(Q27646549)

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Embryonic Neural Inducing Factor Churchill Is not a DNA-binding Zinc Finger Protein: Solution Structure Reveals a Solvent-exposed β-Sheet and Zinc Binuclear Cluster

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Europe PubMed Central

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17610897%20AND%20SRC:MED&resulttype=core&format=json

1 January 2020

Embryonic neural inducing factor churchill is not a DNA-binding zinc finger protein: solution structure reveals a solvent-exposed beta-sheet and zinc binuclear cluster (English)

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17610897%20AND%20SRC:MED&resulttype=core&format=json

1 January 2020

protein structure

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solution structure

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based on heuristic

inferred from title

4

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1 January 2020

5

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17610897%20AND%20SRC:MED&resulttype=core&format=json

1 January 2020

author name string

Brian M Lee

1

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1 January 2020

Bethany A Buck-Koehntop

2

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1 January 2020

Maria A Martinez-Yamout

3

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1 January 2020

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15 June 2007

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1 January 2020

number of pages

16

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Journal of Molecular Biology

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1 January 2020

371

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1 January 2020

5

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Europe PubMed Central

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1 January 2020

1274-1289

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17610897%20AND%20SRC:MED&resulttype=core&format=json

1 January 2020

Hydrophobic Surface Burial Is the Major Stability Determinant of a Flat, Single-layer β-Sheet

1 reference

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20 March 2017

Solution structure of an Arabidopsis WRKY DNA binding domain

1 reference

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20 March 2017

Crystal structure of the RAG1 dimerization domain reveals multiple zinc-binding motifs including a novel zinc binuclear cluster

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1994575

20 March 2017

High affinity binding sites for the Wilms' tumour suppressor protein WT1

1 reference

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High-resolution structure of an HIV zinc fingerlike domain via a new NMR-based distance geometry approach

1 reference

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20 March 2017

NMR View: A computer program for the visualization and analysis of NMR data

1 reference

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20 March 2017

The Amber biomolecular simulation programs

1 reference

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20 March 2017

Automated NMR structure calculation with CYANA

1 reference

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20 March 2017

Protein backbone angle restraints from searching a database for chemical shift and sequence homology

1 reference

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20 March 2017

MOLMOL: a program for display and analysis of macromolecular structures

1 reference

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20 March 2017

Dali: a network tool for protein structure comparison

1 reference

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20 March 2017

NMRPipe: a multidimensional spectral processing system based on UNIX pipes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1994575

20 March 2017

Backbone dynamics of a free and phosphopeptide-complexed Src homology 2 domain studied by 15N NMR relaxation

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1994575

20 March 2017

Zinc finger proteins: new insights into structural and functional diversity

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1994575

20 March 2017

Conserved patterns of cell movements during vertebrate gastrulation

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1994575

20 March 2017

Chordin regulates primitive streak development and the stability of induced neural cells, but is not sufficient for neural induction in the chick embryo

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1994575

20 March 2017

Churchill, a zinc finger transcriptional activator, regulates the transition between gastrulation and neurulation

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1994575

20 March 2017

Iterated profile searches with PSI-BLAST--a tool for discovery in protein databases

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1994575

7 April 2017

Primary structure effects on peptide group hydrogen exchange

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1994575

7 April 2017

Backbone dynamics of Escherichia coli ribonuclease HI: correlations with structure and function in an active enzyme

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1994575

7 April 2017

Induced fit and "lock and key" recognition of 5S RNA by zinc fingers of transcription factor IIIA.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1994575

29 September 2017

Neural induction: old problem, new findings, yet more questions

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1994575

29 September 2017

Gastrulation movements: the logic and the nuts and bolts

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1994575

29 September 2017

A rapid method to attain isotope labeled small soluble peptides for NMR studies

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29 September 2017

NMR methods for characterizing microsecond to millisecond dynamics in recognition and catalysis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1994575

29 September 2017

Slow dynamics in folded and unfolded states of an SH3 domain

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1994575

29 September 2017

H(C)CH-COSY and (H)CCH-COSY experiments for 13C-labeled proteins in H2O solution

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1994575

29 September 2017

Identification of preferred hTBP DNA binding sites by the combinatorial method REPSA.

1 reference

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29 September 2017

Preventing the loss of competence for neural induction: HGF/SF, L5 and Sox-2.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1994575

29 September 2017

Vertebrate embryonic cells will become nerve cells unless told otherwise

1 reference

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29 September 2017

Sequence specificity of triplex DNA formation: Analysis by a combinatorial approach, restriction endonuclease protection selection and amplification

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1994575

29 September 2017

Tautomeric states of the active-site histidines of phosphorylated and unphosphorylated IIIGlc, a signal-transducing protein from Escherichia coli, using two-dimensional heteronuclear NMR techniques

1 reference

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29 September 2017

Amino acid type determination in the sequential assignment procedure of uniformly 13C/15N-enriched proteins.

1 reference

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29 September 2017

Sequence and structural requirements for high-affinity DNA binding by the WT1 gene product

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1994575

29 September 2017

Improved efficiency of protein structure calculations from NMR data using the program DIANA with redundant dihedral angle constraints.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1994575

29 September 2017

DNA recognition by GAL4: structure of a protein-DNA complex.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1994575

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1994575

29 September 2017

Xenopus laevis POU91 protein, an Oct3/4 homologue, regulates competence transitions from mesoderm to neural cell fates

1 reference

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2 June 2018

Direct measurements of the dissociation-rate constant for inhibitor-enzyme complexes via the T1 rho and T2 (CPMG) methods.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1994575

2 June 2018

Measurement of two-bond JCOH alpha coupling constants in proteins uniformly enriched with 13C

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1994575

2 June 2018

Overcoming the overlap problem in the assignment of 1H NMR spectra of larger proteins by use of three-dimensional heteronuclear 1H-15N Hartmann-Hahn-multiple quantum coherence and nuclear Overhauser-multiple quantum coherence spectroscopy: applicati

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1994575

19 June 2018

An (H)C(CO)NH-TOCSY pulse scheme for sequential assignment of protonated methyl groups in otherwise deuterated (15)N, (13)C-labeled proteins

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1994575

27 November 2018

Neural induction requires BMP inhibition only as a late step, and involves signals other than FGF and Wnt antagonists.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1994575

27 November 2018

XSIP1 is essential for early neural gene expression and neural differentiation by suppression of BMP signaling.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1994575

27 November 2018

Backbone dynamics and thermodynamics of Borrelia outer surface protein A.

1 reference

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27 November 2018

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1 reference

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27 November 2018

The status of Wnt signalling regulates neural and epidermal fates in the chick embryo

1 reference

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27 November 2018

Induction of embryonic primordia by implantation of organizers from a different species. 1923.

1 reference

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27 November 2018

Initiation of neural induction by FGF signalling before gastrulation.

1 reference

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27 November 2018

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1 reference

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27 November 2018

Side-chain interactions between sulfur-containing amino acids and phenylalanine in alpha-helices.

1 reference

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27 November 2018

A stable single-layer beta-sheet without a hydrophobic core

1 reference

https://pubmed.ncbi.nlm.nih.gov/17610897

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Study of cysteine residues in the alpha subunit of Escherichia coli tryptophan synthase. 1. Role in conformational stability

1 reference

https://pubmed.ncbi.nlm.nih.gov/17610897

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

An early requirement for FGF signalling in the acquisition of neural cell fate in the chick embryo

1 reference

https://pubmed.ncbi.nlm.nih.gov/17610897

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Neural induction in Xenopus requires early FGF signalling in addition to BMP inhibition

1 reference

https://pubmed.ncbi.nlm.nih.gov/17610897

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Thermodynamic parameters from hydrogen exchange measurements

1 reference

https://pubmed.ncbi.nlm.nih.gov/17610897

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

NMR characterization of the dynamics of biomacromolecules

1 reference

https://pubmed.ncbi.nlm.nih.gov/17610897

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Neural tissue in ascidian embryos is induced by FGF9/16/20, acting via a combination of maternal GATA and Ets transcription factors

1 reference

https://pubmed.ncbi.nlm.nih.gov/17610897

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Comparison of the DNA binding characteristics of the related zinc finger proteins WT1 and EGR1

1 reference

https://pubmed.ncbi.nlm.nih.gov/17610897

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Microsecond time scale dynamics in the RXR DNA-binding domain from a combination of spin-echo and off-resonance rotating frame relaxation measurements

1 reference

https://pubmed.ncbi.nlm.nih.gov/17610897

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1016/J.JMB.2007.06.021

1 reference

Europe PubMed Central

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1 January 2020

PMC publication ID

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Europe PubMed Central

PMC publication ID

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1 January 2020

PubMed publication ID

1 reference

Europe PubMed Central

PMC publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17610897%20AND%20SRC:MED&resulttype=core&format=json

1 January 2020

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