(Q27654138)

22 June 2017

Structure of the 12-subunit RNA polymerase II refined with the aid of anomalous diffraction data (English)

1 reference

22 June 2017

0 references

Peter A Meyer

1

1 reference

22 June 2017

Ping Ye

2

1 reference

22 June 2017

Man-Hee Suh

3

1 reference

22 June 2017

Mincheng Zhang

4

1 reference

22 June 2017

Jianhua Fu

5

1 reference

22 June 2017

language of work or name

English

0 references

publication date

16 March 2009

1 reference

Journal of Biological Chemistry

22 June 2017

1 reference

22 June 2017

284

1 reference

22 June 2017

19

1 reference

22 June 2017

12933-12939

1 reference

Structural basis of transcription inhibition by alpha-amanitin and implications for RNA polymerase II translocation

22 June 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2676024

Molecular basis of RNA-dependent RNA polymerase II activity

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2676024

The molecular basis of eukaryotic transcription

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2676024

CPD damage recognition by transcribing RNA polymerase II

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2676024

Structural basis of transcription: separation of RNA from DNA by RNA polymerase II

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2676024

Complete, 12-subunit RNA polymerase II at 4.1-Å resolution: Implications for the initiation of transcription

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2676024

Architecture of initiation-competent 12-subunit RNA polymerase II

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2676024

Structural basis of transcription: an RNA polymerase II elongation complex at 3.3 A resolution

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2676024

Structural basis of transcription: RNA polymerase II at 2.8 angstrom resolution

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2676024

20 March 2017

The Protein Data Bank

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2676024

Segmented anisotropic refinement of bovine ribonuclease A by the application of the rigid-body TLS model

20 March 2017

2 references

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2676024

20 March 2017

https://api.crossref.org/works/10.1074%2FJBC.M809199200

Optimal description of a protein structure in terms of multiple groups undergoing TLS motion

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2676024

Coot: model-building tools for molecular graphics

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2676024

Refinement of macromolecular structures by the maximum-likelihood method

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2676024

The CCP4 suite: programs for protein crystallography

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2676024

Structure validation by Calpha geometry: phi,psi and Cbeta deviation

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2676024

Structures of complete RNA polymerase II and its subcomplex, Rpb4/7.

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2676024

RPAP1, a novel human RNA polymerase II-associated protein affinity purified with recombinant wild-type and mutated polymerase subunits

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2676024

Complete structure of p97/valosin-containing protein reveals communication between nucleotide domains

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2676024

Structure of the Tetrahymena ribozyme: base triple sandwich and metal ion at the active site

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2676024

The role of general initiation factors in transcription by RNA polymerase II

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2676024

The positions of TFIIF and TFIIE in the RNA polymerase II transcription preinitiation complex.

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2676024

Structural basis of transcription: role of the trigger loop in substrate specificity and catalysis

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2676024

Phasing RNA polymerase II using intrinsically bound Zn atoms: an updated structural model

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2676024

Structural perspective on mutations affecting the function of multisubunit RNA polymerases

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2676024

Structural analysis of the inactive state of the Escherichia coli DNA polymerase clamp-loader complex

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2676024

Structural basis of transcription: nucleotide selection by rotation in the RNA polymerase II active center

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2676024

The RNA polymerase II machinery: structure illuminates function

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2676024

Architecture of RNA polymerase II and implications for the transcription mechanism

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2676024

Rpb4, a subunit of RNA polymerase II, enables the enzyme to transcribe at temperature extremes in vitro

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2676024

RNA polymerase II subunit RPB4 is essential for high- and low-temperature yeast cell growth

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2676024

Yeast RNA polymerase II at 5 A resolution

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2676024

A 9 A resolution X-ray crystallographic map of the large ribosomal subunit

2 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2676024

Direct incorporation of experimental phase information in model refinement.

2 June 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M809199200

Processing of X-ray diffraction data collected in oscillation mode

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M809199200

Determining the structure of an unliganded and fully glycosylated SIV gp120 envelope glycoprotein.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M809199200

Considerations for the refinement of low-resolution crystal structures

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M809199200

X-Ray Crystallographic Structure Determination of Large Asymmetric Macromolecular Assemblies

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M809199200

The application of multivariate statistical techniques improves single-wavelength anomalous diffraction phasing.

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2676024

Two dissociable subunits of yeast RNA polymerase II stimulate the initiation of transcription at a promoter in vitro.

27 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2676024

Complete RNA polymerase II elongation complex structure and its interactions with NTP and TFIIS

27 November 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/19289466

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Extending the resolution and phase-quality limits in automated model building with iterative refinement

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/19289466

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Stereochemically restrained refinement of macromolecular structures

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/19289466

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1074/JBC.M809199200

1 reference

22 June 2017

0 references

1 reference