(Q28277465)

English

Discriminative modelling of context-specific amino acid substitution probabilities

scientific article

In more languages

edit

Statements

instance of

scholarly article

0 references

title

Discriminative modelling of context-specific amino acid substitution probabilities (English)

0 references

author

Johannes Söding

series ordinal

3

0 references

author name string

Christof Angermüller

series ordinal

1

0 references

Andreas Biegert

series ordinal

2

0 references

language of work or name

English

0 references

publication date

15 December 2012

0 references

1 reference

28

0 references

issue

24

0 references

page(s)

3240-7

0 references

cites work

Gapped BLAST and PSI-BLAST: a new generation of protein database search programs

1 reference

stated in

Crossref

reference URL

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTS622

retrieved

21 January 2018

Periodic distributions of hydrophobic amino acids allows the definition of fundamental building blocks to align distantly related proteins.

1 reference

stated in

Crossref

reference URL

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTS622

retrieved

21 January 2018

Sequence context-specific profiles for homology searching

1 reference

stated in

Crossref

reference URL

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTS622

retrieved

21 January 2018

Context-specific amino acid substitution matrices and their use in the detection of protein homologs

1 reference

stated in

Crossref

reference URL

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTS622

retrieved

21 January 2018

Amino acid substitution matrices from protein blocks

1 reference

stated in

Crossref

reference URL

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTS622

retrieved

21 January 2018

Improved pairwise alignments of proteins in the Twilight Zone using local structure predictions

1 reference

stated in

Crossref

reference URL

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTS622

retrieved

21 January 2018

A mutation data matrix for transmembrane proteins

1 reference

stated in

Crossref

reference URL

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTS622

retrieved

21 January 2018

Assessment of template based protein structure predictions in CASP9.

1 reference

stated in

Crossref

reference URL

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTS622

retrieved

21 January 2018

SCOP: a structural classification of proteins database for the investigation of sequences and structures

1 reference

stated in

Crossref

reference URL

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTS622

retrieved

21 January 2018

Environment-specific amino acid substitution tables: tertiary templates and prediction of protein folds

1 reference

stated in

Crossref

reference URL

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTS622

retrieved

21 January 2018

HHblits: lightning-fast iterative protein sequence searching by HMM-HMM alignment

1 reference

stated in

Crossref

reference URL

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTS622

retrieved

21 January 2018

A 3D-1D substitution matrix for protein fold recognition that includes predicted secondary structure of the sequence

1 reference

stated in

Crossref

reference URL

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTS622

retrieved

21 January 2018

FUGUE: sequence-structure homology recognition using environment-specific substitution tables and structure-dependent gap penalties

1 reference

stated in

Crossref

reference URL

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTS622

retrieved

21 January 2018

Protein homology detection by HMM-HMM comparison

1 reference

stated in

Crossref

reference URL

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTS622

retrieved

21 January 2018

Protein sequence comparison and fold recognition: progress and good-practice benchmarking

1 reference

stated in

Crossref

reference URL

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTS622

retrieved

21 January 2018

TM-align: a protein structure alignment algorithm based on the TM-score

1 reference

stated in

Crossref

reference URL

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTS622

retrieved

21 January 2018

Identifiers

DOI

10.1093/BIOINFORMATICS/BTS622

1 reference

stated in

Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

2051818

DBLP publication ID

journals/bioinformatics/AngermullerBS12

1 reference

stated in

DBLP Dataset 2021-01-02

retrieved

28 January 2021

OpenCitations bibliographic resource ID

2051818

1 reference

stated in

Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

1 reference

Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

2051818

ResearchGate publication ID

232320536

0 references

(Q28277465)

Discriminative modelling of context-specific amino acid substitution probabilities

Statements

Identifiers

Sitelinks

Wikipedia(0 entries)

Wikibooks(0 entries)

Wikinews(0 entries)

Wikiquote(0 entries)

Wikisource(0 entries)

Wikiversity(0 entries)

Wikivoyage(0 entries)

Wiktionary(0 entries)

Multilingual sites(0 entries)