(Q27662104)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20519496%20AND%20SRC:MED&resulttype=core&format=json

4 February 2020

title

Crystal structures of ethanolamine ammonia-lyase complexed with coenzyme B12 analogs and substrates (English)

1 reference

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4 February 2020

0 references

0 references

7

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4 February 2020

author name string

Naoki Shibata

1

1 reference

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4 February 2020

Hiroko Tamagaki

2

1 reference

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4 February 2020

Naoki Hieda

3

1 reference

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4 February 2020

Keita Akita

4

1 reference

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4 February 2020

Hirofumi Komori

5

1 reference

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4 February 2020

Yasuhito Shomura

6

1 reference

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4 February 2020

Koichi Mori

8

1 reference

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4 February 2020

Noritake Yasuoka

9

1 reference

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4 February 2020

Yoshiki Higuchi

10

1 reference

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4 February 2020

Tetsuo Toraya

11

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4 February 2020

language of work or name

English

0 references

publication date

1 June 2010

1 reference

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Journal of Biological Chemistry

4 February 2020

published in

1 reference

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4 February 2020

volume

285

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4 February 2020

issue

34

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4 February 2020

page(s)

26484-26493

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Crystal structure of the EutL shell protein of the ethanolamine ammonia lyase microcompartment

4 February 2020

cites work

1 reference

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Conserving a volatile metabolite: a role for carboxysome-like organelles in Salmonella enterica

20 March 2017

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A locking mechanism preventing radical damage in the absence of substrate, as revealed by the x-ray structure of lysine 5,6-aminomutase

20 March 2017

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Substrate-induced conformational change of a coenzyme B12-dependent enzyme: crystal structure of the substrate-free form of diol dehydratase

20 March 2017

1 reference

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The crystal structure of coenzyme B12-dependent glycerol dehydratase in complex with cobalamin and propane-1,2-diol

20 March 2017

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The crystal structure of class II ribonucleotide reductase reveals how an allosterically regulated monomer mimics a dimer

20 March 2017

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How a protein generates a catalytic radical from coenzyme B(12): X-ray structure of a diol-dehydratase-adeninylpentylcobalamin complex

20 March 2017

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Glutamate mutase from Clostridium cochlearium: the structure of a coenzyme B12-dependent enzyme provides new mechanistic insights

20 March 2017

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A new mode of B12 binding and the direct participation of a potassium ion in enzyme catalysis: X-ray structure of diol dehydratase

20 March 2017

1 reference

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Conformational changes on substrate binding to methylmalonyl CoA mutase and new insights into the free radical mechanism

20 March 2017

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How coenzyme B12 radicals are generated: the crystal structure of methylmalonyl-coenzyme A mutase at 2 A resolution

20 March 2017

1 reference

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How a protein binds B12: A 3.0 A X-ray structure of B12-binding domains of methionine synthase

20 March 2017

1 reference

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Raster3D: photorealistic molecular graphics

20 March 2017

2 references

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20 March 2017

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Coot: model-building tools for molecular graphics

21 January 2018

1 reference

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Refinement of macromolecular structures by the maximum-likelihood method

20 March 2017

1 reference

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The CCP4 suite: programs for protein crystallography

20 March 2017

1 reference

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UCSF Chimera--a visualization system for exploratory research and analysis

20 March 2017

1 reference

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Detection of biochemical pathways by probabilistic matching of phyletic vectors

20 March 2017

1 reference

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Critical role of arginine 160 of the EutB protein subunit for active site structure and radical catalysis in coenzyme B12-dependent ethanolamine ammonia-lyase.

20 March 2017

1 reference

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Dioldehydrase: an essential role for potassium ion in the homolytic cleavage of the cobalt-carbon bond in adenosylcobalamin

29 September 2017

1 reference

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Comparative model of EutB from coenzyme B12-dependent ethanolamine ammonia-lyase reveals a beta8alpha8, TIM-barrel fold and radical catalytic site structural features

29 September 2017

1 reference

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Radical catalysis in coenzyme B12-dependent isomerization (eliminating) reactions

29 September 2017

1 reference

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Geometry of metal-ligand interactions in proteins

29 September 2017

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5'-Deoxyadenosine contacts the substrate radical intermediate in the active site of ethanolamine ammonia-lyase: 2H and 13C electron nuclear double resonance studies

29 September 2017

1 reference

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The 17-gene ethanolamine (eut) operon of Salmonella typhimurium encodes five homologues of carboxysome shell proteins.

29 September 2017

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The clostridial fermentations of choline and ethanolamine. II. Requirement for a cobamide coenzyme by an ethanolamine deaminase

29 September 2017

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The clostridial fermentations of choline and ethanolamine. 1. Preparation and properties of cell-free extracts

29 September 2017

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The mechanism of adenosylcobalamin-dependent rearrangements

29 September 2017

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Cloning, sequencing, and expression of the genes encoding the adenosylcobalamin-dependent ethanolamine ammonia-lyase of Salmonella typhimurium

29 September 2017

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Identification of the substrate radical intermediate derived from ethanolamine during catalysis by ethanolamine ammonia-lyase

29 September 2017

1 reference

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Deamination of 2-aminopropanol by ethanolamine ammonia-lyase, an AdoCbl-requiring enzyme. Kinetics and isotope effects for the R and S enantiomers of the substrate.

2 June 2018

1 reference

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Overexpression, purification, and some properties of the AdoCbl-dependent ethanolamine ammonia-lyase from Salmonella typhimurium

2 June 2018

1 reference

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Evidence for the B12-dependent enzyme ethanolamine deaminase in Salmonella

2 June 2018

1 reference

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Purification and some properties of wild-type and N-terminal-truncated ethanolamine ammonia-lyase of Escherichia coli

2 June 2018

1 reference

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Interaction of the substrate radical and the 5'-deoxyadenosine-5'-methyl group in vitamin B(12) coenzyme-dependent ethanolamine deaminase

21 January 2018

1 reference

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Analysis of the electron paramagnetic resonance spectrum of a radical intermediate in the coenzyme B(12)-dependent ethanolamine ammonia-lyase catalyzed reaction of S-2-aminopropanol

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M110.125112

Processing of X-ray diffraction data collected in oscillation mode

21 January 2018

1 reference

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[27] Maximum-likelihood heavy-atom parameter refinement for multiple isomorphous replacement and multiwavelength anomalous diffraction methods.

21 January 2018

1 reference

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MOLSCRIPT: a program to produce both detailed and schematic plots of protein structures

21 January 2018

1 reference

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Release of a damaged cofactor from a coenzyme B12-dependent enzyme: X-ray structures of diol dehydratase-reactivating factor

21 January 2018

1 reference

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Radical production simulated by photoirradiation of the diol dehydratase-adeninylpentylcobalamin complex

21 January 2018

1 reference

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Catalytic roles of active-site amino acid residues of coenzyme B12-dependent diol dehydratase: protonation state of histidine and pull effect of glutamate

21 January 2018

1 reference

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Active site reactant center geometry in the Co(II)-product radical pair state of coenzyme B12-dependent ethanolamine deaminase determined by using orientation-selection electron spin-echo envelope modulation spectroscopy.

21 January 2018

1 reference

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Spin-spin interaction in ethanolamine deaminase

21 January 2018

1 reference

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Interactions of diol dehydrase and 3',4'-anhydroadenosylcobalamin: suicide inactivation by electron transfer

21 January 2018

1 reference

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Isotope effects in the transient phases of the reaction catalyzed by ethanolamine ammonia-lyase: determination of the number of exchangeable hydrogens in the enzyme-cofactor complex.

21 January 2018

1 reference

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Ethanolamine ammonia-lyase has a "base-on" binding mode for coenzyme B(12)

21 January 2018

1 reference

12 December 2020

Identification of dimethylbenzimidazole axial coordination and characterization of (14)N superhyperfine and nuclear quadrupole coupling in Cob(II)alamin bound to ethanolamine deaminase in a catalytically-engaged substrate radical-Cobalt(II) biradica

1 reference

12 December 2020

Metal-ligand geometry relevant to proteins and in proteins: sodium and potassium

1 reference

12 December 2020

The mechanism of action of ethanolamine ammonia-lyase, an adenosylcobalamin-dependent enzyme. Evidence that the hydrogen transfer mechanism involves a second intermediate hydrogen carrier in addition to the cofactor

1 reference

12 December 2020

Studies on the mechanism of action of cobamide coenzymes. Chemical properties of the enzyme-coenzyme complex

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12 December 2020

The Substrate‐Dependent Steric Course of the Ethanolamine Ammonia‐Lyase Reaction

1 reference

12 December 2020

Studies on the subunit structure of the adenosylcobalamin-dependent enzyme ethanolamine ammonia-lyase

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12 December 2020

Identifiers

DOI

10.1074/JBC.M110.125112

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20519496%20AND%20SRC:MED&resulttype=core&format=json

4 February 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20519496%20AND%20SRC:MED&resulttype=core&format=json

4 February 2020

PubMed publication ID

20519496

1 reference