(Q28144655)

Gapped BLAST and PSI-BLAST: a new generation of protein database search programs

PubMed

published in

Research in Microbiology

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volume

150

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page(s)

653-64

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issue

9-10

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cites work

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Significant dispersed recurrent DNA sequences in the Escherichia coli genome. Several new groups.

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The complete genome sequence of Escherichia coli K-12

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A novel RNA product of thetyrToperon ofEscherichia Coli

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Physical mapping of repetitive extragenic palindromic sequences in Escherichia coli and phylogenetic distribution among Escherichia coli strains and other enteric bacteria

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Convergent evolution: the need to be explicit

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Fimbrial phase variation in Escherichia coli: dependence on integration host factor and homologies with other site-specific recombinases

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Pathogenicity islands of virulent bacteria: structure, function and impact on microbial evolution

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Enhancement of serine-sensitivity by a gene encoding rhodanese-like protein in Escherichia coli

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The JUMPstart sequence: a 39 bp element common to several polysaccharide gene clusters.

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The lit gene product which blocks bacteriophage T4 late gene expression is a membrane protein encoded by a cryptic DNA element, e14.

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Excision of a P4-like cryptic prophage leads to Alp protease expression in Escherichia coli

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Genomic organization and physical mapping of the transfer RNA genes in Escherichia coli K12.

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Molecular archaeology of the Escherichia coli genome

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Enhancing transcription through the Escherichia coli hemolysin operon, hlyCABD: RfaH and upstream JUMPStart DNA sequences function together via a postinitiation mechanism

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Transcriptional organization of the S10, spc and alpha operons of Escherichia coli

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Rho-dependent transcription termination in the tyrT operon of Escherichia coli.

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Expanded sequence dependence of thermodynamic parameters improves prediction of RNA secondary structure

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Unusual nucleotide arrangement with repeated sequences in the Escherichia coli K-12 chromosome

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Integration host factor binds to a unique class of complex repetitive extragenic DNA sequences in Escherichia coli.

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A 718-kb DNA sequence of the Escherichia coli K-12 genome corresponding to the 12.7-28.0 min region on the linkage map.

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Improved tools for biological sequence comparison

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Sequence-selective interactions with RNA by CspB, CspC and CspE, members of the CspA family of Escherichia coli

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Integration of satellite bacteriophage P4 in Escherichia coli. DNA sequences of the phage and host regions involved in site-specific recombination

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Repeated sequences and open reading frames in the 3' flanking region of the gene for the RNA subunit of Escherichia coli ribonuclease P

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Low molecular weight proteins: a challenge for post-genomic research.

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Regulation of the Escherichia coli K5 capsule gene cluster by transcription antitermination.

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A whole genome approach to in vivo DNA-protein interactions in E. coli

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Control of transcription of gal repressor and isorepressor genes in Escherichia coli

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