(Q27651521)

http://www.rcsb.org/structure/2J97

molecular biology

of

Human coronavirus 229E

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http://www.rcsb.org/structure/2J97

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5

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author name string

Rajesh Ponnusamy

1

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Ralf Moll

2

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Thomas Weimar

3

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Jeroen R Mesters

Journal of Molecular Biology

4

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language of work or name

English

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publication date

28 November 2008

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published in

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volume

383

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issue

5

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page(s)

1081-96

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describes a project that uses

plasmid design

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polymerase chain reaction

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SDS-PAGE

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protein structure determination

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dynamic light scattering

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Electrophoretic mobility shift assay

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surface plasmon resonance microscopy

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Non structural proteins 8 and 9 of human coronavirus 229E.

cites work

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12 December 2020

Efficient folding of proteins with multiple disulfide bonds in the Escherichia coli cytoplasm

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12 December 2020

Cysteine 111 affects coupling of single-stranded DNA binding to ATP hydrolysis in the herpes simplex virus type-1 origin-binding protein

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12 December 2020

Proteolytic processing at the amino terminus of human coronavirus 229E gene 1-encoded polyproteins: identification of a papain-like proteinase and its substrate.

1 reference

12 December 2020

Structure of the single-stranded-DNA-binding domain of replication protein A bound to DNA

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12 December 2020

Ultrastructure and origin of membrane vesicles associated with the severe acute respiratory syndrome coronavirus replication complex

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12 December 2020

The structure of a rigorously conserved RNA element within the SARS virus genome

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12 December 2020

Likelihood-enhanced fast translation functions

1 reference

12 December 2020

The interpretation of protein structures: Estimation of static accessibility

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12 December 2020

Newly discovered coronavirus as the primary cause of severe acute respiratory syndrome.

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12 December 2020

The CCP4 suite: programs for protein crystallography

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12 December 2020

A common core for binding single-stranded DNA: structural comparison of the single-stranded DNA-binding proteins (SSB) from E. coli and human mitochondria.

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12 December 2020

Mechanisms for redox control of gene expression

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12 December 2020

Processing of the human coronavirus 229E replicase polyproteins by the virus-encoded 3C-like proteinase: identification of proteolytic products and cleavage sites common to pp1a and pp1ab.

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12 December 2020

A novel coronavirus associated with severe acute respiratory syndrome

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12 December 2020

Identification of oxidative stress and Toll-like receptor 4 signaling as a key pathway of acute lung injury

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12 December 2020

Nucleotide sequence of the human coronavirus 229E RNA polymerase locus

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12 December 2020

The molecular biology of coronaviruses

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12 December 2020

Transmissible gastroenteritis coronavirus induces programmed cell death in infected cells through a caspase-dependent pathway.

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12 December 2020

Functional characterization of zinc-finger motif in redox regulation of RPA-ssDNA interaction

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12 December 2020

The severe acute respiratory syndrome-coronavirus replicative protein nsp9 is a single-stranded RNA-binding subunit unique in the RNA virus world.

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12 December 2020

Tissue sulfhydryl groups

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12 December 2020

Refinement of macromolecular structures by the maximum-likelihood method

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12 December 2020

Clinical progression and viral load in a community outbreak of coronavirus-associated SARS pneumonia: a prospective study

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12 December 2020

Conserved cysteine residue in the DNA-binding domain of the bovine papillomavirus type 1 E2 protein confers redox regulation of the DNA-binding activity in vitro

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12 December 2020

Evidence of oxidative stress following the viral infection of two lepidopteran insect cell lines

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12 December 2020

Processing of X-ray diffraction data collected in oscillation mode

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12 December 2020

Insights into SARS-CoV transcription and replication from the structure of the nsp7-nsp8 hexadecamer

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12 December 2020

An overview on 2-methyl-2,4-pentanediol in crystallization and in crystals of biological macromolecules

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12 December 2020

Identification of a novel coronavirus in patients with severe acute respiratory syndrome

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12 December 2020

Severe acute respiratory syndrome coronavirus phylogeny: toward consensus

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12 December 2020

A second, non-canonical RNA-dependent RNA polymerase in SARS Coronavirus

1 reference

12 December 2020

RNA replication of mouse hepatitis virus takes place at double-membrane vesicles

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12 December 2020

The GxxxG motif: a framework for transmembrane helix-helix association

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12 December 2020

The redox state of the baculovirus single-stranded DNA-binding protein LEF-3 regulates its DNA binding, unwinding, and annealing activities

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12 December 2020

The nsp9 replicase protein of SARS-coronavirus, structure and functional insights

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12 December 2020

Coronaviruses in poultry and other birds

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12 December 2020

Statistical analysis of amino acid patterns in transmembrane helices: the GxxxG motif occurs frequently and in association with beta-branched residues at neighboring positions.

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12 December 2020

A sparse matrix approach to the solubilization of overexpressed proteins

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12 December 2020

Coronavirus main proteinase (3CLpro) structure: basis for design of anti-SARS drugs

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12 December 2020

The non-structural protein Nsp10 of mouse hepatitis virus binds zinc ions and nucleic acids

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12 December 2020

The crystal structures of severe acute respiratory syndrome virus main protease and its complex with an inhibitor

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12 December 2020

Shape complementarity at protein/protein interfaces

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12 December 2020

Molecular mechanisms of severe acute respiratory syndrome (SARS)

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12 December 2020

Structure of the SARS coronavirus nucleocapsid protein RNA-binding dimerization domain suggests a mechanism for helical packaging of viral RNA

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12 December 2020

Helix to helix packing in proteins

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12 December 2020

The crystal structure of the herpes simplex virus 1 ssDNA-binding protein suggests the structural basis for flexible, cooperative single-stranded DNA binding

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12 December 2020

Structure of coronavirus main proteinase reveals combination of a chymotrypsin fold with an extra alpha-helical domain

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12 December 2020

Coot: model-building tools for molecular graphics

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12 December 2020

pH-dependent conformational flexibility of the SARS-CoV main proteinase (M(pro)) dimer: molecular dynamics simulations and multiple X-ray structure analyses

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12 December 2020

Nucleic acid recognition by OB-fold proteins

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12 December 2020

Glucose-6-phosphate dehydrogenase deficiency enhances human coronavirus 229E infection.

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12 December 2020

Identification of a new human coronavirus

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12 December 2020

Characterization and complete genome sequence of a novel coronavirus, coronavirus HKU1, from patients with pneumonia

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12 December 2020

Coronavirus replication complex formation utilizes components of cellular autophagy

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12 December 2020

Four proteins processed from the replicase gene polyprotein of mouse hepatitis virus colocalize in the cell periphery and adjacent to sites of virion assembly.

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12 December 2020

Relationship between the occurrence of cysteine in proteins and the complexity of organisms

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12 December 2020

Amino acid neighbours and detailed conformational analysis of cysteines in proteins

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12 December 2020

SARS-coronavirus replication/transcription complexes are membrane-protected and need a host factor for activity in vitro

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12 December 2020

Redox state regulates binding of p53 to sequence-specific DNA, but not to non-specific or mismatched DNA.

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12 December 2020

Zone-interference gel electrophoresis: a new method for studying weak protein-nucleic acid complexes under native equilibrium conditions

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12 December 2020

Identification of a region of the herpes simplex virus single-stranded DNA-binding protein involved in cooperative binding

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12 December 2020

Rhinovirus-induced oxidative stress and interleukin-8 elaboration involves p47-phox but is independent of attachment to intercellular adhesion molecule-1 and viral replication

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12 December 2020

Characterization of two conformational forms of the major DNA-binding protein encoded by herpes simplex virus 1

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12 December 2020