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Protein-protein interaction map for yeast TFIID.
scientific article
Protein-protein interaction map for yeast TFIID
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instance of
scholarly article
1 reference
stated in
PubMed
PubMed ID
12582245
retrieved
1 December 2016
title
Protein-protein interaction map for yeast TFIID.
(English)
1 reference
stated in
PubMed
PubMed ID
12582245
retrieved
1 December 2016
main subject
TATA-binding protein-associated factor TAF6 YGL112C
1 reference
stated in
GOA release 2020-03-11
Taf4p YMR005W
1 reference
stated in
GOA release 2020-03-11
Taf13p YML098W
1 reference
stated in
GOA release 2020-03-11
Taf12p YDR145W
1 reference
stated in
GOA release 2020-03-11
TATA-binding protein-associated factor TAF11 YML015C
1 reference
stated in
GOA release 2020-03-11
Chromatin modification protein YBR198C
1 reference
stated in
GOA release 2020-03-11
Taf10p YDR167W
1 reference
stated in
GOA release 2020-03-11
Chromatin modification protein YMR236W
1 reference
stated in
GOA release 2020-03-11
Histone acetyltransferase YGR274C
1 reference
stated in
GOA release 2020-03-11
protein-protein interaction
1 reference
based on heuristic
inferred from title
author name string
Susan M Kraemer
series ordinal
3
0 references
Lei Zhang
series ordinal
2
0 references
Laurie A Stargell
series ordinal
4
0 references
Gayatri Yatherajam
series ordinal
1
0 references
language of work or name
English
0 references
publication date
15 February 2003
0 references
published in
Nucleic Acids Research
1 reference
stated in
PubMed
PubMed ID
12582245
retrieved
1 December 2016
volume
31
0 references
page(s)
1252-60
0 references
issue
4
0 references
cites work
Crystal structure of a subcomplex of human transcription factor TFIID formed by TATA binding protein-associated factors hTAF4 (hTAF(II)135) and hTAF12 (hTAF(II)20)
1 reference
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PubMed Central
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Molecular characterization of Saccharomyces cerevisiae TFIID.
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20 March 2017
Proteomics of the eukaryotic transcription machinery: identification of proteins associated with components of yeast TFIID by multidimensional mass spectrometry
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20 March 2017
Distinct mutations in yeast TAF(II)25 differentially affect the composition of TFIID and SAGA complexes as well as global gene expression patterns.
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20 March 2017
Fluorescence-based analyses of the effects of full-length recombinant TAF130p on the interaction of TATA box-binding protein with TATA box DNA.
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Analysis of TAF90 mutants displaying allele-specific and broad defects in transcription
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TAF-Containing and TAF-independent forms of transcriptionally active TBP in vivo.
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20 March 2017
Distinct classes of yeast promoters revealed by differential TAF recruitment
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PubMed Central
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20 March 2017
Identification of two novel TAF subunits of the yeast Saccharomyces cerevisiae TFIID complex
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PubMed Central
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20 March 2017
A comprehensive analysis of protein-protein interactions in Saccharomyces cerevisiae
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PubMed Central
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20 March 2017
The human TFIID components TAF(II)135 and TAF(II)20 and the yeast SAGA components ADA1 and TAF(II)68 heterodimerize to form histone-like pairs
1 reference
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PubMed Central
reference URL
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20 March 2017
DNA binding site selection by RNA polymerase II TAFs: a TAF(II)250-TAF(II)150 complex recognizes the initiator
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PubMed Central
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20 March 2017
The histone H3-like TAF is broadly required for transcription in yeast
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=150223
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20 March 2017
Human TAF(II)28 and TAF(II)18 interact through a histone fold encoded by atypical evolutionary conserved motifs also found in the SPT3 family
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=150223
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20 March 2017
A subset of TAF(II)s are integral components of the SAGA complex required for nucleosome acetylation and transcriptional stimulation
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=150223
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20 March 2017
Histone-like TAFs within the PCAF histone acetylase complex
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=150223
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20 March 2017
Function of TAF(II)-containing complex without TBP in transcription by RNA polymerase II
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=150223
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20 March 2017
Specific interactions and potential functions of human TAFII100
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=150223
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20 March 2017
The TAF(II)250 subunit of TFIID has histone acetyltransferase activity
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=150223
retrieved
20 March 2017
Reverse two-hybrid and one-hybrid systems to detect dissociation of protein-protein and DNA-protein interactions
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=150223
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20 March 2017
The retinoblastoma protein associates with the protein phosphatase type 1 catalytic subunit
1 reference
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=150223
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20 March 2017
Cloning of an intrinsic human TFIID subunit that interacts with multiple transcriptional activators
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=150223
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20 March 2017
Evolutionary conservation of human TATA-binding-polypeptide-associated factors TAFII31 and TAFII80 and interactions of TAFII80 with other TAFs and with general transcription factors
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=150223
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20 March 2017
The TATA-binding protein is required for transcription by all three nuclear RNA polymerases in yeast cells
1 reference
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=150223
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20 March 2017
TAF(II)250: a transcription toolbox
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=150223
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20 March 2017
The general transcription factors of RNA polymerase II
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=150223
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20 March 2017
A histone octamer-like structure within TFIID
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=150223
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20 March 2017
TAFs mediate transcriptional activation and promoter selectivity
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=150223
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7 April 2017
The role of general initiation factors in transcription by RNA polymerase II
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=150223
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7 April 2017
Biochemistry and structural biology of transcription factor IID (TFIID)
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=150223
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7 April 2017
Mapping histone fold TAFs within yeast TFIID.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=150223
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29 September 2017
Regulation of the initiation of eukaryotic transcription
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=150223
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29 September 2017
Histone folds mediate selective heterodimerization of yeast TAF(II)25 with TFIID components yTAF(II)47 and yTAF(II)65 and with SAGA component ySPT7.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=150223
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29 September 2017
Region of yeast TAF 130 required for TFIID to associate with promoters
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=150223
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29 September 2017
Derepression of DNA damage-regulated genes requires yeast TAF(II)s
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=150223
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29 September 2017
Artificially recruited TATA-binding protein fails to remodel chromatin and does not activate three promoters that require chromatin remodeling
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=150223
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29 September 2017
Assembly of partial TFIID complexes in mammalian cells reveals distinct activities associated with individual TATA box-binding protein-associated factors
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=150223
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29 September 2017
TBP-associated factors (TAFIIs): multiple, selective transcriptional mediators in common complexes
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=150223
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29 September 2017
Three-dimensional structures of the TAFII-containing complexes TFIID and TFTC.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=150223
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29 September 2017
TFIID-specific yeast TAF40 is essential for the majority of RNA polymerase II-mediated transcription in vivo
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=150223
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29 September 2017
A protein-protein interaction map of yeast RNA polymerase III.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=150223
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29 September 2017
The RNA polymerase II general transcription factors: past, present, and future.
1 reference
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=150223
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29 September 2017
Transcriptional activation by artificial recruitment in mammalian cells
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=150223
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29 September 2017
Transcriptional activation by artificial recruitment in yeast is influenced by promoter architecture and downstream sequences
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=150223
retrieved
29 September 2017
Broad, but not universal, transcriptional requirement for yTAFII17, a histone H3-like TAFII present in TFIID and SAGA.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=150223
retrieved
29 September 2017
The yeast TAF145 inhibitory domain and TFIIA competitively bind to TATA-binding protein
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=150223
retrieved
29 September 2017
The downstream core promoter element, DPE, is conserved from Drosophila to humans and is recognized by TAFII60 of Drosophila
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=150223
retrieved
29 September 2017
Considerations of transcriptional control mechanisms: do TFIID-core promoter complexes recapitulate nucleosome-like functions?
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=150223
retrieved
29 September 2017
Structure-function analysis of TAF130: identification and characterization of a high-affinity TATA-binding protein interaction domain in the N terminus of yeast TAF(II)130
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=150223
retrieved
29 September 2017
Yeast homologues of higher eukaryotic TFIID subunits
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=150223
retrieved
29 September 2017
Multiple interactions between hTAFII55 and other TFIID subunits. Requirements for the formation of stable ternary complexes between hTAFII55 and the TATA-binding protein
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=150223
retrieved
29 September 2017
Protein/DNA crosslinking of a TFIID complex reveals novel interactions downstream of the transcription start
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=150223
retrieved
29 September 2017
TBP-TAF complexes: selectivity factors for eukaryotic transcription
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=150223
retrieved
29 September 2017
Recruiting TATA-binding protein to a promoter: transcriptional activation without an upstream activator
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=150223
retrieved
29 September 2017
Holo-TFIID supports transcriptional stimulation by diverse activators and from a TATA-less promoter
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=150223
retrieved
29 September 2017
A histone fold TAF octamer within the yeast TFIID transcriptional coactivator
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=150223
retrieved
2 June 2018
Mutations in the TATA-binding protein, affecting transcriptional activation, show synthetic lethality with the TAF145 gene lacking the TAF N-terminal domain in Saccharomyces cerevisiae
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=150223
retrieved
2 June 2018
TBP-associated factors are not generally required for transcriptional activation in yeast
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=150223
retrieved
2 June 2018
Binding of TAFs to core elements directs promoter selectivity by RNA polymerase II.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=150223
retrieved
2 June 2018
Activator-specific recruitment of TFIID and regulation of ribosomal protein genes in yeast
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=150223
retrieved
27 November 2018
A unified nomenclature for TATA box binding protein (TBP)-associated factors (TAFs) involved in RNA polymerase II transcription.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=150223
retrieved
27 November 2018
TAC, a TBP-sans-TAFs complex containing the unprocessed TFIIAalphabeta precursor and the TFIIAgamma subunit
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=150223
retrieved
27 November 2018
Identification of highly conserved amino-terminal segments of dTAFII230 and yTAFII145 that are functionally interchangeable for inhibiting TBP-DNA interactions in vitro and in promoting yeast cell growth in vivo.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=150223
retrieved
27 November 2018
Largest subunit of Drosophila transcription factor IID directs assembly of a complex containing TBP and a coactivator.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=150223
retrieved
27 November 2018
Drosophila TAFII150: similarity to yeast gene TSM-1 and specific binding to core promoter DNA.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=150223
retrieved
27 November 2018
Transcriptional activity of the TFIIA four-helix bundle in vivo
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/12582245
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
Yeast TAF(II)90 is required for cell-cycle progression through G2/M but not for general transcription activation
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/12582245
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
Three-dimensional structure of the human TFIID-IIA-IIB complex
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/12582245
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
Connecting a promoter-bound protein to TBP bypasses the need for a transcriptional activation domain
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/12582245
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
Stimulation of RNA polymerase II transcription initiation by recruitment of TBP in vivo
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/12582245
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
Histone-like TAFs are essential for transcription in vivo
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/12582245
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
Identifiers
DOI
10.1093/NAR/GKG204
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PMCID
150223
0 references
PubMed ID
12582245
1 reference
stated in
PubMed
PubMed ID
12582245
retrieved
1 December 2016
ResearchGate publication ID
277397269
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