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Divergent RNA binding specificity of yeast Puf2p
scientific article
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instance of
scholarly article
1 reference
stated in
PubMed
PubMed publication ID
21685478
retrieved
1 December 2016
title
Divergent RNA binding specificity of yeast Puf2p
(English)
1 reference
stated in
PubMed
PubMed publication ID
21685478
retrieved
1 December 2016
main subject
Puf2p YPR042C
1 reference
stated in
GOA release 2020-03-11
Jsn1p YJR091C
1 reference
stated in
GOA release 2020-03-11
author name string
Yahav Yosefzon
series ordinal
1
0 references
Yvonne Y Koh
series ordinal
2
0 references
Jacqueline J Chritton
series ordinal
3
0 references
Avigail Lande
series ordinal
4
0 references
Limor Leibovich
series ordinal
5
0 references
Lavi Barziv
series ordinal
6
0 references
Christine Petzold
series ordinal
7
0 references
Zohar Yakhini
series ordinal
8
0 references
Yael Mandel-Gutfreund
series ordinal
9
0 references
Marvin Wickens
series ordinal
10
0 references
Yoav Arava
series ordinal
11
0 references
language of work or name
English
0 references
publication date
August 2011
0 references
published in
RNA
1 reference
stated in
PubMed
PubMed publication ID
21685478
retrieved
1 December 2016
volume
17
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issue
8
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page(s)
1479-88
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cites work
A screen for RNA-binding proteins in yeast indicates dual functions for many enzymes.
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PubMed Central
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Proteome-wide search reveals unexpected RNA-binding proteins in Saccharomyces cerevisiae
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A 5' cytosine binding pocket in Puf3p specifies regulation of mitochondrial mRNAs
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Structural basis for specific recognition of multiple mRNA targets by a PUF regulatory protein
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Diverse RNA-binding proteins interact with functionally related sets of RNAs, suggesting an extensive regulatory system
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Comparative analysis of mRNA targets for human PUF-family proteins suggests extensive interaction with the miRNA regulatory system
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Yeast mitochondrial biogenesis: a role for the PUF RNA-binding protein Puf3p in mRNA localization
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The transcriptional landscape of the yeast genome defined by RNA sequencing
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Structures of human Pumilio with noncognate RNAs reveal molecular mechanisms for binding promiscuity
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20 March 2017
Basis of altered RNA-binding specificity by PUF proteins revealed by crystal structures of yeast Puf4p
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PubMed Central
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20 March 2017
A new yeast PUF family protein, Puf6p, represses ASH1 mRNA translation and is required for its localization
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PubMed Central
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20 March 2017
Extensive association of functionally and cytotopically related mRNAs with Puf family RNA-binding proteins in yeast
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Genome-wide analysis of RNA-protein interactions illustrates specificity of the mRNA export machinery
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20 March 2017
Modular recognition of RNA by a human pumilio-homology domain
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20 March 2017
Crystal structure of a Pumilio homology domain
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PubMed Central
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20 March 2017
Structure of Pumilio reveals similarity between RNA and peptide binding motifs
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PubMed Central
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20 March 2017
The Puf3 protein is a transcript-specific regulator of mRNA degradation in yeast
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cis-acting sequences responsible for anterior localization of bicoid mRNA in Drosophila embryos
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MEME SUITE: tools for motif discovery and searching
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AU-rich elements: characterization and importance in mRNA degradation
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RNA recognition motifs: boring? Not quite
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A PUF family portrait: 3'UTR regulation as a way of life
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Circuitry of mRNA regulation
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Genome-wide analysis of mRNA targets for Caenorhabditis elegans FBF, a conserved stem cell regulator
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Tom20 mediates localization of mRNAs to mitochondria in a translation-dependent manner
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A single C. elegans PUF protein binds RNA in multiple modes
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Chapter 14. Analysis of RNA-protein interactions using a yeast three-hybrid system
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PubMed Central
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29 September 2017
A Caenorhabditis elegans PUF protein family with distinct RNA binding specificity
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29 September 2017
The 3'-UTR mediates the cellular localization of an mRNA encoding a short plasma membrane protein
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29 September 2017
Ribonomic analysis of human Pum1 reveals cis-trans conservation across species despite evolution of diverse mRNA target sets
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29 September 2017
Puf1p acts in combination with other yeast Puf proteins to control mRNA stability
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PubMed Central
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29 September 2017
Discovering motifs in ranked lists of DNA sequences
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29 September 2017
RNA-protein interactions in the yeast three-hybrid system: affinity, sensitivity, and enhanced library screening
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29 September 2017
Recruitment of Nanos to hunchback mRNA by Pumilio
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PubMed Central
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29 September 2017
Sequences responsible for intracellular localization of beta-actin messenger RNA also affect cell phenotype
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29 September 2017
Identification and characterization of extensive intra-molecular associations between 3'-UTRs and their ORFs
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2 June 2018
Translation of ASH1 mRNA is repressed by Puf6p-Fun12p/eIF5B interaction and released by CK2 phosphorylation
1 reference
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PubMed Central
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2 June 2018
Localization of Xenopus Vg1 mRNA by Vera protein and the endoplasmic reticulum.
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2 June 2018
A single spacer nucleotide determines the specificities of two mRNA regulatory proteins.
1 reference
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PubMed Central
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27 November 2018
Binding specificity and mRNA targets of a C. elegans PUF protein, FBF-1.
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27 November 2018
NANOS-3 and FBF proteins physically interact to control the sperm-oocyte switch in Caenorhabditis elegans
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PubMed Central
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27 November 2018
The Pumilio protein binds RNA through a conserved domain that defines a new class of RNA-binding proteins.
1 reference
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PubMed Central
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27 November 2018
Eukaryotic mRNPs may represent posttranscriptional operons
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/21685478
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
Two yeast PUF proteins negatively regulate a single mRNA
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/21685478
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
Identifiers
DOI
10.1261/RNA.2700311
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PMC publication ID
3153972
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PubMed publication ID
21685478
1 reference
stated in
PubMed
PubMed publication ID
21685478
retrieved
1 December 2016
ResearchGate publication ID
51230941
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