(Q27636997)

20 October 2023

V N Malashkevich

series ordinal

2

author given names

V N

author last names

Malashkevich

1 reference

20 October 2023

B Tidor

series ordinal

3

author given names

B

author last names

Tidor

1 reference

20 October 2023

P S Kim

series ordinal

4

author given names

P S

author last names

Kim

1 reference

Proceedings of the National Academy of Sciences of the United States of America

20 October 2023

language of work or name

English

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publication date

18 December 2001

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published in

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volume

98

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issue

26

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page(s)

14825-30

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cites work

Buried polar residues in coiled-coil interfaces

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=64943

Interhelical ion pairing in coiled coils: solution structure of a heterodimeric leucine zipper and determination of pKa values of Glu side chains

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=64943

High-resolution protein design with backbone freedom

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=64943

A switch between two-, three-, and four-stranded coiled coils in GCN4 leucine zipper mutants

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=64943

Atomic solvation parameters applied to molecular dynamics of proteins in solution

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=64943

The CCP4 suite: programs for protein crystallography

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=64943

Crystallography & NMR System: A New Software Suite for Macromolecular Structure Determination

20 March 2017

2 references

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=64943

20 March 2017

https://api.crossref.org/works/10.1073/PNAS.261563398

The interpretation of protein structures: Estimation of static accessibility

22 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=64943

Improved methods for building protein models in electron density maps and the location of errors in these models

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=64943

A computationally directed screen identifying interacting coiled coils from Saccharomyces cerevisiae

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=64943

Backbone-dependent rotamer library for proteins. Application to side-chain prediction

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=64943

Spectroscopic Determination of Tryptophan and Tyrosine in Proteins*

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=64943

Mechanisms of viral membrane fusion and its inhibition

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=64943

Coiled coils: a highly versatile protein folding motif

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=64943

MultiCoil: a program for predicting two- and three-stranded coiled coils

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=64943

Predicting coiled coils by use of pairwise residue correlations

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=64943

The dead-end elimination theorem and its use in protein side-chain positioning

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=64943

Attractive interhelical electrostatic interactions in the proline- and acidic-rich region (PAR) leucine zipper subfamily preclude heterodimerization with other basic leucine zipper subfamilies

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=64943

Exploring the conformational space of protein side chains using dead-end elimination and the A* algorithm

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=64943

Protein design automation

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=64943

Disulfide bond contribution to protein stability: positional effects of substitution in the hydrophobic core of the two-stranded alpha-helical coiled-coil

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=64943

Efficient rotamer elimination applied to protein side-chains and related spin glasses

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=64943

Transcription factors 1: bZIP proteins.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=64943

Repacking protein cores with backbone freedom: structure prediction for coiled coils

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=64943

Peptide 'Velcro': design of a heterodimeric coiled coil.

29 September 2017

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.261563398

CHARMM: A program for macromolecular energy, minimization, and dynamics calculations

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.261563398

A thermodynamic scale for the helix-forming tendencies of the commonly occurring amino acids

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.261563398

Ionic interactions in the coiled-coil domain of laminin determine the specificity of chain assembly

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.261563398

Dimerization specificity of the leucine zipper-containing bZIP motif on DNA binding: prediction and rational design

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.261563398

The Fourier transform of a coiled-coil

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.261563398

Leucine is the most stabilizing aliphatic amino acid in the d position of a dimeric leucine zipper coiled coil

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.261563398

Improved modeling of side-chains in proteins with rotamer-based methods: A flexible rotamer model

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.261563398

A buried polar interaction imparts structural uniqueness in a designed heterodimeric coiled coil

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.261563398

21 January 2018

Identifiers

DOI

10.1073/PNAS.261563398

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