(Q27650273)

English

The catalytic scaffold of the haloalkanoic acid dehalogenase enzyme superfamily acts as a mold for the trigonal bipyramidal transition state

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scholarly article

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The catalytic scaffold of the haloalkanoic acid dehalogenase enzyme superfamily acts as a mold for the trigonal bipyramidal transition state (English)

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Debra Dunaway-Mariano

2

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author name string

Zhibing Lu

1

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Karen N Allen

3

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language of work or name

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publication date

15 April 2008

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Proceedings of the National Academy of Sciences of the United States of America

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105

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5687-92

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15

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Structure and mutational analysis of the PhoN protein of Salmonella typhimurium provide insight into mechanistic details

1 reference

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20 March 2017

Inhibition of Fructose-1,6-bisphosphatase by a New Class of Allosteric Effectors

1 reference

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20 March 2017

The pentacovalent phosphorus intermediate of a phosphoryl transfer reaction

1 reference

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20 March 2017

Insights into substrate binding and catalytic mechanism of human tyrosyl-DNA phosphodiesterase (Tdp1) from vanadate and tungstate-inhibited structures

1 reference

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Caught in the act: the structure of phosphorylated beta-phosphoglucomutase from Lactococcus lactis

1 reference

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1 reference

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20 March 2017

Histidine 90 function in 4-chlorobenzoyl-coenzyme a dehalogenase catalysis

1 reference

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20 March 2017

Structure of the molybdate/tungstate binding protein mop from Sporomusa ovata

1 reference

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20 March 2017

The crystal structure of bacillus cereus phosphonoacetaldehyde hydrolase: insight into catalysis of phosphorus bond cleavage and catalytic diversification within the HAD enzyme superfamily

1 reference

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20 March 2017

Structure-based analysis of catalysis and substrate definition in the HIT protein family

1 reference

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20 March 2017

SHELXL: high-resolution refinement

1 reference

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20 March 2017

Coot: model-building tools for molecular graphics

1 reference

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20 March 2017

Crystallography & NMR System: A New Software Suite for Macromolecular Structure Determination

2 references

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2311376

20 March 2017

https://api.crossref.org/works/10.1073/PNAS.0710800105

22 April 2017

Seeing the process of histidine phosphorylation in human bisphosphoglycerate mutase

1 reference

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20 March 2017

Analysis of the substrate specificity loop of the HAD superfamily cap domain

1 reference

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20 March 2017

A Trojan horse transition state analogue generated by MgF3- formation in an enzyme active site.

1 reference

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29 September 2017

Evolutionary genomics of the HAD superfamily: understanding the structural adaptations and catalytic diversity in a superfamily of phosphoesterases and allied enzymes

1 reference

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29 September 2017

HAD superfamily phosphotransferase substrate diversification: structure and function analysis of HAD subclass IIB sugar phosphatase BT4131.

1 reference

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29 September 2017

The power of vanadate in crystallographic investigations of phosphoryl transfer enzymes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2311376

29 September 2017

Phosphoryl group transfer: evolution of a catalytic scaffold

1 reference

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29 September 2017

Phosphoryl transfer and calcium ion occlusion in the calcium pump

1 reference

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29 September 2017

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1 reference

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29 September 2017

Computer simulations of enzyme catalysis: finding out what has been optimized by evolution.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2311376

29 September 2017

Diversification of function in the haloacid dehalogenase enzyme superfamily: The role of the cap domain in hydrolytic phosphoruscarbon bond cleavage

1 reference

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2 June 2018

Investigation of metal ion binding in phosphonoacetaldehyde hydrolase identifies sequence markers for metal-activated enzymes of the HAD enzyme superfamily

1 reference

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2 June 2018

Possible transition-state analogs for ribonuclease. Complexes of uridine with oxovanadium(IV) ion and vanadium(V) ion

1 reference

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2 June 2018

Chemical confirmation of a pentavalent phosphorane in complex with beta-phosphoglucomutase

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0710800105

21 January 2018

Catalytic cycling in beta-phosphoglucomutase: a kinetic and structural analysis

1 reference

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21 January 2018

The Effect of Structure upon the Reactions of Organic Compounds. Benzene Derivatives

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21 January 2018

The reaction mechanism of phospholipase D from Streptomyces sp. strain PMF. Snapshots along the reaction pathway reveal a pentacoordinate reaction intermediate and an unexpected final product.

1 reference

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21 January 2018

Crystal structure of the protein histidine phosphatase SixA in the multistep His-Asp phosphorelay

1 reference

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21 January 2018

Structure and activity analyses of Escherichia coli K-12 NagD provide insight into the evolution of biochemical function in the haloalkanoic acid dehalogenase superfamily.

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0710800105

21 January 2018

Processing of X-ray diffraction data collected in oscillation mode

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0710800105

21 January 2018

A Translation-Function Approach for Heavy-Atom Location in Macromolecular Crystallography

1 reference

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21 January 2018

Comment on "The Pentacovalent Phosphorus Intermediate of a Phosphoryl Transfer Reaction"

1 reference

https://pubmed.ncbi.nlm.nih.gov/18398008

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Conformational Cycling in β-Phosphoglucomutase Catalysis: Reorientation of the β-d-Glucose 1,6-(Bis)phosphate Intermediate†

1 reference

https://pubmed.ncbi.nlm.nih.gov/18398008

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1073/PNAS.0710800105

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2008PNAS..105.5687L

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release_6qcmcisfmjeunkl4silhtyywmu

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ResearchGate publication ID

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