(Q27643708)

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Common mode of DNA binding to cold shock domains. Crystal structure of hexathymidine bound to the domain-swapped form of a major cold shock protein from Bacillus caldolyticus

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Common mode of DNA binding to cold shock domains. Crystal structure of hexathymidine bound to the domain-swapped form of a major cold shock protein from Bacillus caldolyticus (English)

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crystal structure

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protein structure

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5

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4

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author name string

Klaas E A Max

1

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Markus Zeeb

2

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Ralf Bienert

3

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language of work or name

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publication date

March 2007

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274

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5

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1265-79

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Induction of proteins in response to low temperature in Escherichia coli

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https://api.crossref.org/works/10.1111%2FJ.1742-4658.2007.05672.X

21 January 2018

Cold shock stress-induced proteins in Bacillus subtilis

1 reference

https://api.crossref.org/works/10.1111%2FJ.1742-4658.2007.05672.X

21 January 2018

A family of cold shock proteins in Bacillus subtilis is essential for cellular growth and for efficient protein synthesis at optimal and low temperatures.

1 reference

https://api.crossref.org/works/10.1111%2FJ.1742-4658.2007.05672.X

21 January 2018

CspA, the major cold-shock protein of Escherichia coli, is an RNA chaperone.

1 reference

https://api.crossref.org/works/10.1111%2FJ.1742-4658.2007.05672.X

21 January 2018

Escherichia coli CspA-family RNA chaperones are transcription antiterminators

1 reference

https://api.crossref.org/works/10.1111%2FJ.1742-4658.2007.05672.X

21 January 2018

A superfamily of proteins that contain the cold-shock domain

1 reference

https://api.crossref.org/works/10.1111%2FJ.1742-4658.2007.05672.X

21 January 2018

Localization of cold shock proteins to cytosolic spaces surrounding nucleoids in Bacillus subtilis depends on active transcription

1 reference

https://api.crossref.org/works/10.1111%2FJ.1742-4658.2007.05672.X

21 January 2018

Specific polar localization of ribosomes in Bacillus subtilis depends on active transcription

1 reference

https://api.crossref.org/works/10.1111%2FJ.1742-4658.2007.05672.X

21 January 2018

The major cold shock protein of Bacillus subtilis CspB binds with high affinity to the ATTGG- and CCAAT sequences in single stranded oligonucleotides

1 reference

https://api.crossref.org/works/10.1111%2FJ.1742-4658.2007.05672.X

21 January 2018

Major cold shock proteins, CspA from Escherichia coli and CspB from Bacillus subtilis, interact differently with single-stranded DNA templates

1 reference

https://api.crossref.org/works/10.1111%2FJ.1742-4658.2007.05672.X

21 January 2018

Interactions of the major cold shock protein of Bacillus subtilis CspB with single-stranded DNA templates of different base composition

1 reference

https://api.crossref.org/works/10.1111%2FJ.1742-4658.2007.05672.X

21 January 2018

Interactions of the cold shock protein CspB from Bacillus subtilis with single-stranded DNA. Importance of the T base content and position within the template

1 reference

https://api.crossref.org/works/10.1111%2FJ.1742-4658.2007.05672.X

21 January 2018

Single-stranded DNA binding of the cold-shock protein CspB from Bacillus subtilis: NMR mapping and mutational characterization

1 reference

https://api.crossref.org/works/10.1111%2FJ.1742-4658.2007.05672.X

21 January 2018

Universal nucleic acid-binding domain revealed by crystal structure of the B. subtilis major cold-shock protein

1 reference

https://api.crossref.org/works/10.1111%2FJ.1742-4658.2007.05672.X

21 January 2018

Crystal structure of CspA, the major cold shock protein of Escherichia coli

1 reference

https://api.crossref.org/works/10.1111%2FJ.1742-4658.2007.05672.X

21 January 2018

Thermal stability and atomic-resolution crystal structure of the Bacillus caldolyticus cold shock protein

1 reference

https://api.crossref.org/works/10.1111%2FJ.1742-4658.2007.05672.X

21 January 2018

Crystal structures of mutant forms of the Bacillus caldolyticus cold shock protein differing in thermal stability

1 reference

https://api.crossref.org/works/10.1111%2FJ.1742-4658.2007.05672.X

21 January 2018

Structure in solution of the major cold-shock protein from Bacillus subtilis

1 reference

https://api.crossref.org/works/10.1111%2FJ.1742-4658.2007.05672.X

21 January 2018

Solution NMR structure of the cold-shock protein from the hyperthermophilic bacterium Thermotoga maritima

1 reference

https://api.crossref.org/works/10.1111%2FJ.1742-4658.2007.05672.X

21 January 2018

OB-fold: growing bigger with functional consistency

1 reference

https://api.crossref.org/works/10.1111%2FJ.1742-4658.2007.05672.X

21 January 2018

T-rich DNA single strands bind to a preformed site on the bacterial cold shock protein Bs-CspB.

1 reference

https://api.crossref.org/works/10.1111%2FJ.1742-4658.2007.05672.X

21 January 2018

Recognition of T-rich single-stranded DNA by the cold shock protein Bs-CspB in solution

1 reference

https://api.crossref.org/works/10.1111%2FJ.1742-4658.2007.05672.X

21 January 2018

Structural basis of single-stranded RNA recognition

1 reference

https://api.crossref.org/works/10.1111%2FJ.1742-4658.2007.05672.X

21 January 2018

Mutational analysis of the putative nucleic acid-binding surface of the cold-shock domain, CspB, revealed an essential role of aromatic and basic residues in binding of single-stranded DNA containing the Y-box motif

1 reference

https://api.crossref.org/works/10.1111%2FJ.1742-4658.2007.05672.X

21 January 2018

Amyloid-like fibrils of ribonuclease A with three-dimensional domain-swapped and native-like structure.

1 reference

https://api.crossref.org/works/10.1111%2FJ.1742-4658.2007.05672.X

21 January 2018

Structural versatility of bovine ribonuclease A. Distinct conformers of trimeric and tetrameric aggregates of the enzyme.

1 reference

https://api.crossref.org/works/10.1111%2FJ.1742-4658.2007.05672.X

21 January 2018

DNA gyrase, CS7.4, and the cold shock response in Escherichia coli

1 reference

https://api.crossref.org/works/10.1111%2FJ.1742-4658.2007.05672.X

21 January 2018

Genome-wide transcriptional analysis of the cold shock response in wild-type and cold-sensitive, quadruple-csp-deletion strains of Escherichia coli

1 reference

https://api.crossref.org/works/10.1111%2FJ.1742-4658.2007.05672.X

21 January 2018

The cold-shock response--a hot topic

1 reference

https://api.crossref.org/works/10.1111%2FJ.1742-4658.2007.05672.X

21 January 2018

The existence of two genes between infB and rpsO in the Escherichia coli genome: DNA sequencing and S1 nuclease mapping

1 reference

https://api.crossref.org/works/10.1111%2FJ.1742-4658.2007.05672.X

21 January 2018

Acquirement of cold sensitivity by quadruple deletion of the cspA family and its suppression by PNPase S1 domain in Escherichia coli

1 reference

https://api.crossref.org/works/10.1111%2FJ.1742-4658.2007.05672.X

21 January 2018

An acidic protein, YBAP1, mediates the release of YB-1 from mRNA and relieves the translational repression activity of YB-1.

1 reference

https://api.crossref.org/works/10.1111%2FJ.1742-4658.2007.05672.X

21 January 2018

Single-stranded DNA bound to bacterial cold-shock proteins: preliminary crystallographic and Raman analysis

1 reference

https://api.crossref.org/works/10.1111%2FJ.1742-4658.2007.05672.X

21 January 2018

Facilities and methods for the high-throughput crystal structural analysis of human proteins.

1 reference

https://api.crossref.org/works/10.1111%2FJ.1742-4658.2007.05672.X

21 January 2018

Automatic processing of rotation diffraction data from crystals of initially unknown symmetry and cell constants

1 reference

https://api.crossref.org/works/10.1111%2FJ.1742-4658.2007.05672.X

21 January 2018

Refinement of macromolecular structures by the maximum-likelihood method

1 reference

https://api.crossref.org/works/10.1111%2FJ.1742-4658.2007.05672.X

21 January 2018

15 Thermodynamic methods for model-independent determination of equilibrium binding isotherms for protein-DNA interactions: Spectroscopic approaches to monitor binding

1 reference

https://api.crossref.org/works/10.1111%2FJ.1742-4658.2007.05672.X

21 January 2018

Fluorescence methods for studying equilibrium macromolecule-ligand interactions

1 reference

https://api.crossref.org/works/10.1111%2FJ.1742-4658.2007.05672.X

21 January 2018

Improved R-factors for diffraction data analysis in macromolecular crystallography

1 reference

https://api.crossref.org/works/10.1111%2FJ.1742-4658.2007.05672.X

21 January 2018

Electrostatics of nanosystems: application to microtubules and the ribosome

1 reference

https://api.crossref.org/works/10.1111%2FJ.1742-4658.2007.05672.X

21 January 2018

An NMR investigation of solution aggregation reactions preceding the misassembly of acid-denatured cold shock protein A into fibrils

1 reference

https://api.crossref.org/works/10.1111%2FJ.1742-4658.2007.05672.X

21 January 2018

Identifiers

10.1111/J.1742-4658.2007.05672.X

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