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Mechanisms Governing DDK Regulation of the Initiation of DNA Replication
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5294998
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3 April 2020
title
Mechanisms Governing DDK Regulation of the Initiation of DNA Replication
(English)
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PubMed
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Europe PubMed Central
PMC publication ID
5294998
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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28025497%20AND%20SRC:MED&resulttype=core&format=json
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3 April 2020
author
Bernard P. Duncker
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2
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Europe PubMed Central
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5294998
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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28025497%20AND%20SRC:MED&resulttype=core&format=json
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3 April 2020
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Larasati
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1
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Europe PubMed Central
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5294998
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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28025497%20AND%20SRC:MED&resulttype=core&format=json
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3 April 2020
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22 December 2016
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5294998
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3 April 2020
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Europe PubMed Central
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5294998
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3 April 2020
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8
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5294998
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3 April 2020
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1
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Europe PubMed Central
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5294998
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3 April 2020
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22 December 2016
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cites work
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Crystal structure of the homology domain of the eukaryotic DNA replication proteins Sld3/Treslin
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Rif1 controls DNA replication by directing Protein Phosphatase 1 to reverse Cdc7-mediated phosphorylation of the MCM complex
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20 March 2017
Kinetochores coordinate pericentromeric cohesion and early DNA replication by Cdc7-Dbf4 kinase recruitment
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Mcm10 associates with the loaded DNA helicase at replication origins and defines a novel step in its activation
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Saccharomyces cerevisiae Dbf4 Has Unique Fold Necessary for Interaction with Rad53 Kinase
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Sld7, an Sld3-associated protein required for efficient chromosomal DNA replication in budding yeast
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The structural basis for MCM2-7 helicase activation by GINS and Cdc45.
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How do Cdc7 and cyclin-dependent kinases trigger the initiation of chromosome replication in eukaryotic cells?
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Mcm10 mediates the interaction between DNA replication and silencing machineries
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Phosphorylation of Sld2 and Sld3 by cyclin-dependent kinases promotes DNA replication in budding yeast.
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CDK-dependent phosphorylation of Sld2 and Sld3 initiates DNA replication in budding yeast
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Ordered assembly of Sld3, GINS and Cdc45 is distinctly regulated by DDK and CDK for activation of replication origins
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An N-terminal domain of Dbf4p mediates interaction with both origin recognition complex (ORC) and Rad53p and can deregulate late origin firing
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20 March 2017
Sld3, which interacts with Cdc45 (Sld4), functions for chromosomal DNA replication in Saccharomyces cerevisiae
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The human homolog of Saccharomyces cerevisiae Mcm10 interacts with replication factors and dissociates from nuclease-resistant nuclear structures in G(2) phase
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Mcm10 and the MCM2-7 complex interact to initiate DNA synthesis and to release replication factors from origins.
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A lesion in the DNA replication initiation factor Mcm10 induces pausing of elongation forks through chromosomal replication origins in Saccharomyces cerevisiae
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20 March 2017
mcm5/cdc46-bob1 bypasses the requirement for the S phase activator Cdc7p
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A RAP1-interacting protein involved in transcriptional silencing and telomere length regulation
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20 March 2017
DDK dependent regulation of TOP2A at centromeres revealed by a chemical genetics approach
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Phosphopeptide binding by Sld3 links Dbf4-dependent kinase to MCM replicative helicase activation
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A reconstituted system reveals how activating and inhibitory interactions control DDK dependent assembly of the eukaryotic replicative helicase.
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The Dbf4-Cdc7 kinase promotes Mcm2-7 ring opening to allow for single-stranded DNA extrusion and helicase assembly
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Eukaryotic origin-dependent DNA replication in vitro reveals sequential action of DDK and S-CDK kinases.
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9 May 2017
Dbf4-Cdc7 phosphorylation of Mcm2 is required for cell growth
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Cdc7p-Dbf4p kinase binds to chromatin during S phase and is regulated by both the APC and the RAD53 checkpoint pathway
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Mcm2 is a target of regulation by Cdc7-Dbf4 during the initiation of DNA synthesis
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'AND' logic gates at work: Crystal structure of Rad53 bound to Dbf4 and Cdc7.
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29 September 2017
Sld3-MCM Interaction Facilitated by Dbf4-Dependent Kinase Defines an Essential Step in Eukaryotic DNA Replication Initiation
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A new MCM modification cycle regulates DNA replication initiation
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Concerted activities of Mcm4, Sld3, and Dbf4 in control of origin activation and DNA replication fork progression
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29 September 2017
Recruitment of Mcm10 to Sites of Replication Initiation Requires Direct Binding to the Minichromosome Maintenance (MCM) Complex
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Cell-Cycle-Regulated Interaction between Mcm10 and Double Hexameric Mcm2-7 Is Required for Helicase Splitting and Activation during S Phase
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Mcm10 coordinates the timely assembly and activation of the replication fork helicase
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29 September 2017
Conserved mechanism for coordinating replication fork helicase assembly with phosphorylation of the helicase
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29 September 2017
Structural and mechanistic insights into Mcm2-7 double-hexamer assembly and function
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29 September 2017
A unique DNA entry gate serves for regulated loading of the eukaryotic replicative helicase MCM2-7 onto DNA
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29 September 2017
Domain within the helicase subunit Mcm4 integrates multiple kinase signals to control DNA replication initiation and fork progression
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29 September 2017
Protein phosphatase 1 recruitment by Rif1 regulates DNA replication origin firing by counteracting DDK activity
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29 September 2017
Prereplicative complexes assembled in vitro support origin-dependent and independent DNA replication
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29 September 2017
DNA replication checkpoint signaling depends on a Rad53-Dbf4 N-terminal interaction in Saccharomyces cerevisiae
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29 September 2017
Dbf4 and Cdc7 proteins promote DNA replication through interactions with distinct Mcm2-7 protein subunits
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29 September 2017
Mouse Rif1 is a key regulator of the replication-timing programme in mammalian cells
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29 September 2017
Genome-wide analysis reveals extensive functional interaction between DNA replication initiation and transcription in the genome of Trypanosoma brucei.
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29 September 2017
Rif1 is a global regulator of timing of replication origin firing in fission yeast
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29 September 2017
Limiting replication initiation factors execute the temporal programme of origin firing in budding yeast.
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29 September 2017
Phosphorylation of Mcm2 modulates Mcm2-7 activity and affects the cell's response to DNA damage
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PubMed Central
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29 September 2017
The effect of Ku on telomere replication time is mediated by telomere length but is independent of histone tail acetylation.
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29 September 2017
A Dbf4 mutant contributes to bypassing the Rad53-mediated block of origins of replication in response to genotoxic stress.
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29 September 2017
Damage-induced phosphorylation of Sld3 is important to block late origin firing
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29 September 2017
Epigenetically-inherited centromere and neocentromere DNA replicates earliest in S-phase
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29 September 2017
A strategy for interaction site prediction between phospho-binding modules and their partners identified from proteomic data
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29 September 2017
The Saccharomyces cerevisiae Mcm6/2 and Mcm5/3 ATPase active sites contribute to the function of the putative Mcm2-7 'gate'.
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29 September 2017
The Dbf4-Cdc7 kinase promotes S phase by alleviating an inhibitory activity in Mcm4
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29 September 2017
Incorporation into the prereplicative complex activates the Mcm2-7 helicase for Cdc7-Dbf4 phosphorylation
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29 September 2017
Structural changes in Mcm5 protein bypass Cdc7-Dbf4 function and reduce replication origin efficiency in Saccharomyces cerevisiae
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29 September 2017
Cdc7-Dbf4 phosphorylates MCM proteins via a docking site-mediated mechanism to promote S phase progression
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PubMed Central
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29 September 2017
The Cdc23 (Mcm10) protein is required for the phosphorylation of minichromosome maintenance complex by the Dfp1-Hsk1 kinase
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PubMed Central
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29 September 2017
Early-replicating heterochromatin
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29 September 2017
Centromeres are specialized replication domains in heterochromatin
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PubMed Central
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29 September 2017
Characterization of the yeast Cdc7p/Dbf4p complex purified from insect cells. Its protein kinase activity is regulated by Rad53p
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PubMed Central
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29 September 2017
Dbf4p, an essential S phase-promoting factor, is targeted for degradation by the anaphase-promoting complex
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PubMed Central
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29 September 2017
A role for the Cdc7 kinase regulatory subunit Dbf4p in the formation of initiation-competent origins of replication
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PubMed Central
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29 September 2017
Cell cycle control of Cdc7p kinase activity through regulation of Dbf4p stability.
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PubMed Central
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29 September 2017
Cell cycle regulation of DNA replication initiator factor Dbf4p
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PubMed Central
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29 September 2017
Temperature-sensitive cdc7 mutations of Saccharomyces cerevisiae are suppressed by the DBF4 gene, which is required for the G1/S cell cycle transition
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29 September 2017
Nuclear Architecture Organized by Rif1 Underpins the Replication-Timing Program
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5294998
retrieved
2 June 2018
Regulated eukaryotic DNA replication origin firing with purified proteins
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5294998
retrieved
2 June 2018
A novel non-canonical forkhead-associated (FHA) domain-binding interface mediates the interaction between Rad53 and Dbf4 proteins.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5294998
retrieved
2 June 2018
Rif1 regulates the replication timing domains on the human genome
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5294998
retrieved
2 June 2018
Conservation of replication timing reveals global and local regulation of replication origin activity
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5294998
retrieved
2 June 2018
GINS and Sld3 compete with one another for Mcm2-7 and Cdc45 binding
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5294998
retrieved
2 June 2018
Mec1 is one of multiple kinases that prime the Mcm2-7 helicase for phosphorylation by Cdc7
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5294998
retrieved
2 June 2018
Checkpoint-dependent inhibition of DNA replication initiation by Sld3 and Dbf4 phosphorylation
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5294998
retrieved
2 June 2018
Cdc7-Drf1 kinase links chromosome cohesion to the initiation of DNA replication in Xenopus egg extracts.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5294998
retrieved
2 June 2018
A mutation in Dbf4 motif M impairs interactions with DNA replication factors and confers increased resistance to genotoxic agents
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5294998
retrieved
2 June 2018
Rif1 controls DNA replication timing in yeast through the PP1 phosphatase Glc7.
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.3390%2FGENES8010003
retrieved
21 January 2018
The Dbf4 motif C zinc finger promotes DNA replication and mediates resistance to genotoxic stress
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.3390%2FGENES8010003
retrieved
21 January 2018
Origin association of Sld3, Sld7, and Cdc45 proteins is a key step for determination of origin-firing timing
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.3390%2FGENES8010003
retrieved
21 January 2018
Replication dynamics of the yeast genome.
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.3390%2FGENES8010003
retrieved
21 January 2018
Identifiers
DOI
10.3390/GENES8010003
1 reference
stated in
Europe PubMed Central
PMC publication ID
5294998
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28025497%20AND%20SRC:MED&resulttype=core&format=json
retrieved
3 April 2020
PMC publication ID
5294998
1 reference
stated in
Europe PubMed Central
PMC publication ID
5294998
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28025497%20AND%20SRC:MED&resulttype=core&format=json
retrieved
3 April 2020
PubMed ID
28025497
2 references
stated in
PubMed
stated in
Europe PubMed Central
PMC publication ID
5294998
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28025497%20AND%20SRC:MED&resulttype=core&format=json
retrieved
3 April 2020
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