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NMD3 encodes an essential cytoplasmic protein required for stable 60S ribosomal subunits in Saccharomyces cerevisiae
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scholarly article
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PubMed
PubMed ID
10022925
retrieved
1 December 2016
title
NMD3 encodes an essential cytoplasmic protein required for stable 60S ribosomal subunits in Saccharomyces cerevisiae
(English)
1 reference
stated in
PubMed
PubMed ID
10022925
retrieved
1 December 2016
main subject
Saccharomyces cerevisiae
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Ribosome-binding protein NMD3 YHR170W
1 reference
stated in
GOA release 2020-03-11
author name string
J H Ho
series ordinal
1
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A W Johnson
series ordinal
2
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language of work or name
English
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publication date
March 1999
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published in
Molecular and Cellular Biology
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stated in
PubMed
PubMed ID
10022925
retrieved
1 December 2016
volume
19
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page(s)
2389-99
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issue
3
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cites work
The surveillance complex interacts with the translation release factors to enhance termination and degrade aberrant mRNAs
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PubMed Central
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20 March 2017
Rrp6p, the yeast homologue of the human PM-Scl 100-kDa autoantigen, is essential for efficient 5.8 S rRNA 3' end formation
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PubMed Central
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20 March 2017
Dbp6p is an essential putative ATP-dependent RNA helicase required for 60S-ribosomal-subunit assembly in Saccharomyces cerevisiae
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PubMed Central
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20 March 2017
The 3' to 5' degradation of yeast mRNAs is a general mechanism for mRNA turnover that requires the SKI2 DEVH box protein and 3' to 5' exonucleases of the exosome complex
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PubMed Central
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20 March 2017
The exosome: a conserved eukaryotic RNA processing complex containing multiple 3'-->5' exoribonucleases
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20 March 2017
Rat1p and Xrn1p are functionally interchangeable exoribonucleases that are restricted to and required in the nucleus and cytoplasm, respectively
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PubMed Central
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20 March 2017
SQT1, which encodes an essential WD domain protein of Saccharomyces cerevisiae, suppresses dominant-negative mutations of the ribosomal protein gene QSR1.
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PubMed Central
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20 March 2017
Functional analysis of Rrp7p, an essential yeast protein involved in pre-rRNA processing and ribosome assembly
1 reference
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PubMed Central
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20 March 2017
Saccharomyces cerevisiae Nip7p is required for efficient 60S ribosome subunit biogenesis.
1 reference
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PubMed Central
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20 March 2017
Nop2p is required for pre-rRNA processing and 60S ribosome subunit synthesis in yeast
1 reference
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PubMed Central
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20 March 2017
RRP5 is required for formation of both 18S and 5.8S rRNA in yeast
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PubMed Central
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20 March 2017
Evidence that the SKI antiviral system of Saccharomyces cerevisiae acts by blocking expression of viral mRNA.
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20 March 2017
The yeast NOP4 gene product is an essential nucleolar protein required for pre-rRNA processing and accumulation of 60S ribosomal subunits.
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PubMed Central
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20 March 2017
Identification of a novel component of the nonsense-mediated mRNA decay pathway by use of an interacting protein screen
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PubMed Central
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20 March 2017
Misreading of the ribosomal suppressor SUP46 due to an altered 40 S subunit in yeast
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PubMed Central
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20 March 2017
RRP1, a Saccharomyces cerevisiae gene affecting rRNA processing and production of mature ribosomal subunits
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PubMed Central
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20 March 2017
Translation initiation and ribosomal biogenesis: involvement of a putative rRNA helicase and RPL46.
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PubMed Central
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20 March 2017
GCD2, a translational repressor of the GCN4 gene, has a general function in the initiation of protein synthesis in Saccharomyces cerevisiae
1 reference
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=84031
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20 March 2017
Improved method for high efficiency transformation of intact yeast cells
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PubMed Central
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20 March 2017
Interrelationships of the pathways of mRNA decay and translation in eukaryotic cells
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PubMed Central
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7 April 2017
The poly(A) binding protein is required for poly(A) shortening and 60S ribosomal subunit-dependent translation initiation
1 reference
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PubMed Central
reference URL
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7 April 2017
The product of the yeast UPF1 gene is required for rapid turnover of mRNAs containing a premature translational termination codon
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=84031
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7 April 2017
Mutational analysis of exoribonuclease I from Saccharomyces cerevisiae
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PubMed Central
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29 September 2017
Ski6p is a homolog of RNA-processing enzymes that affects translation of non-poly(A) mRNAs and 60S ribosomal subunit biogenesis
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=84031
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29 September 2017
Identifying the right stop: determining how the surveillance complex recognizes and degrades an aberrant mRNA.
1 reference
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PubMed Central
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29 September 2017
A new nomenclature for the cytoplasmic ribosomal proteins of Saccharomyces cerevisiae.
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PubMed Central
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29 September 2017
Qsr1p, a 60S ribosomal subunit protein, is required for joining of 40S and 60S subunits
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=84031
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29 September 2017
Double-stranded RNA viruses of Saccharomyces cerevisiae.
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PubMed Central
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29 September 2017
5 S rRNA is involved in fidelity of translational reading frame.
1 reference
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PubMed Central
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29 September 2017
Nonsense-mediated mRNA decay in yeast
1 reference
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=84031
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29 September 2017
Mammalian nonsense codons can be cis effectors of nuclear mRNA half-life.
1 reference
stated in
PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=84031
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29 September 2017
Decoying the cap- mRNA degradation system by a double-stranded RNA virus and poly(A)- mRNA surveillance by a yeast antiviral system
1 reference
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=84031
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29 September 2017
Synthetic lethality of sep1 (xrn1) ski2 and sep1 (xrn1) ski3 mutants of Saccharomyces cerevisiae is independent of killer virus and suggests a general role for these genes in translation control
1 reference
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=84031
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29 September 2017
When cells stop making sense: effects of nonsense codons on RNA metabolism in vertebrate cells.
1 reference
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PubMed Central
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29 September 2017
Identification of an additional gene required for eukaryotic nonsense mRNA turnover
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=84031
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29 September 2017
Cycloheximide resistance in yeast: the gene and its portein
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PubMed Central
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29 September 2017
Mutations in elongation factor EF-1 alpha affect the frequency of frameshifting and amino acid misincorporation in Saccharomyces cerevisiae
1 reference
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PubMed Central
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29 September 2017
A mutation allowing an mRNA secondary structure diminishes translation of Saccharomyces cerevisiae iso-1-cytochrome c
1 reference
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=84031
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29 September 2017
Synthesis of ribosomes in Saccharomyces cerevisiae
1 reference
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=84031
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29 September 2017
Cloning by function: an alternative approach for identifying yeast homologs of genes from other organisms
1 reference
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=84031
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29 September 2017
Assembly of 60S ribosomal subunits is perturbed in temperature-sensitive yeast mutants defective in ribosomal protein L16
1 reference
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=84031
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29 September 2017
Nonsense codons within the Rous sarcoma virus gag gene decrease the stability of unspliced viral RNA
1 reference
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=84031
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29 September 2017
Gene products that promote mRNA turnover in Saccharomyces cerevisiae
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=84031
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29 September 2017
Characterization of the XRN1 gene encoding a 5'-->3' exoribonuclease: sequence data and analysis of disparate protein and mRNA levels of gene-disrupted yeast cells
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=84031
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29 September 2017
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PubMed Central
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29 September 2017
Phenotypic suppression and misreading in Saccharomyces cerevisiae
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=84031
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29 September 2017
Chromosomal superkiller mutants of Saccharomyces cerevisiae
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PubMed Central
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29 September 2017
Nucleolin functions in the first step of ribosomal RNA processing.
1 reference
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PubMed Central
reference URL
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2 June 2018
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PubMed Central
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2 June 2018
Frameshift suppression Saccharomyces cerevisiae. II. Genetic properties of group II suppressors.
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2 June 2018
A family of yeast expression vectors containing the phage f1 intergenic region
1 reference
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=84031
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2 June 2018
Preparation and analysis of low molecular weight RNAs and small ribonucleoproteins
1 reference
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=84031
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2 June 2018
The course of the assembly of ribosomal subunits in yeast
1 reference
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=84031
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2 June 2018
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1 reference
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PubMed Central
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27 November 2018
Identification and characterization of genes that are required for the accelerated degradation of mRNAs containing a premature translational termination codon
1 reference
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PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/10022925
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
Exchangeability of Qsr1p, a large ribosomal subunit protein required for subunit joining, suggests a novel translational regulatory mechanism
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/10022925
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12 December 2020
based on heuristic
inferred from PubMed ID database lookup
The ribosomal proteins of Saccharomyces cerevisiae. Phosphorylated and exchangeable proteins
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/10022925
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
Purification and characterization of a Saccharomyces cerevisiae exoribonuclease which yields 5'-mononucleotides by a 5' leads to 3' mode of hydrolysis
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/10022925
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
Labeling of RNA and phosphoproteins in Saccharomyces cerevisiae
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/10022925
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
Unstable β-globin mRNA in mRNA-deficient β0 thalassemia
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/10022925
retrieved
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based on heuristic
inferred from PubMed ID database lookup
mRNA surveillance by the Caenorhabditis elegans smg genes
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/10022925
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
Identifiers
DOI
10.1128/MCB.19.3.2389
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Fatcat ID
release_cjbaetmn5vaszpugtglmplbsnu
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Fatcat
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https://api.fatcat.wiki/v0/release/cjbaetmn5vaszpugtglmplbsnu
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24 November 2022
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mapped directly with Wikidata item
PMCID
84031
0 references
PubMed ID
10022925
1 reference
stated in
PubMed
PubMed ID
10022925
retrieved
1 December 2016
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