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CCR4-NOT core subunit CAF40 YNL288W
fungal protein found in Saccharomyces cerevisiae S288c
CCR4-NOT core subunit CAF40
CAF40
YNL288W
In more languages
edit
Statements
instance of
protein
1 reference
stated in
UniProt
retrieved
25 May 2022
UniProt protein ID
P53829
subclass of
protein
1 reference
stated in
NCBI Gene
retrieved
10 December 2016
Entrez Gene ID
855428
part of
Armadillo-like helical
1 reference
stated in
InterPro Release 71.0
reference URL
http://www.ebi.ac.uk/interpro/protein/P53829
Armadillo-type fold
1 reference
stated in
InterPro Release 71.0
reference URL
http://www.ebi.ac.uk/interpro/protein/P53829
found in taxon
Saccharomyces cerevisiae S288c
1 reference
stated in
UniProt
retrieved
25 May 2022
UniProt protein ID
P53829
encoded by
CAF40
1 reference
stated in
UniProt
retrieved
25 May 2022
UniProt protein ID
P53829
molecular function
protein binding
determination method
IPI
7 references
retrieved
9 May 2019
stated in
High-quality binary protein interaction map of the yeast interactome network
GOA
curator
IntAct protein interaction database
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P53829
determination method
IPI
retrieved
9 May 2019
stated in
An in vivo map of the yeast protein interactome
GOA
curator
IntAct protein interaction database
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P53829
determination method
IPI
retrieved
9 May 2019
stated in
Functional organization of the yeast proteome by systematic analysis of protein complexes
GOA
curator
IntAct protein interaction database
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P53829
determination method
IPI
retrieved
9 May 2019
stated in
The yeast Ccr4-Not complex controls ubiquitination of the nascent-associated polypeptide (NAC-EGD) complex
GOA
curator
IntAct protein interaction database
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P53829
determination method
IPI
retrieved
9 May 2019
stated in
Purification and characterization of the 1.0 MDa CCR4-NOT complex identifies two novel components of the complex
GOA
curator
IntAct protein interaction database
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P53829
determination method
IPI
retrieved
9 May 2019
stated in
Proteome survey reveals modularity of the yeast cell machinery
GOA
curator
IntAct protein interaction database
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P53829
determination method
IPI
retrieved
9 May 2019
stated in
A comprehensive analysis of protein-protein interactions in Saccharomyces cerevisiae
GOA
curator
IntAct protein interaction database
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P53829
determination method
IPI
molecular function
determination method
ND
1 reference
retrieved
9 May 2019
stated in
GOA
curator
SGD
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P53829
determination method
ND
cell component
P-body
determination method
IBA
1 reference
retrieved
9 May 2019
stated in
Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium
GOA
curator
GO Central
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P53829
determination method
IBA
cytoplasm
determination method
IEA
1 reference
retrieved
9 May 2019
stated in
GOA
curator
UniProt
UniProt protein ID
P53829
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P53829
determination method
IEA
nucleus
determination method
IEA
1 reference
retrieved
9 May 2019
stated in
GOA
curator
UniProt
UniProt protein ID
P53829
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P53829
determination method
IEA
CCR4-NOT core complex
determination method
IPI
1 reference
retrieved
5 June 2018
stated in
Purification and characterization of the 1.0 MDa CCR4-NOT complex identifies two novel components of the complex
GOA
curator
SGD
Saccharomyces Genome Database ID
S000005232
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?protein=P53829&geneProductId=UniProtKB:P53829
determination method
IPI
CCR4-NOT core complex
determination method
IBA
IPI
2 references
retrieved
9 May 2019
stated in
Purification and characterization of the 1.0 MDa CCR4-NOT complex identifies two novel components of the complex
GOA
curator
SGD
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P53829
determination method
IPI
retrieved
9 May 2019
stated in
Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium
GOA
curator
GO Central
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P53829
determination method
IBA
CCR4-NOT complex
determination method
IEA
1 reference
retrieved
9 May 2019
stated in
GOA
curator
InterPro
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P53829
determination method
IEA
biological process
regulation of transcription by RNA polymerase II
determination method
IPI
1 reference
retrieved
9 May 2019
stated in
Purification and characterization of the 1.0 MDa CCR4-NOT complex identifies two novel components of the complex
GOA
curator
SGD
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P53829
determination method
IPI
positive regulation of transcription elongation from RNA polymerase II promoter
determination method
IDA
1 reference
retrieved
9 May 2019
stated in
The multifunctional Ccr4-Not complex directly promotes transcription elongation
GOA
curator
SGD
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P53829
determination method
IDA
transcription, DNA-templated
determination method
IEA
1 reference
retrieved
5 June 2018
stated in
GOA
curator
UniProt
UniProt protein ID
P53829
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?protein=P53829&geneProductId=UniProtKB:P53829
determination method
IEA
negative regulation of translation
determination method
IBA
1 reference
retrieved
9 May 2019
stated in
Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium
GOA
curator
GO Central
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P53829
determination method
IBA
regulation of transcription, DNA-templated
determination method
IEA
1 reference
retrieved
5 June 2018
stated in
GOA
curator
UniProt
UniProt protein ID
P53829
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?protein=P53829&geneProductId=UniProtKB:P53829
determination method
IEA
nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay
determination method
IBA
1 reference
retrieved
5 June 2018
stated in
GOA
curator
GO Central
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?protein=P53829&geneProductId=UniProtKB:P53829
determination method
IBA
mRNA catabolic process
determination method
IEA
1 reference
retrieved
9 May 2019
stated in
GOA
curator
InterPro
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P53829
determination method
IEA
Identifiers
RefSeq protein ID
NP_014111
1 reference
stated in
NCBI Gene
retrieved
20 March 2022
Entrez Gene ID
855428
UniProt protein ID
P53829
1 reference
stated in
UniProt
retrieved
25 May 2022
UniProt protein ID
P53829
Ensembl protein ID
YNL288W
1 reference
stated in
ensembl Release 106
Ensembl protein ID
YNL288W
Saccharomyces Genome Database ID
S000005232
1 reference
stated in
NCBI Gene
retrieved
20 March 2022
Entrez Gene ID
855428
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