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Multiple Nudix family proteins possess mRNA decapping activity
scientific article
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scholarly article
1 reference
stated in
PubMed
PubMed ID
23353937
retrieved
1 December 2016
title
Multiple Nudix family proteins possess mRNA decapping activity
(English)
1 reference
stated in
PubMed
PubMed ID
23353937
retrieved
1 December 2016
main subject
Polyphosphatase DDP1 YOR163W
1 reference
stated in
GOA release 2020-03-11
author
Megerditch Kiledjian
series ordinal
3
0 references
author name string
Sophie Bail
series ordinal
2
0 references
Man-Gen Song
series ordinal
1
0 references
language of work or name
English
0 references
publication date
March 2013
0 references
published in
RNA
1 reference
stated in
PubMed
PubMed ID
23353937
retrieved
1 December 2016
volume
19
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issue
3
0 references
page(s)
390-9
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cites work
7-methylguanosine diphosphate (m(7)GDP) is not hydrolyzed but strongly bound by decapping scavenger (DcpS) enzymes and potently inhibits their activity
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3677249
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20 March 2017
Dxo1 is a new type of eukaryotic enzyme with both decapping and 5′-3′ exoribonuclease activity
1 reference
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PubMed Central
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20 March 2017
Multiple mRNA decapping enzymes in mammalian cells
1 reference
stated in
PubMed Central
reference URL
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20 March 2017
Identification of a quality-control mechanism for mRNA 5'-end capping
1 reference
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PubMed Central
reference URL
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20 March 2017
NUDT16 is a (deoxy)inosine diphosphatase, and its deficiency induces accumulation of single-strand breaks in nuclear DNA and growth arrest
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PubMed Central
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20 March 2017
Structure and function of the 5′→3′ exoribonuclease Rat1 and its activating partner Rai1
1 reference
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20 March 2017
Multiple processing body factors and the ARE binding protein TTP activate mRNA decapping
1 reference
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PubMed Central
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20 March 2017
Mammalian enzymes for preventing transcriptional errors caused by oxidative damage
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PubMed Central
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20 March 2017
Xenopus U8 snoRNA binding protein is a conserved nuclear decapping enzyme
1 reference
stated in
PubMed Central
reference URL
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20 March 2017
Crystal structure of Dcp1p and its functional implications in mRNA decapping
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3677249
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20 March 2017
DcpS can act in the 5'-3' mRNA decay pathway in addition to the 3'-5' pathway
1 reference
stated in
PubMed Central
reference URL
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20 March 2017
Functional characterization of the mammalian mRNA decapping enzyme hDcp2
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3677249
retrieved
20 March 2017
Poly(A)-binding proteins: multifunctional scaffolds for the post-transcriptional control of gene expression
1 reference
stated in
PubMed Central
reference URL
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20 March 2017
Mammalian NADH diphosphatases of the Nudix family: cloning and characterization of the human peroxisomal NUDT12 protein
1 reference
stated in
PubMed Central
reference URL
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retrieved
20 March 2017
The enhancer of decapping proteins, Edc1p and Edc2p, bind RNA and stimulate the activity of the decapping enzyme
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3677249
retrieved
20 March 2017
Human Dcp2: a catalytically active mRNA decapping enzyme located in specific cytoplasmic structures
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3677249
retrieved
20 March 2017
Identification of a human decapping complex associated with hUpf proteins in nonsense-mediated decay
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3677249
retrieved
20 March 2017
The hDcp2 protein is a mammalian mRNA decapping enzyme
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3677249
retrieved
20 March 2017
The scavenger mRNA decapping enzyme DcpS is a member of the HIT family of pyrophosphatases
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3677249
retrieved
20 March 2017
The structure of ADP-ribose pyrophosphatase reveals the structural basis for the versatility of the Nudix family
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3677249
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20 March 2017
eIF4 initiation factors: effectors of mRNA recruitment to ribosomes and regulators of translation
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3677249
retrieved
20 March 2017
The DCP2 protein is required for mRNA decapping in Saccharomyces cerevisiae and contains a functional MutT motif
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3677249
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20 March 2017
A novel context for the 'MutT' module, a guardian of cell integrity, in a diphosphoinositol polyphosphate phosphohydrolase
1 reference
stated in
PubMed Central
reference URL
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20 March 2017
The 3' to 5' degradation of yeast mRNAs is a general mechanism for mRNA turnover that requires the SKI2 DEVH box protein and 3' to 5' exonucleases of the exosome complex
1 reference
stated in
PubMed Central
reference URL
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20 March 2017
The exosome: a conserved eukaryotic RNA processing complex containing multiple 3'-->5' exoribonucleases
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3677249
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20 March 2017
Solution structure of the MutT enzyme, a nucleoside triphosphate pyrophosphohydrolase
1 reference
stated in
PubMed Central
reference URL
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20 March 2017
Proliferating cell nuclear antigen is protected from degradation by forming a complex with MutT Homolog2
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3677249
retrieved
20 March 2017
NUDT16 and ITPA play a dual protective role in maintaining chromosome stability and cell growth by eliminating dIDP/IDP and dITP/ITP from nucleotide pools in mammals
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3677249
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20 March 2017
Mouse MTH2 protein which prevents mutations caused by 8-oxoguanine nucleotides
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3677249
retrieved
20 March 2017
The MutT proteins or "Nudix" hydrolases, a family of versatile, widely distributed, "housecleaning" enzymes
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3677249
retrieved
20 March 2017
Eukaryotic mRNA decapping
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3677249
retrieved
7 April 2017
Starting at the beginning, middle, and end: translation initiation in eukaryotes
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3677249
retrieved
7 April 2017
A turnover pathway for both stable and unstable mRNAs in yeast: evidence for a requirement for deadenylation
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3677249
retrieved
7 April 2017
Yeast cells lacking 5'-->3' exoribonuclease 1 contain mRNA species that are poly(A) deficient and partially lack the 5' cap structure
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3677249
retrieved
7 April 2017
Identification of cytoplasmic capping targets reveals a role for cap homeostasis in translation and mRNA stability
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3677249
retrieved
29 September 2017
Dcp2 decapping protein modulates mRNA stability of the critical interferon regulatory factor (IRF) IRF-7.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3677249
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29 September 2017
Differential utilization of decapping enzymes in mammalian mRNA decay pathways
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3677249
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29 September 2017
Modulation of neuritogenesis by a protein implicated in X-linked mental retardation
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3677249
retrieved
29 September 2017
Identification of a cytoplasmic complex that adds a cap onto 5'-monophosphate RNA
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3677249
retrieved
29 September 2017
The control of mRNA decapping and P-body formation.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3677249
retrieved
29 September 2017
The bacterial enzyme RppH triggers messenger RNA degradation by 5' pyrophosphate removal.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3677249
retrieved
29 September 2017
Identification of an mRNA-decapping regulator implicated in X-linked mental retardation
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3677249
retrieved
29 September 2017
The Nudix hydrolase superfamily
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3677249
retrieved
29 September 2017
Differential inhibition of mRNA degradation pathways by novel cap analogs
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3677249
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29 September 2017
Ectopic expression of murine diphosphoinositol polyphosphate phosphohydrolase 1 attenuates signaling through the ERK1/2 pathway
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3677249
retrieved
29 September 2017
Poly(A)-binding-protein-mediated regulation of hDcp2 decapping in vitro
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3677249
retrieved
29 September 2017
Analysis of recombinant yeast decapping enzyme
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3677249
retrieved
29 September 2017
Functional link between the mammalian exosome and mRNA decapping
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3677249
retrieved
29 September 2017
mRNA decapping in yeast requires dissociation of the cap binding protein, eukaryotic translation initiation factor 4E.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3677249
retrieved
29 September 2017
The ends of the affair: capping and polyadenylation.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3677249
retrieved
29 September 2017
Synthesis of dinucleoside polyphosphates catalyzed by firefly luciferase and several ligases
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3677249
retrieved
29 September 2017
Dinucleoside polyphosphates-friend or foe?
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3677249
retrieved
29 September 2017
Mutations in translation initiation factors lead to increased rates of deadenylation and decapping of mRNAs in Saccharomyces cerevisiae
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3677249
retrieved
29 September 2017
The role of Glu 57 in the mechanism of the Escherichia coli MutT enzyme by mutagenesis and heteronuclear NMR.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3677249
retrieved
29 September 2017
Importance of 5'-terminal blocking structure to stabilize mRNA in eukaryotic protein synthesis
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3677249
retrieved
29 September 2017
Proteomic analysis of mouse kidney peroxisomes: identification of RP2p as a peroxisomal nudix hydrolase with acyl-CoA diphosphatase activity
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3677249
retrieved
2 June 2018
eIF4G: a multipurpose ribosome adapter?
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3677249
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2 June 2018
Membrane-bound nucleoside diphosphate kinase activity in atrial cells of frog, guinea pig, and human
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3677249
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2 June 2018
Modulation of eukaryotic mRNA stability via the cap-binding translation complex eIF4F.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3677249
retrieved
27 November 2018
5′-Terminal structure and mRNA stability
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/23353937
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
mRNA cap binding proteins: essential factors for initiating translation
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/23353937
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
Catalytic activity of vaccinia mRNA capping enzyme subunits coexpressed in Escherichia coli
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/23353937
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
Identification of a U8 snoRNA-specific binding protein
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/23353937
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
Unexpected electrophoretic migration of RNA with different 3' termini causes a RNA sizing ambiguity that can be resolved using nuclease P1-generated sequencing ladders
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/23353937
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
Analysis of mRNA decapping
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/23353937
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
Identifiers
DOI
10.1261/RNA.037309.112
1 reference
stated in
Consolidated OpenCitations Corpus – April 2017
OpenCitations bibliographic resource ID
1873490
OpenCitations bibliographic resource ID
1873490
1 reference
stated in
Consolidated OpenCitations Corpus – April 2017
OpenCitations bibliographic resource ID
1873490
PMCID
3677249
1 reference
stated in
Consolidated OpenCitations Corpus – April 2017
OpenCitations bibliographic resource ID
1873490
PubMed ID
23353937
1 reference
stated in
Consolidated OpenCitations Corpus – April 2017
OpenCitations bibliographic resource ID
1873490
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