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Puf4p YGL014W
fungal protein found in Saccharomyces cerevisiae S288c
Puf4p
PUF4
YGL014W
In more languages
edit
Statements
instance of
protein
1 reference
stated in
UniProt
retrieved
25 May 2022
UniProt protein ID
P25339
subclass of
protein
1 reference
stated in
NCBI Gene
retrieved
10 December 2016
Entrez Gene ID
852870
part of
Armadillo-like helical
1 reference
stated in
InterPro Release 71.0
reference URL
http://www.ebi.ac.uk/interpro/protein/P25339
Armadillo-type fold
1 reference
stated in
InterPro Release 71.0
reference URL
http://www.ebi.ac.uk/interpro/protein/P25339
Pumilio homology domain, protein family
1 reference
based on heuristic
inferred from protein domain or family
Pumilio, RNA binding domain, protein family
1 reference
based on heuristic
inferred from protein domain or family
Pumilio RNA-binding repeat, protein family
1 reference
based on heuristic
inferred from protein domain or family
found in taxon
Saccharomyces cerevisiae S288c
1 reference
stated in
UniProt
retrieved
25 May 2022
UniProt protein ID
P25339
encoded by
PUF4
1 reference
stated in
UniProt
retrieved
25 May 2022
UniProt protein ID
P25339
molecular function
RNA binding
determination method
IEA
1 reference
retrieved
9 May 2019
stated in
GOA
curator
InterPro
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P25339
determination method
IEA
mRNA binding
determination method
ISS
IDA
2 references
retrieved
16 July 2018
stated in
The Puf3 protein is a transcript-specific regulator of mRNA degradation in yeast
GOA
curator
SGD
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?protein=P25339&geneProductId=UniProtKB:P25339
determination method
ISS
retrieved
16 July 2018
stated in
Basis of altered RNA-binding specificity by PUF proteins revealed by crystal structures of yeast Puf4p
GOA
curator
SGD
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?protein=P25339&geneProductId=UniProtKB:P25339
determination method
IDA
protein binding
determination method
IPI
1 reference
retrieved
21 June 2018
stated in
Global landscape of protein complexes in the yeast Saccharomyces cerevisiae
GOA
curator
IntAct protein interaction database
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?protein=P25339&geneProductId=UniProtKB:P25339
determination method
IPI
mRNA binding
determination method
HDA
IDA
ISS
4 references
retrieved
14 February 2019
stated in
The Puf3 protein is a transcript-specific regulator of mRNA degradation in yeast
GOA
curator
SGD
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P25339
determination method
ISS
retrieved
14 February 2019
stated in
Basis of altered RNA-binding specificity by PUF proteins revealed by crystal structures of yeast Puf4p
GOA
curator
SGD
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P25339
determination method
IDA
retrieved
14 February 2019
stated in
Extensive association of functionally and cytotopically related mRNAs with Puf family RNA-binding proteins in yeast
GOA
curator
SGD
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P25339
determination method
HDA
retrieved
14 February 2019
stated in
Global analysis of yeast mRNPs
GOA
curator
SGD
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P25339
determination method
HDA
mRNA binding
determination method
HDA
IDA
3 references
retrieved
9 May 2019
stated in
Basis of altered RNA-binding specificity by PUF proteins revealed by crystal structures of yeast Puf4p
GOA
curator
SGD
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P25339
determination method
IDA
retrieved
9 May 2019
stated in
Global analysis of yeast mRNPs
GOA
curator
SGD
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P25339
determination method
HDA
retrieved
9 May 2019
stated in
Extensive association of functionally and cytotopically related mRNAs with Puf family RNA-binding proteins in yeast
GOA
curator
SGD
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P25339
determination method
HDA
cell component
cytoplasm
determination method
IDA
1 reference
stated in
Ensembl genome database project
Ensembl protein ID
YGL014W
retrieved
16 October 2016
cytoplasm
determination method
HDA
1 reference
retrieved
9 May 2019
stated in
Global analysis of protein localization in budding yeast
GOA
curator
SGD
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P25339
determination method
HDA
biological process
transcription, DNA-templated
determination method
IEA
1 reference
retrieved
16 July 2018
stated in
GOA
curator
UniProt
UniProt protein ID
P25339
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?protein=P25339&geneProductId=UniProtKB:P25339
determination method
IEA
nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay
determination method
IGI
1 reference
retrieved
9 May 2019
stated in
The Puf3 protein is a transcript-specific regulator of mRNA degradation in yeast
GOA
curator
SGD
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P25339
determination method
IGI
negative regulation of translation
determination method
IDA
1 reference
retrieved
9 May 2019
stated in
Translational repression by PUF proteins in vitro
GOA
curator
SGD
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P25339
determination method
IDA
protein localization
determination method
IMP
1 reference
retrieved
9 May 2019
stated in
Redistribution of silencing proteins from telomeres to the nucleolus is associated with extension of life span in S. cerevisiae.
GOA
curator
SGD
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P25339
determination method
IMP
regulation of transcription, DNA-templated
determination method
IEA
1 reference
retrieved
16 July 2018
stated in
GOA
curator
UniProt
UniProt protein ID
P25339
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?protein=P25339&geneProductId=UniProtKB:P25339
determination method
IEA
has part(s)
Pumilio RNA-binding repeat
1 reference
stated in
InterPro Release 71.0
reference URL
http://www.ebi.ac.uk/interpro/protein/P25339
Pumilio, RNA binding domain
1 reference
stated in
InterPro Release 71.0
reference URL
http://www.ebi.ac.uk/interpro/protein/P25339
Pumilio homology domain
1 reference
stated in
InterPro Release 71.0
reference URL
http://www.ebi.ac.uk/interpro/protein/P25339
Identifiers
RefSeq protein ID
NP_011501
1 reference
stated in
NCBI Gene
retrieved
20 March 2022
Entrez Gene ID
852870
UniProt protein ID
P25339
1 reference
stated in
UniProt
retrieved
25 May 2022
UniProt protein ID
P25339
Ensembl protein ID
YGL014W
1 reference
stated in
ensembl Release 106
Ensembl protein ID
YGL014W
Saccharomyces Genome Database ID
S000002982
1 reference
stated in
NCBI Gene
retrieved
20 March 2022
Entrez Gene ID
852870
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