
stated in
Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium
GOA
curator
GO Central
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:Q05022
determination method
IBA
nucleolus
determination method
HDA
IBA
IDA
IEA
4 references
retrieved
9 May 2019
stated in
GOA
curator
UniProt
UniProt protein ID
Q05022
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:Q05022
determination method
IEA
retrieved
9 May 2019
stated in
RRP5 is required for formation of both 18S and 5.8S rRNA in yeast
GOA
curator
SGD
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:Q05022
determination method
IDA
retrieved
9 May 2019
stated in
Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium
GOA
curator
GO Central
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:Q05022
determination method
IBA
retrieved
9 May 2019
stated in
Dissecting DNA damage response pathways by analysing protein localization and abundance changes during DNA replication stress
GOA
curator
SGD
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:Q05022
determination method
HDA
90S preribosome
determination method
HDA
1 reference
retrieved
9 May 2019
stated in
90S pre-ribosomes include the 35S pre-rRNA, the U3 snoRNP, and 40S subunit processing factors but predominantly lack 60S synthesis factors
GOA
curator
SGD
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:Q05022
determination method
HDA
biological process
endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
determination method
IMP
1 reference
retrieved
9 May 2019
stated in
RRP5 is required for formation of both 18S and 5.8S rRNA in yeast
GOA
curator
SGD
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:Q05022
determination method
IMP
ribosome biogenesis
determination method
IEA
1 reference
retrieved
9 May 2019
stated in
GOA
curator
UniProt
UniProt protein ID
Q05022
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:Q05022
determination method
IEA
endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
determination method
IMP
1 reference
retrieved
9 May 2019
stated in
RRP5 is required for formation of both 18S and 5.8S rRNA in yeast
GOA
curator
SGD
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:Q05022
determination method
IMP
RNA processing
determination method
IEA
1 reference
retrieved
9 May 2019
stated in
GOA
curator
InterPro
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:Q05022
determination method
IEA
endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
determination method
IMP
1 reference
retrieved
9 May 2019
stated in
RRP5 is required for formation of both 18S and 5.8S rRNA in yeast
GOA
curator
SGD
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:Q05022
determination method
IMP
endonucleolytic cleavage in ITS1 upstream of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
determination method
IMP
1 reference
retrieved
9 May 2019
stated in
RRP5 is required for formation of both 18S and 5.8S rRNA in yeast
GOA
curator
SGD
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:Q05022
determination method
IMP
maturation of SSU-rRNA
determination method
IDA
1 reference
retrieved
9 May 2019
stated in
Cofactor-dependent specificity of a DEAD-box protein
GOA
curator
SGD
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:Q05022
determination method
IDA
rRNA processing
determination method
IEA
TAS
2 references
retrieved
9 May 2019
stated in
Identification of a novel protein from glial cells based on its ability to interact with NF‐κB subunitsr
GOA
curator
UniProt
UniProt protein ID
Q05022
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:Q05022
determination method
TAS
retrieved
9 May 2019
stated in
GOA
curator
UniProt
UniProt protein ID
Q05022
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:Q05022
determination method
IEA
rRNA methylation
determination method
TAS
1 reference
retrieved
9 May 2019
stated in
GOA
curator
Reactome
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:Q05022
determination method
TAS
90S preribosome assembly
determination method
IMP
1 reference
retrieved
9 May 2019
stated in
Rrp5 binding at multiple sites coordinates pre-rRNA processing and assembly
GOA
curator
SGD
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:Q05022
determination method
IMP
Identifiers
RefSeq protein ID
NP_013956
1 reference
stated in
NCBI Gene
retrieved
20 March 2022
Entrez Gene ID
855269
UniProt protein ID
Q05022
1 reference
stated in
UniProt
retrieved
25 May 2022
UniProt protein ID
Q05022
Ensembl protein ID
YMR229C
1 reference
stated in
ensembl Release 106
Ensembl protein ID
YMR229C
Saccharomyces Genome Database ID
S000004842
1 reference
stated in
NCBI Gene
retrieved
20 March 2022
Entrez Gene ID
855269
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