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Naf1 p is a box H/ACA snoRNP assembly factor
scientific article
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scholarly article
1 reference
stated in
PubMed
PubMed publication ID
12515383
retrieved
1 December 2016
title
Naf1 p is a box H/ACA snoRNP assembly factor
(English)
1 reference
stated in
PubMed
PubMed publication ID
12515383
retrieved
1 December 2016
main subject
box H/ACA snoRNP assembly
1 reference
stated in
Gene Ontology release 2020-05-02
Gene Ontology ID
GO:0000493
RNA-binding snoRNP assembly protein YNL124W
1 reference
stated in
GOA release 2020-03-11
author
David Tollervey
series ordinal
3
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Alessandro Fatica
series ordinal
1
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Mensur Dlakic
series ordinal
2
0 references
language of work or name
English
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publication date
December 2002
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published in
RNA
1 reference
stated in
PubMed
PubMed publication ID
12515383
retrieved
1 December 2016
volume
8
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issue
12
0 references
page(s)
1502-14
0 references
cites work
Ssf1p prevents premature processing of an early pre-60S ribosomal particle
1 reference
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1370356
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20 March 2017
Systematic identification of protein complexes in Saccharomyces cerevisiae by mass spectrometry
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PubMed Central
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20 March 2017
Purification of native survival of motor neurons complexes and identification of Gemin6 as a novel component
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PubMed Central
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20 March 2017
Symmetrical dimethylation of arginine residues in spliceosomal Sm protein B/B' and the Sm-like protein LSm4, and their interaction with the SMN protein.
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1370356
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20 March 2017
Gemin5, a novel WD repeat protein component of the SMN complex that binds Sm proteins
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PubMed Central
reference URL
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20 March 2017
The methylosome, a 20S complex containing JBP1 and pICln, produces dimethylarginine-modified Sm proteins
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PubMed Central
reference URL
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20 March 2017
Nog2p, a putative GTPase associated with pre-60S subunits and required for late 60S maturation steps
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PubMed Central
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20 March 2017
A well-connected and conserved nucleoplasmic helicase is required for production of box C/D and H/ACA snoRNAs and localization of snoRNP proteins.
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1370356
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20 March 2017
RNA-binding protein Nrd1 directs poly(A)-independent 3'-end formation of RNA polymerase II transcripts
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1370356
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20 March 2017
Accumulation of H/ACA snoRNPs depends on the integrity of the conserved central domain of the RNA-binding protein Nhp2p.
1 reference
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1370356
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20 March 2017
Maturation and intranuclear transport of pre-ribosomes requires Noc proteins
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PubMed Central
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20 March 2017
A comprehensive two-hybrid analysis to explore the yeast protein interactome
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20 March 2017
A functional interaction between the survival motor neuron complex and RNA polymerase II
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20 March 2017
SMN tudor domain structure and its interaction with the Sm proteins
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1370356
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20 March 2017
A nucleolar protein related to ribosomal protein L7 is required for an early step in large ribosomal subunit biogenesis
1 reference
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1370356
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20 March 2017
Identification of a regulated pathway for nuclear pre-mRNA turnover.
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1370356
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20 March 2017
Dhr1p, a putative DEAH-box RNA helicase, is associated with the box C+D snoRNP U3.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1370356
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20 March 2017
Hsl7p, the yeast homologue of human JBP1, is a protein methyltransferase
1 reference
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1370356
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20 March 2017
In vitro assembly of human H/ACA small nucleolar RNPs reveals unique features of U17 and telomerase RNAs
1 reference
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1370356
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20 March 2017
Gemin4. A novel component of the SMN complex that is found in both gems and nucleoli
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1370356
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20 March 2017
Ribosome synthesis in Saccharomyces cerevisiae
1 reference
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1370356
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20 March 2017
A yeast heterogeneous nuclear ribonucleoprotein complex associated with RNA polymerase II
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1370356
retrieved
20 March 2017
Gemin3: A novel DEAD box protein that interacts with SMN, the spinal muscular atrophy gene product, and is a component of gems
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1370356
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20 March 2017
A generic protein purification method for protein complex characterization and proteome exploration
1 reference
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1370356
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20 March 2017
Protein secondary structure prediction based on position-specific scoring matrices
1 reference
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1370356
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20 March 2017
Identification of a general transcription factor TFIIAalpha/beta homolog selectively expressed in testis
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1370356
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20 March 2017
Nop58p is a common component of the box C+D snoRNPs that is required for snoRNA stability
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1370356
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20 March 2017
Crystal structures of two Sm protein complexes and their implications for the assembly of the spliceosomal snRNPs
1 reference
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1370356
retrieved
20 March 2017
Cbf5p, a potential pseudouridine synthase, and Nhp2p, a putative RNA-binding protein, are present together with Gar1p in all H BOX/ACA-motif snoRNPs and constitute a common bipartite structure.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1370356
retrieved
20 March 2017
Nhp2p and Nop10p are essential for the function of H/ACA snoRNPs
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1370356
retrieved
20 March 2017
Gar1p binds to the small nucleolar RNAs snR10 and snR30 in vitro through a nontypical RNA binding element.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1370356
retrieved
20 March 2017
The box H + ACA snoRNAs carry Cbf5p, the putative rRNA pseudouridine synthase
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1370356
retrieved
20 March 2017
The SMN-SIP1 complex has an essential role in spliceosomal snRNP biogenesis
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1370356
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20 March 2017
Gapped BLAST and PSI-BLAST: a new generation of protein database search programs
1 reference
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1370356
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20 March 2017
Characterization of nuclear polyadenylated RNA-binding proteins in Saccharomyces cerevisiae.
1 reference
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1370356
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20 March 2017
Purification of NSP1 reveals complex formation with 'GLFG' nucleoporins and a novel nuclear pore protein NIC96
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1370356
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20 March 2017
Improved tools for biological sequence comparison
1 reference
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1370356
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20 March 2017
GAR1 is an essential small nucleolar RNP protein required for pre-rRNA processing in yeast
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1370356
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20 March 2017
Small nucleolar RNAs: an abundant group of noncoding RNAs with diverse cellular functions
1 reference
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1370356
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20 March 2017
The survival of motor neurons (SMN) protein interacts with the snoRNP proteins fibrillarin and GAR1
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1370356
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20 March 2017
Essential role for the tudor domain of SMN in spliceosomal U snRNP assembly: implications for spinal muscular atrophy
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1370356
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20 March 2017
A Method to Identify Protein Sequences That Fold into a Known Three-Dimensional Structure
1 reference
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1370356
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20 March 2017
A new approach to protein fold recognition
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1370356
retrieved
20 March 2017
The C-terminal domain of the largest subunit of RNA polymerase II interacts with a novel set of serine/arginine-rich proteins
1 reference
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1370356
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20 March 2017
Biogenesis of small nucleolar ribonucleoproteins
1 reference
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1370356
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7 April 2017
Protein trans-acting factors involved in ribosome biogenesis in Saccharomyces cerevisiae
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1370356
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7 April 2017
Function and synthesis of small nucleolar RNAs
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1370356
retrieved
7 April 2017
Analysis of compositionally biased regions in sequence databases
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1370356
retrieved
7 April 2017
Yeast snR30 is a small nucleolar RNA required for 18S rRNA synthesis
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1370356
retrieved
7 April 2017
A yeast small nuclear RNA is required for normal processing of pre-ribosomal RNA
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1370356
retrieved
7 April 2017
Small Nucleolar RNAs
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1370356
retrieved
29 September 2017
Sequence-specific interaction of U1 snRNA with the SMN complex
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1370356
retrieved
29 September 2017
Functional analysis of yeast snoRNA and snRNA 3'-end formation mediated by uncoupling of cleavage and polyadenylation.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1370356
retrieved
29 September 2017
Gene-selective developmental roles of general transcription factors
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1370356
retrieved
29 September 2017
Direct interaction of the spinal muscular atrophy disease protein SMN with the small nucleolar RNA-associated protein fibrillarin
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1370356
retrieved
29 September 2017
Cleavage/polyadenylation factor IA associates with the carboxyl-terminal domain of RNA polymerase II in Saccharomyces cerevisiae.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1370356
retrieved
29 September 2017
Specific sequences of the Sm and Sm-like (Lsm) proteins mediate their interaction with the spinal muscular atrophy disease gene product (SMN).
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1370356
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29 September 2017
Guided tours: from precursor snoRNA to functional snoRNP.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1370356
retrieved
29 September 2017
Yeast RNase III as a key processing enzyme in small nucleolar RNAs metabolism.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1370356
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29 September 2017
One-step PCR mediated strategy for the construction of conditionally expressed and epitope tagged yeast proteins
1 reference
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1370356
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29 September 2017
Processing of 3'-extended read-through transcripts by the exosome can generate functional mRNAs.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1370356
retrieved
27 November 2018
A multiprotein complex mediates the ATP-dependent assembly of spliceosomal U snRNPs
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1370356
retrieved
27 November 2018
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PMC publication ID
1370356
0 references
PubMed publication ID
12515383
1 reference
stated in
PubMed
PubMed publication ID
12515383
retrieved
1 December 2016
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