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Nmd2p YHR077C
fungal protein found in Saccharomyces cerevisiae S288c
NMD2
Nmd2p
YHR077C
In more languages
edit
Statements
instance of
protein
1 reference
stated in
UniProt
retrieved
25 May 2022
UniProt protein ID
P38798
subclass of
protein
1 reference
stated in
NCBI Gene
retrieved
10 December 2016
Entrez Gene ID
856476
found in taxon
Saccharomyces cerevisiae S288c
1 reference
stated in
UniProt
retrieved
25 May 2022
UniProt protein ID
P38798
encoded by
NMD2
1 reference
stated in
UniProt
retrieved
25 May 2022
UniProt protein ID
P38798
molecular function
RNA binding
determination method
IEA
1 reference
retrieved
9 May 2019
stated in
GOA
curator
InterPro
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P38798
determination method
IEA
molecular function
determination method
ND
1 reference
retrieved
9 May 2019
stated in
GOA
curator
SGD
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P38798
determination method
ND
protein binding
determination method
IPI
2 references
retrieved
9 May 2019
stated in
A comprehensive analysis of protein-protein interactions in Saccharomyces cerevisiae
GOA
curator
IntAct protein interaction database
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P38798
determination method
IPI
retrieved
9 May 2019
stated in
Upf1p, Nmd2p, and Upf3p are interacting components of the yeast nonsense-mediated mRNA decay pathway
GOA
curator
IntAct protein interaction database
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P38798
determination method
IPI
cell component
polysome
determination method
IDA
1 reference
retrieved
27 March 2018
stated in
Relationship between yeast polyribosomes and Upf proteins required for nonsense mRNA decay
GOA
curator
SGD
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?protein=P38798&geneProductId=UniProtKB:P38798
determination method
IDA
cytoplasm
determination method
IEA
IDA
2 references
retrieved
27 March 2018
stated in
GOA
curator
UniProt
UniProt protein ID
P38798
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?protein=P38798&geneProductId=UniProtKB:P38798
determination method
IEA
retrieved
27 March 2018
stated in
Transcript selection and the recruitment of mRNA decay factors for NMD in Saccharomyces cerevisiae
GOA
curator
SGD
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?protein=P38798&geneProductId=UniProtKB:P38798
determination method
IDA
exon-exon junction complex
determination method
IBA
1 reference
retrieved
9 May 2019
stated in
Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium
GOA
curator
GO Central
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P38798
determination method
IBA
cytoplasm
determination method
IBA
IDA
IEA
3 references
retrieved
9 May 2019
stated in
GOA
curator
UniProt
UniProt protein ID
P38798
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P38798
determination method
IEA
retrieved
9 May 2019
stated in
Transcript selection and the recruitment of mRNA decay factors for NMD in Saccharomyces cerevisiae
GOA
curator
SGD
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P38798
determination method
IDA
retrieved
9 May 2019
stated in
Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium
GOA
curator
GO Central
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P38798
determination method
IBA
polysome
determination method
IBA
IDA
2 references
retrieved
9 May 2019
stated in
Relationship between yeast polyribosomes and Upf proteins required for nonsense mRNA decay
GOA
curator
SGD
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P38798
determination method
IDA
retrieved
9 May 2019
stated in
Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium
GOA
curator
GO Central
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P38798
determination method
IBA
biological process
nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
determination method
IMP
1 reference
retrieved
27 March 2018
stated in
Role for Upf2p phosphorylation in Saccharomyces cerevisiae nonsense-mediated mRNA decay
GOA
curator
SGD
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?protein=P38798&geneProductId=UniProtKB:P38798
determination method
IMP
translational frameshifting
determination method
IMP
1 reference
retrieved
14 February 2019
stated in
Evidence against a direct role for the Upf proteins in frameshifting or nonsense codon readthrough.
GOA
curator
SGD
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P38798
determination method
IMP
DNA recombination
determination method
IMP
1 reference
retrieved
9 May 2019
stated in
Telomerase-null survivor screening identifies novel telomere recombination regulators.
GOA
curator
SGD
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P38798
determination method
IMP
nuclear-transcribed mRNA catabolic process, 3'-5' exonucleolytic nonsense-mediated decay
determination method
IGI
1 reference
retrieved
9 May 2019
stated in
Interaction between Ski7p and Upf1p is required for nonsense-mediated 3'-to-5' mRNA decay in yeast
GOA
curator
SGD
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P38798
determination method
IGI
nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
determination method
IBA
IEA
IMP
3 references
retrieved
9 May 2019
stated in
Role for Upf2p phosphorylation in Saccharomyces cerevisiae nonsense-mediated mRNA decay
GOA
curator
SGD
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P38798
determination method
IMP
retrieved
9 May 2019
stated in
GOA
curator
InterPro
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P38798
determination method
IEA
retrieved
9 May 2019
stated in
Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium
GOA
curator
GO Central
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P38798
determination method
IBA
Identifiers
RefSeq protein ID
NP_011944
1 reference
stated in
NCBI Gene
retrieved
20 March 2022
Entrez Gene ID
856476
UniProt protein ID
P38798
1 reference
stated in
UniProt
retrieved
25 May 2022
UniProt protein ID
P38798
Ensembl protein ID
YHR077C
1 reference
stated in
ensembl Release 106
Ensembl protein ID
YHR077C
Saccharomyces Genome Database ID
S000001119
1 reference
stated in
NCBI Gene
retrieved
20 March 2022
Entrez Gene ID
856476
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