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Upf1p control of nonsense mRNA translation is regulated by Nmd2p and Upf3p
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scholarly article
1 reference
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PubMed
PubMed ID
10848586
retrieved
1 December 2016
title
Upf1p control of nonsense mRNA translation is regulated by Nmd2p and Upf3p
(English)
1 reference
stated in
PubMed
PubMed ID
10848586
retrieved
1 December 2016
main subject
Chromatin-binding exonuclease XRN1 YGL173C
1 reference
stated in
GOA release 2020-03-11
author name string
A B Maderazo
series ordinal
1
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F He
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2
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D A Mangus
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3
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A Jacobson
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4
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language of work or name
English
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publication date
July 2000
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published in
Molecular and Cellular Biology
1 reference
stated in
PubMed
PubMed ID
10848586
retrieved
1 December 2016
volume
20
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page(s)
4591-603
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issue
13
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cites work
SMG-2 is a phosphorylated protein required for mRNA surveillance in Caenorhabditis elegans and related to Upf1p of yeast
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PubMed Central
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The surveillance complex interacts with the translation release factors to enhance termination and degrade aberrant mRNAs
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Relationship between yeast polyribosomes and Upf proteins required for nonsense mRNA decay
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20 March 2017
Cloning and characterization of HUPF1, a human homolog of the Saccharomyces cerevisiae nonsense mRNA-reducing UPF1 protein
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PubMed Central
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Mammalian orthologues of a yeast regulator of nonsense transcript stability
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PubMed Central
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Identification and characterization of mutations in the UPF1 gene that affect nonsense suppression and the formation of the Upf protein complex but not mRNA turnover
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Genetic and biochemical characterization of mutations in the ATPase and helicase regions of the Upf1 protein
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20 March 2017
Identification of a novel component of the nonsense-mediated mRNA decay pathway by use of an interacting protein screen
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20 March 2017
A technique for radiolabeling DNA restriction endonuclease fragments to high specific activity
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Cleavage of Structural Proteins during the Assembly of the Head of Bacteriophage T4
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DNA sequencing with chain-terminating inhibitors
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Correlation between protein and mRNA abundance in yeast
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Interrelationships of the pathways of mRNA decay and translation in eukaryotic cells
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7 April 2017
An essential component of the decapping enzyme required for normal rates of mRNA turnover
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PubMed Central
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7 April 2017
Yeast cells lacking 5'-->3' exoribonuclease 1 contain mRNA species that are poly(A) deficient and partially lack the 5' cap structure
1 reference
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PubMed Central
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7 April 2017
Premature translational termination triggers mRNA decapping
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PubMed Central
reference URL
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7 April 2017
Deadenylation of the unstable mRNA encoded by the yeast MFA2 gene leads to decapping followed by 5'-->3' digestion of the transcript
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PubMed Central
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7 April 2017
The product of the yeast UPF1 gene is required for rapid turnover of mRNAs containing a premature translational termination codon
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PubMed Central
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7 April 2017
Recognition of yeast mRNAs as "nonsense containing" leads to both inhibition of mRNA translation and mRNA degradation: implications for the control of mRNA decapping
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PubMed Central
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29 September 2017
Yeast Upf proteins required for RNA surveillance affect global expression of the yeast transcriptome
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PubMed Central
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29 September 2017
The upf3 protein is a component of the surveillance complex that monitors both translation and mRNA turnover and affects viral propagation.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=85857
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29 September 2017
Upf1p, Nmd2p, and Upf3p are interacting components of the yeast nonsense-mediated mRNA decay pathway
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=85857
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29 September 2017
Fidelity of RNA polymerase II transcription controlled by elongation factor TFIIS.
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29 September 2017
Mof4-1 is an allele of the UPF1/IFS2 gene which affects both mRNA turnover and -1 ribosomal frameshifting efficiency
1 reference
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PubMed Central
reference URL
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29 September 2017
Mechanisms and control of mRNA turnover in Saccharomyces cerevisiae.
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29 September 2017
Interaction between Nmd2p and Upf1p is required for activity but not for dominant-negative inhibition of the nonsense-mediated mRNA decay pathway in yeast
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PubMed Central
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29 September 2017
Stabilization and ribosome association of unspliced pre-mRNAs in a yeast upf1- mutant
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29 September 2017
Nonsense-mediated mRNA decay in yeast
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PubMed Central
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29 September 2017
Characterization of cis-acting sequences and decay intermediates involved in nonsense-mediated mRNA turnover
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29 September 2017
Regulation and intracellular localization of Saccharomyces cerevisiae strand exchange protein 1 (Sep1/Xrn1/Kem1), a multifunctional exonuclease
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29 September 2017
Branch-point attack in group II introns is a highly reversible transesterification, providing a potential proofreading mechanism for 5'-splice site selection.
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29 September 2017
When cells stop making sense: effects of nonsense codons on RNA metabolism in vertebrate cells.
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Identification of an additional gene required for eukaryotic nonsense mRNA turnover
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29 September 2017
Cloning and characterization of LOS1, a Saccharomyces cerevisiae gene that affects tRNA splicing
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Identification and comparison of stable and unstable mRNAs in Saccharomyces cerevisiae
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Gene products that promote mRNA turnover in Saccharomyces cerevisiae
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A new group of putative RNA helicases
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Proofreading, NTPases and translation: successful increase in specificity
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29 September 2017
NAM7 nuclear gene encodes a novel member of a family of helicases with a Zn-ligand motif and is involved in mitochondrial functions in Saccharomyces cerevisiae
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29 September 2017
Effect of growth rate on the amounts of ribosomal and transfer ribonucleic acids in yeast
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29 September 2017
Number and distribution of polyadenylated RNA sequences in yeast
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29 September 2017
An internal open reading frame triggers nonsense-mediated decay of the yeast SPT10 mRNA.
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A single amino acid substitution in yeast eIF-5A results in mRNA stabilization
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2 June 2018
ATP is a cofactor of the Upf1 protein that modulates its translation termination and RNA binding activities
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2 June 2018
Isolation and characterization of Dcp1p, the yeast mRNA decapping enzyme
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Protein quality control: triage by chaperones and proteases
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Making sense of nonsense in yeast
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2 June 2018
Purification and characterization of the Upf1 protein: a factor involved in translation and mRNA degradation
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2 June 2018
Frameshift suppression Saccharomyces cerevisiae. II. Genetic properties of group II suppressors.
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2 June 2018
Molecular characterization of the CAN1 locus in Saccharomyces cerevisiae. A transmembrane protein without N-terminal hydrophobic signal sequence.
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2 June 2018
Linking mRNA turnover and translation: assessing the polyribosomal association of mRNA decay factors and degradative intermediates.
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27 November 2018
The polymerase chain reaction
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PubMed Central
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27 November 2018
mRNA destabilization triggered by premature translational termination depends on at least three cis-acting sequence elements and one trans-acting factor
1 reference
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PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/10848586
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
mRNA surveillance by the Caenorhabditis elegans smg genes
1 reference
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PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/10848586
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
Parameters affecting lithium acetate-mediated transformation of Saccharomyces cerevisiae and development of a rapid and simplified procedure
1 reference
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PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/10848586
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
Phenylalanyl-tRNA synthetase from yeast and its discrimination of 19 amino acids in aminoacylation of tRNA(Phe)-C-C-A and tRNA(Phe)-C-C-A(3'NH2)
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/10848586
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
On the unidirectionality of arginine uptake in the yeast Saccharomyces cerevisiae
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/10848586
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
Identification and characterization of genes that are required for the accelerated degradation of mRNAs containing a premature translational termination codon
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/10848586
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
Identifiers
DOI
10.1128/MCB.20.13.4591-4603.2000
1 reference
stated in
Consolidated OpenCitations Corpus – April 2017
OpenCitations bibliographic resource ID
2056092
OpenCitations bibliographic resource ID
2056092
1 reference
stated in
Consolidated OpenCitations Corpus – April 2017
OpenCitations bibliographic resource ID
2056092
PMCID
85857
1 reference
stated in
Consolidated OpenCitations Corpus – April 2017
OpenCitations bibliographic resource ID
2056092
PubMed ID
10848586
1 reference
stated in
Consolidated OpenCitations Corpus – April 2017
OpenCitations bibliographic resource ID
2056092
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