(Q27670544)

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The Structure of Vimentin Linker 1 and Rod 1B Domains Characterized by Site-directed Spin-labeling Electron Paramagnetic Resonance (SDSL-EPR) and X-ray Crystallography

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The Structure of Vimentin Linker 1 and Rod 1B Domains Characterized by Site-directed Spin-labeling Electron Paramagnetic Resonance (SDSL-EPR) and X-ray Crystallography (English)

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X-ray crystallography

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Gaetano T. Montelione

8

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author name string

Atya Aziz

1

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John F Hess

2

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Madhu S Budamagunta

3

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John C Voss

4

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Alexandre P Kuzin

5

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Yuanpeng J Huang

6

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Rong Xiao

7

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Paul G FitzGerald

9

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John F Hunt

10

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language of work or name

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publication date

17 August 2012

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Journal of Biological Chemistry

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287

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34

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28349-61

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Atomic structure of vimentin coil 2

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3436525

20 March 2017

PHENIX: a comprehensive Python-based system for macromolecular structure solution

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3436525

20 March 2017

Conserved segments 1A and 2B of the intermediate filament dimer: their atomic structures and role in filament assembly

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3436525

20 March 2017

Refined structure of alpha beta-tubulin at 3.5 A resolution

1 reference

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20 March 2017

Atomic structure of the actin:DNase I complex

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3436525

20 March 2017

Coot: model-building tools for molecular graphics

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3436525

20 March 2017

Use of TLS parameters to model anisotropic displacements in macromolecular refinement

2 references

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3436525

20 March 2017

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3436525

29 September 2017

A mutation in the conserved helix termination peptide of keratin 5 in hereditary skin blistering

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3436525

20 March 2017

Intermediate filaments: molecular structure, assembly mechanism, and integration into functionally distinct intracellular Scaffolds

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3436525

20 March 2017

The cDNA sequence of a Type II cytoskeletal keratin reveals constant and variable structural domains among keratins

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3436525

20 March 2017

The cDNA sequence of a human epidermal keratin: Divergence of sequence but conservation of structure among intermediate filament proteins

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3436525

20 March 2017

A deliberate approach to screening for initial crystallization conditions of biological macromolecules

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3436525

7 April 2017

JPred: a consensus secondary structure prediction server

2 references

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3436525

7 April 2017

https://api.crossref.org/works/10.1074%2FJBC.M111.334011

21 January 2018

Site-directed spin labeling and electron paramagnetic resonance determination of vimentin head domain structure.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3436525

29 September 2017

Targeting the human cancer pathway protein interaction network by structural genomics

1 reference

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29 September 2017

Characterization of the linker 2 region in human vimentin using site-directed spin labeling and electron paramagnetic resonance

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3436525

29 September 2017

Analysis of alpha-helical coiled coils with the program TWISTER reveals a structural mechanism for stutter compensation.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3436525

29 September 2017

Intermediate filaments: molecular architecture, assembly, dynamics and polymorphism

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3436525

29 September 2017

The intermediate filament protein consensus motif of helix 2B: its atomic structure and contribution to assembly

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3436525

29 September 2017

Structure and assembly properties of the intermediate filament protein vimentin: the role of its head, rod and tail domains

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3436525

29 September 2017

Intermediate filaments

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3436525

29 September 2017

The amino acid sequence of chicken muscle desmin provides a common structural model for intermediate filament proteins.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3436525

29 September 2017

Intermediate filaments: conformity and diversity of expression and structure

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3436525

29 September 2017

Intermediate filaments: structural conservation and divergence

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3436525

29 September 2017

The molecular biology of intermediate filaments

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3436525

29 September 2017

Head and rod 1 interactions in vimentin: identification of contact sites, structure, and changes with phosphorylation using site-directed spin labeling and electron paramagnetic resonance

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3436525

2 June 2018

Structural characterization of human vimentin rod 1 and the sequencing of assembly steps in intermediate filament formation in vitro using site-directed spin labeling and electron paramagnetic resonance

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3436525

2 June 2018

High-level production of uniformly ¹⁵N- and ¹³C-enriched fusion proteins in Escherichia coli.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3436525

2 June 2018

The packing of α-helices: simple coiled-coils

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M111.334011

21 January 2018

Hendecad repeat in segment 2A and linker L2 of intermediate filament chains implies the possibility of a right-handed coiled-coil structure

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M111.334011

21 January 2018

Processing of X-ray diffraction data collected in oscillation mode

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M111.334011

21 January 2018

HELANAL: a program to characterize helix geometry in proteins.

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M111.334011

21 January 2018

Reconstitution of intermediate-sized filaments from denatured monomeric vimentin

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M111.334011

21 January 2018

Characterization of distinct early assembly units of different intermediate filament proteins

1 reference

https://pubmed.ncbi.nlm.nih.gov/22740688

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Sequence comparisons of intermediate filament chains: evidence of a unique functional/structural role for coiled-coil segment 1A and linker L1

1 reference

https://pubmed.ncbi.nlm.nih.gov/22740688

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Bovine epidermal keratin filament assembly invitro

1 reference

https://pubmed.ncbi.nlm.nih.gov/22740688

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Chemical cross-linking indicates a staggered and antiparallel protofilament of desmin intermediate filaments and characterizes one higher-level complex between protofilaments

1 reference

https://pubmed.ncbi.nlm.nih.gov/22740688

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Crystal structure of polymerization-competent actin

1 reference

https://pubmed.ncbi.nlm.nih.gov/22740688

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The conserved H1 domain of the type II keratin 1 chain plays an essential role in the alignment of nearest neighbor molecules in mouse and human keratin 1/keratin 10 intermediate filaments at the two- to four-molecule level of structure

1 reference

https://pubmed.ncbi.nlm.nih.gov/22740688

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Keratin intermediate filament structure. Crosslinking studies yield quantitative information on molecular dimensions and mechanism of assembly

1 reference

https://pubmed.ncbi.nlm.nih.gov/22740688

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Diversity of intermediate filament structure. Evidence that the alignment of coiled-coil molecules in vimentin is different from that in keratin intermediate filaments

1 reference

https://pubmed.ncbi.nlm.nih.gov/22740688

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

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