(Q28385948)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26071953%20AND%20SRC:MED&resulttype=core&format=json

17 February 2020

title

Chromatin and extracellular vesicle associated sperm RNAs (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26071953%20AND%20SRC:MED&resulttype=core&format=json

17 February 2020

main subject

RNA sequencing

0 references

extracellular vesicle

1 reference

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26071953%20AND%20SRC:MED&resulttype=core&format=json

17 February 2020

Meritxell Jodar

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26071953%20AND%20SRC:MED&resulttype=core&format=json

17 February 2020

author name string

Paula Mackie

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26071953%20AND%20SRC:MED&resulttype=core&format=json

17 February 2020

Sergey Moskovtsev

4

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26071953%20AND%20SRC:MED&resulttype=core&format=json

17 February 2020

Stephen A Krawetz

5

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26071953%20AND%20SRC:MED&resulttype=core&format=json

17 February 2020

language of work or name

English

0 references

publication date

13 June 2015

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26071953%20AND%20SRC:MED&resulttype=core&format=json

17 February 2020

published in

Nucleic Acids Research

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26071953%20AND%20SRC:MED&resulttype=core&format=json

17 February 2020

volume

43

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26071953%20AND%20SRC:MED&resulttype=core&format=json

17 February 2020

issue

14

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26071953%20AND%20SRC:MED&resulttype=core&format=json

17 February 2020

page(s)

6847-6859

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26071953%20AND%20SRC:MED&resulttype=core&format=json

Creative Commons Attribution-NonCommercial 4.0 International

17 February 2020

copyright license

start time

8 May 2017

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

describes a project that uses

1 reference

10 June 2022

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/efetch.fcgi?db=pmc&rettype=xml&id=4538811

cites work

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20 March 2017

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The presence, role and clinical use of spermatozoal RNAs

20 March 2017

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20 March 2017

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Large-scale proteomics and phosphoproteomics of urinary exosomes

20 March 2017

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A mitochondrial protein compendium elucidates complex I disease biology

20 March 2017

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Exosome-mediated transfer of mRNAs and microRNAs is a novel mechanism of genetic exchange between cells

20 March 2017

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CABYR, a novel calcium-binding tyrosine phosphorylation-regulated fibrous sheath protein involved in capacitation

20 March 2017

1 reference

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Chromatin architecture and nuclear RNA

20 March 2017

1 reference

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GPX5 is present in the mouse caput and cauda epididymidis lumen at three different locations

20 March 2017

1 reference

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Moderated estimation of fold change and dispersion for RNA-seq data with DESeq2

20 March 2017

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BEDTools: a flexible suite of utilities for comparing genomic features

7 April 2017

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Repbase Update, a database of eukaryotic repetitive elements

7 April 2017

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Count-based differential expression analysis of RNA sequencing data using R and Bioconductor

7 April 2017

1 reference

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HTSeq--a Python framework to work with high-throughput sequencing data

7 April 2017

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GOrilla: a tool for discovery and visualization of enriched GO terms in ranked gene lists

7 April 2017

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Quantitative and stoichiometric analysis of the microRNA content of exosomes

7 April 2017

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The long noncoding RNAs NEAT1 and MALAT1 bind active chromatin sites

29 September 2017

1 reference

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High-resolution mapping of chromatin packaging in mouse embryonic stem cells and sperm

29 September 2017

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Exosomes in human semen carry a distinctive repertoire of small non-coding RNAs with potential regulatory functions

29 September 2017

1 reference

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Implication of sperm RNAs in transgenerational inheritance of the effects of early trauma in mice

29 September 2017

1 reference

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Estimated diversity of messenger RNAs in each murine spermatozoa and their potential function during early zygotic development

29 September 2017

1 reference

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Stable C0T-1 repeat RNA is abundant and is associated with euchromatic interphase chromosomes

29 September 2017

1 reference

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Efficient cellular fractionation improves RNA sequencing analysis of mature and nascent transcripts from human tissues

29 September 2017

1 reference

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Genetic programs in human and mouse early embryos revealed by single-cell RNA sequencing

29 September 2017

1 reference

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Stability, delivery and functions of human sperm RNAs at fertilization.

29 September 2017

1 reference

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Protein targeting to subcellular organelles via MRNA localization

29 September 2017

1 reference

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Formation of triple-helical structures by the 3'-end sequences of MALAT1 and MENβ noncoding RNAs

29 September 2017

1 reference

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GFOLD: a generalized fold change for ranking differentially expressed genes from RNA-seq data

29 September 2017

1 reference

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The composition, protein genesis and significance of the inner acrosomal membrane of eutherian sperm

29 September 2017

1 reference

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Contribution of intragenic DNA methylation in mouse gametic DNA methylomes to establish oocyte-specific heritable marks

29 September 2017

1 reference

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Sperm-borne microRNA-34c is required for the first cleavage division in mouse

29 September 2017

1 reference

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Cleavage of rRNA ensures translational cessation in sperm at fertilization

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4538811

A small-RNA perspective on gametogenesis, fertilization, and early zygotic development.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4538811

Polypurine-repeat-containing RNAs: a novel class of long non-coding RNA in mammalian cells

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4538811

The sperm nucleus: chromatin, RNA, and the nuclear matrix.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4538811

Fluorescence in situ hybridization (FISH) protocol in human sperm

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4538811

Endonuclease-sensitive regions of human spermatozoal chromatin are highly enriched in promoter and CTCF binding sequences

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4538811

Distinctive chromatin in human sperm packages genes for embryo development

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4538811

Paternal contributions: new functional insights for spermatozoal RNA

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4538811

The controversy, potential and roles of spermatozoal RNA.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4538811

The role of the 3' untranslated region in mRNA sorting to the vicinity of mitochondria is conserved from yeast to human cells

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4538811

Analysis of the protein composition of the mouse sperm perinuclear theca and characterization of its major protein constituent

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4538811

Fusion of human sperm to prostasomes at acidic pH.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4538811

Binding of a phosphoprotein to the 3' untranslated region of the mouse protamine 2 mRNA temporally represses its translation

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4538811

Interaction between prostasomes and spermatozoa from human semen

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4538811

Chromatin and transcription transitions of mammalian adult germline stem cells and spermatogenesis.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4538811

Revisiting the evolution of mouse LINE-1 in the genomic era.

2 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4538811

Interrogating the transgenic genome: development of an interspecies tiling array

2 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4538811

The removal of the sperm perinuclear theca and its association with the bovine oocyte surface during fertilization.

2 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4538811

Reproductive biology: delivering spermatozoan RNA to the oocyte.

2 June 2018

1 reference

https://api.crossref.org/works/10.1093%2FNAR%2FGKV591

Cellular source and mechanisms of high transcriptome complexity in the mammalian testis

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FNAR%2FGKV591

Ontogeny and cellular localization of SRY transcripts in the human testes and its detection in spermatozoa.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FNAR%2FGKV591

Birth of mice after intracytoplasmic injection of single purified sperm nuclei and detection of messenger RNAs and MicroRNAs in the sperm nuclei.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FNAR%2FGKV591

Prostasome-like particles are involved in the transfer of P25b from the bovine epididymal fluid to the sperm surface

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FNAR%2FGKV591

Isolation of sperm nuclei and nuclear matrices from the mouse, and other rodents

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FNAR%2FGKV591

Isolating mRNA and small noncoding RNAs from human sperm

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FNAR%2FGKV591

Identification of novel transcripts in annotated genomes using RNA-Seq

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FNAR%2FGKV591

Highly purified spermatozoal RNA obtained by a novel method indicates an unusual 28S/18S rRNA ratio and suggests impaired ribosome assembly.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FNAR%2FGKV591

Chromatin signatures and retrotransposon profiling in mouse embryos reveal regulation of LINE-1 by RNA.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FNAR%2FGKV591

Pregnancy-specific {beta}-1-glycoprotein 1 and human leukocyte antigen-E mRNA in human sperm: differential expression in fertile and infertile men and evidence of a possible functional role during early development

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FNAR%2FGKV591

Cytoplasmic type 80 S ribosomes associated with yeast mitochondria. II. Evidence for the association of cytoplasmic ribosomes with the outer mitochondrial membrane in situ

21 January 2018

1 reference

12 December 2020

Microarray analysis in sperm from fertile and infertile men without basic sperm analysis abnormalities reveals a significantly different transcriptome

1 reference

12 December 2020

Cytoplasmic droplets are normal structures of human sperm but are not well preserved by routine procedures for assessing sperm morphology

1 reference

12 December 2020

The preparation of human spermatozoal RNA for clinical analysis

1 reference

12 December 2020

Poly(A) shortening accompanies the activation of translation of five mRNAs during spermiogenesis in the mouse

1 reference

12 December 2020

Identifiers

DOI

10.1093/NAR/GKV591

2 references

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26071953%20AND%20SRC:MED&resulttype=core&format=json

17 February 2020

1 reference

2 references

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26071953%20AND%20SRC:MED&resulttype=core&format=json

17 February 2020

PubMed publication ID

26071953

2 references

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26071953%20AND%20SRC:MED&resulttype=core&format=json