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Polyadenylation site choice in yeast is affected by competition between Npl3 and polyadenylation factor CFI.
scientific article
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scholarly article
1 reference
stated in
PubMed
PubMed ID
17684230
retrieved
1 December 2016
title
Polyadenylation site choice in yeast is affected by competition between Npl3 and polyadenylation factor CFI.
(English)
1 reference
stated in
PubMed
PubMed ID
17684230
retrieved
1 December 2016
main subject
Rna15p YGL044C
1 reference
stated in
GOA release 2020-03-11
MRNA-binding protein NPL3 YDR432W
1 reference
stated in
GOA release 2020-03-11
Hrp1p YOL123W
1 reference
stated in
GOA release 2020-03-11
author
Stephen Buratowski
series ordinal
5
0 references
author name string
Miriam E Bucheli
series ordinal
1
0 references
Xiaoyuan He
series ordinal
2
0 references
Craig D Kaplan
series ordinal
3
0 references
Claire L Moore
series ordinal
4
0 references
language of work or name
English
0 references
publication date
October 2007
0 references
published in
RNA
1 reference
stated in
PubMed
PubMed ID
17684230
retrieved
1 December 2016
volume
13
0 references
page(s)
1756-64
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issue
10
0 references
cites work
The hnRNPs F and H2 bind to similar sequences to influence gene expression
1 reference
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PubMed Central
reference URL
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20 March 2017
Npl3 is an antagonist of mRNA 3' end formation by RNA polymerase II.
1 reference
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PubMed Central
reference URL
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20 March 2017
Interaction between transcription elongation factors and mRNA 3'-end formation at the Saccharomyces cerevisiae GAL10-GAL7 locus.
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PubMed Central
reference URL
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20 March 2017
Rna14-Rna15 assembly mediates the RNA-binding capability of Saccharomyces cerevisiae cleavage factor IA.
1 reference
stated in
PubMed Central
reference URL
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20 March 2017
Independent functions of yeast Pcf11p in pre-mRNA 3' end processing and in transcription termination
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1986811
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20 March 2017
Five subunits are required for reconstitution of the cleavage and polyadenylation activities of Saccharomyces cerevisiae cleavage factor I.
1 reference
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PubMed Central
reference URL
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20 March 2017
Phosphorylation by Sky1p promotes Npl3p shuttling and mRNA dissociation.
1 reference
stated in
PubMed Central
reference URL
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20 March 2017
hnRNP F influences binding of a 64-kilodalton subunit of cleavage stimulation factor to mRNA precursors in mouse B cells
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1986811
retrieved
20 March 2017
Pta1, a component of yeast CF II, is required for both cleavage and poly(A) addition of mRNA precursor
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1986811
retrieved
20 March 2017
Arginine methylation facilitates the nuclear export of hnRNP proteins
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1986811
retrieved
20 March 2017
Hrp1, a sequence-specific RNA-binding protein that shuttles between the nucleus and the cytoplasm, is required for mRNA 3'-end formation in yeast
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1986811
retrieved
20 March 2017
RNA recognition by the human polyadenylation factor CstF
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1986811
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20 March 2017
Different phosphorylated forms of RNA polymerase II and associated mRNA processing factors during transcription
1 reference
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1986811
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20 March 2017
The C-terminal domain of RNA polymerase II couples mRNA processing to transcription
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1986811
retrieved
20 March 2017
Integrating mRNA processing with transcription
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1986811
retrieved
20 March 2017
Formation of mRNA 3' ends in eukaryotes: mechanism, regulation, and interrelationships with other steps in mRNA synthesis
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1986811
retrieved
20 March 2017
RNA polymerase II and the integration of nuclear events
1 reference
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1986811
retrieved
7 April 2017
Mechanism and regulation of mRNA polyadenylation
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1986811
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7 April 2017
The negative regulator of splicing element of Rous sarcoma virus promotes polyadenylation
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1986811
retrieved
29 September 2017
Terminating the transcript: breaking up is hard to do.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1986811
retrieved
29 September 2017
Drosophila Sex-lethal protein mediates polyadenylation switching in the female germline
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1986811
retrieved
29 September 2017
Connections between mRNA 3' end processing and transcription termination
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1986811
retrieved
29 September 2017
New perspectives on connecting messenger RNA 3' end formation to transcription
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1986811
retrieved
29 September 2017
Polypyrimidine tract binding protein modulates efficiency of polyadenylation.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1986811
retrieved
29 September 2017
Intron status and 3'-end formation control cotranscriptional export of mRNA.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1986811
retrieved
29 September 2017
Coupling of termination, 3' processing, and mRNA export
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1986811
retrieved
29 September 2017
Probabilistic prediction of Saccharomyces cerevisiae mRNA 3'-processing sites
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1986811
retrieved
29 September 2017
Rna15 interaction with the A-rich yeast polyadenylation signal is an essential step in mRNA 3'-end formation
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1986811
retrieved
29 September 2017
Connecting transcription to messenger RNA processing
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1986811
retrieved
29 September 2017
Arginine methylation and binding of Hrp1p to the efficiency element for mRNA 3'-end formation.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1986811
retrieved
29 September 2017
Genomic detection of new yeast pre-mRNA 3'-end-processing signals
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1986811
retrieved
29 September 2017
Control of cleavage site selection during mRNA 3' end formation by a yeast hnRNP.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1986811
retrieved
29 September 2017
A specific RNA-protein interaction at yeast polyadenylation efficiency elements.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1986811
retrieved
29 September 2017
Regulation of poly(A) site choice of several yeast mRNAs
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1986811
retrieved
29 September 2017
PCF11 encodes a third protein component of yeast cleavage and polyadenylation factor I.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1986811
retrieved
29 September 2017
Potential RNA binding proteins in Saccharomyces cerevisiae identified as suppressors of temperature-sensitive mutations in NPL3
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1986811
retrieved
29 September 2017
Redundant 3' end-forming signals for the yeast CYC1 mRNA.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1986811
retrieved
29 September 2017
Mutations in the yeast RNA14 and RNA15 genes result in an abnormal mRNA decay rate; sequence analysis reveals an RNA-binding domain in the RNA15 protein
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1986811
retrieved
29 September 2017
A simple and highly efficient procedure for rescuing autonomous plasmids from yeast
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1986811
retrieved
29 September 2017
Separation of factors required for cleavage and polyadenylation of yeast pre-mRNA
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1986811
retrieved
29 September 2017
Poly(A) signals control both transcriptional termination and initiation between the tandem GAL10 and GAL7 genes of Saccharomyces cerevisiae
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1986811
retrieved
2 June 2018
3'-end-forming signals of yeast mRNA.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1986811
retrieved
2 June 2018
Hu proteins regulate polyadenylation by blocking sites containing U-rich sequences.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1986811
retrieved
27 November 2018
RNA14 and RNA15 proteins as components of a yeast pre-mRNA 3'-end processing factor
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/17684230
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
Purification of the Saccharomyces cerevisiae cleavage/polyadenylation factor I. Separation into two components that are required for both cleavage and polyadenylation of mRNA 3' ends
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/17684230
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
Identifiers
DOI
10.1261/RNA.607207
0 references
PMCID
1986811
0 references
PubMed ID
17684230
1 reference
stated in
PubMed
PubMed ID
17684230
retrieved
1 December 2016
ResearchGate publication ID
6155761
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