(Q27766414)

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Mutagenesis of conserved lysine residues in bacteriophage T5 5'-3' exonuclease suggests separate mechanisms of endo-and exonucleolytic cleavage

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Mutagenesis of conserved lysine residues in bacteriophage T5 5'-3' exonuclease suggests separate mechanisms of endo-and exonucleolytic cleavage (English)

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1 reference

based on heuristic

inferred from title

author name string

S J Garforth

1

author given names

S J

author last names

Garforth

1 reference

21 October 2023

T A Ceska

2

author given names

T A

author last names

Ceska

1 reference

21 October 2023

D Suck

3

author given names

D

author last names

Suck

1 reference

21 October 2023

J R Sayers

4

author given names

J R

author last names

Sayers

1 reference

21 October 2023

language of work or name

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publication date

5 January 1999

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Proceedings of the National Academy of Sciences of the United States of America

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96

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1

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38-43

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Structure of bacteriophage T4 RNase H, a 5' to 3' RNA-DNA and DNA-DNA exonuclease with sequence similarity to the RAD2 family of eukaryotic proteins

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=15089

20 March 2017

A helical arch allowing single-stranded DNA to thread through T5 5'-exonuclease

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=15089

20 March 2017

The characterization of a mammalian DNA structure-specific endonuclease

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=15089

20 March 2017

Crystal structure of Thermus aquaticus DNA polymerase

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=15089

20 March 2017

Improved methods for building protein models in electron density maps and the location of errors in these models

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=15089

20 March 2017

Structure-specific DNA cleavage by 5' nucleases

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=15089

20 March 2017

DNA structural elements required for FEN-1 binding

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=15089

20 March 2017

Structural basis for the 3'-5' exonuclease activity of Escherichia coli DNA polymerase I: a two metal ion mechanism

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=15089

7 April 2017

Structure-specific DNA binding by bacteriophage T5 5'-->3' exonuclease.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=15089

29 September 2017

Prokaryotic 5'-3' exonucleases share a common core structure with gamma-delta resolvase.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=15089

29 September 2017

Functional analysis of point mutations in human flap endonuclease-1 active site

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=15089

29 September 2017

Biochemical and mutational studies of the 5'-3' exonuclease of DNA polymerase I of Escherichia coli

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=15089

29 September 2017

Deoxy- and dideoxynucleotide discrimination and identification of critical 5' nuclease domain residues of the DNA polymerase I from Mycobacterium tuberculosis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=15089

29 September 2017

Calf RTH-1 nuclease can remove the initiator RNAs of Okazaki fragments by endonuclease activity

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=15089

29 September 2017

Calf 5' to 3' exo/endonuclease must slide from a 5' end of the substrate to perform structure-specific cleavage

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=15089

29 September 2017

Conserved sites in the 5'-3' exonuclease domain of Escherichia coli DNA polymerase

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=15089

29 September 2017

A single-strand specific endonuclease activity copurifies with overexpressed T5 D15 exonuclease

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=15089

29 September 2017

The FEN-1 family of structure-specific nucleases in eukaryotic DNA replication, recombination and repair

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=15089

2 June 2018

Properties of overexpressed phage T5 D15 exonuclease. Similarities with Escherichia coli DNA polymerase I 5'-3' exonuclease.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=15089

2 June 2018

Preliminary crystallographic studies on the D15 5' to 3' exonuclease from phage T5.

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.96.1.38

21 January 2018

AMoRe: an automated package for molecular replacement

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.96.1.38

21 January 2018

Gel retardation.

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.96.1.38

21 January 2018

Modification of an essential amino group of glutathione reductase from yeast by pyridoxal 5'-phosphate

1 reference

https://pubmed.ncbi.nlm.nih.gov/9874768

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identification of residues of T4 RNase H required for catalysis and DNA binding

1 reference

https://pubmed.ncbi.nlm.nih.gov/9874768

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Structure-specific endonucleolytic cleavage of nucleic acids by eubacterial DNA polymerases

1 reference

https://pubmed.ncbi.nlm.nih.gov/9874768

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The calf 5'- to 3'-exonuclease is also an endonuclease with both activities dependent on primers annealed upstream of the point of cleavage

1 reference

https://pubmed.ncbi.nlm.nih.gov/9874768

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The deoxyribonucleases of Escherichia coli. VII. A deoxyribonuclease induced by infection with phage T-5

1 reference

https://pubmed.ncbi.nlm.nih.gov/9874768

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Gene 6 exonuclease of bacteriophage T7. II. Mechanism of the reaction

1 reference

https://pubmed.ncbi.nlm.nih.gov/9874768

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

33 Purification and properties of Neurospora crassa Endo-exonuclease, an Enzyme which can be converted to a single-strand specific endonuclease

1 reference

https://pubmed.ncbi.nlm.nih.gov/9874768

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Transient generation of displaced single-stranded DNA during nick translation

1 reference

https://pubmed.ncbi.nlm.nih.gov/9874768

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1073/PNAS.96.1.38

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1999PNAS...96...38G

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