(Q28262682)

English

The GNUMAP algorithm: unbiased probabilistic mapping of oligonucleotides from next-generation sequencing

scientific article published on 27 October 2009

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scholarly article

1 reference

Europe PubMed Central

PMC publication ID

1 July 2019

http://europepmc.org/abstract/PMC/6276904

The GNUMAP algorithm: unbiased probabilistic mapping of oligonucleotides from next-generation sequencing (English)

1 reference

Europe PubMed Central

PMC publication ID

1 July 2019

http://europepmc.org/abstract/PMC/6276904

1 reference

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author name string

Nathan L Clement

1

1 reference

Europe PubMed Central

PMC publication ID

1 July 2019

http://europepmc.org/abstract/PMC/6276904

Quinn Snell

2

1 reference

Europe PubMed Central

PMC publication ID

1 July 2019

http://europepmc.org/abstract/PMC/6276904

Mark J Clement

3

1 reference

Europe PubMed Central

PMC publication ID

1 July 2019

http://europepmc.org/abstract/PMC/6276904

Peter C Hollenhorst

4

1 reference

Europe PubMed Central

PMC publication ID

1 July 2019

http://europepmc.org/abstract/PMC/6276904

Jahnvi Purwar

5

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Europe PubMed Central

PMC publication ID

1 July 2019

http://europepmc.org/abstract/PMC/6276904

Barbara J Graves

6

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Europe PubMed Central

PMC publication ID

1 July 2019

http://europepmc.org/abstract/PMC/6276904

Bradley R Cairns

7

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Europe PubMed Central

PMC publication ID

1 July 2019

http://europepmc.org/abstract/PMC/6276904

W Evan Johnson

8

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Europe PubMed Central

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1 July 2019

http://europepmc.org/abstract/PMC/6276904

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publication date

27 October 2009

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Europe PubMed Central

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1 July 2019

http://europepmc.org/abstract/PMC/6276904

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Europe PubMed Central

PMC publication ID

1 July 2019

http://europepmc.org/abstract/PMC/6276904

26

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Europe PubMed Central

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1 July 2019

http://europepmc.org/abstract/PMC/6276904

1

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Europe PubMed Central

PMC publication ID

1 July 2019

http://europepmc.org/abstract/PMC/6276904

38-45

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Europe PubMed Central

PMC publication ID

1 July 2019

http://europepmc.org/abstract/PMC/6276904

Genome-wide mapping of in vivo protein-DNA interactions

1 reference

https://pubmed.ncbi.nlm.nih.gov/19861355

12 December 2020

based on heuristic

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Mapping short DNA sequencing reads and calling variants using mapping quality scores

1 reference

https://pubmed.ncbi.nlm.nih.gov/19861355

12 December 2020

based on heuristic

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Parallel genomic evolution and metabolic interdependence in an ancient symbiosis

1 reference

https://pubmed.ncbi.nlm.nih.gov/19861355

12 December 2020

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ALLPATHS: de novo assembly of whole-genome shotgun microreads

1 reference

https://pubmed.ncbi.nlm.nih.gov/19861355

12 December 2020

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Metrics for comparing regulatory sequences on the basis of pattern counts.

1 reference

https://pubmed.ncbi.nlm.nih.gov/19861355

12 December 2020

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Evaluation of next generation sequencing platforms for population targeted sequencing studies

1 reference

https://pubmed.ncbi.nlm.nih.gov/19861355

12 December 2020

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Comparing expression profiles of genes with similar promoter regions.

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https://pubmed.ncbi.nlm.nih.gov/19861355

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Application of massively parallel sequencing to microRNA profiling and discovery in human embryonic stem cells

1 reference

https://pubmed.ncbi.nlm.nih.gov/19861355

12 December 2020

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High-resolution profiling of histone methylations in the human genome

1 reference

https://pubmed.ncbi.nlm.nih.gov/19861355

12 December 2020

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Slider--maximum use of probability information for alignment of short sequence reads and SNP detection

1 reference

https://pubmed.ncbi.nlm.nih.gov/19861355

12 December 2020

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Genome-wide maps of chromatin state in pluripotent and lineage-committed cells

1 reference

https://pubmed.ncbi.nlm.nih.gov/19861355

12 December 2020

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SeqMap: mapping massive amount of oligonucleotides to the genome

1 reference

https://pubmed.ncbi.nlm.nih.gov/19861355

12 December 2020

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Using quality scores and longer reads improves accuracy of Solexa read mapping

1 reference

https://pubmed.ncbi.nlm.nih.gov/19861355

12 December 2020

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Ultrafast and memory-efficient alignment of short DNA sequences to the human genome

1 reference

https://pubmed.ncbi.nlm.nih.gov/19861355

12 December 2020

based on heuristic

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Mapping translocation breakpoints by next-generation sequencing

1 reference

https://pubmed.ncbi.nlm.nih.gov/19861355

12 December 2020

based on heuristic

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SOAP: short oligonucleotide alignment program

1 reference

https://pubmed.ncbi.nlm.nih.gov/19861355

12 December 2020

based on heuristic

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Sequencing of natural strains of Arabidopsis thaliana with short reads

1 reference

https://pubmed.ncbi.nlm.nih.gov/19861355

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1093/BIOINFORMATICS/BTP614

1 reference

Europe PubMed Central

PMC publication ID

1 July 2019

http://europepmc.org/abstract/PMC/6276904

DBLP publication ID

journals/bioinformatics/ClementSCHPGCJ10

1 reference

DBLP Dataset 2021-01-02

28 January 2021

PMC publication ID

1 reference

Europe PubMed Central

PMC publication ID

1 July 2019

http://europepmc.org/abstract/PMC/6276904

PubMed publication ID

1 reference

Europe PubMed Central

PMC publication ID

1 July 2019

http://europepmc.org/abstract/PMC/6276904

ResearchGate publication ID

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