(Q28477828)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22087229%20AND%20SRC:MED&resulttype=core&format=json

16 January 2020

title

Characterizing the Escherichia coli O157:H7 proteome including protein associations with higher order assemblies (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22087229%20AND%20SRC:MED&resulttype=core&format=json

16 January 2020

1 reference

3

1 reference

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16 January 2020

Moo-Jin Suh

5

1 reference

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16 January 2020

Samuel H Payne

7

1 reference

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16 January 2020

author name string

Rembert Pieper

1

1 reference

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16 January 2020

Quanshun Zhang

2

1 reference

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16 January 2020

Shih-Ting Huang

4

1 reference

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16 January 2020

John C Braisted

6

1 reference

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16 January 2020

Robert D Fleischmann

8

1 reference

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16 January 2020

Scott N Peterson

9

1 reference

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16 January 2020

Saul Tzipori

10

1 reference

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16 January 2020

language of work or name

English

0 references

publication date

7 November 2011

1 reference

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16 January 2020

1 reference

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16 January 2020

volume

6

1 reference

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16 January 2020

issue

11

1 reference

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16 January 2020

page(s)

e26554

1 reference

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Creative Commons CC0 License

16 January 2020

copyright license

start time

7 November 2011

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted, dedicated to the public domain by copyright holder

0 references

cites work

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19 March 2017

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Structure of glycerol-3-phosphate dehydrogenase, an essential monotopic membrane enzyme involved in respiration and metabolism

19 March 2017

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19 March 2017

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An extensive repertoire of type III secretion effectors in Escherichia coli O157 and the role of lambdoid phages in their dissemination

19 March 2017

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The Escherichia coli proteome: past, present, and future prospects

19 March 2017

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Large-scale identification of protein-protein interaction of Escherichia coli K-12

19 March 2017

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The StcE protease contributes to intimate adherence of enterohemorrhagic Escherichia coli O157:H7 to host cells

19 March 2017

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A statistical model for identifying proteins by tandem mass spectrometry

19 March 2017

1 reference

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Empirical statistical model to estimate the accuracy of peptide identifications made by MS/MS and database search

19 March 2017

1 reference

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An automated multidimensional protein identification technology for shotgun proteomics

19 March 2017

1 reference

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Prokaryotic origin of the actin cytoskeleton

19 March 2017

1 reference

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Genome sequence of enterohaemorrhagic Escherichia coli O157:H7

19 March 2017

1 reference

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Probability-based protein identification by searching sequence databases using mass spectrometry data

19 March 2017

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Pathogenesis and diagnosis of Shiga toxin-producing Escherichia coli infections

19 March 2017

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Quantifying E. coli Proteome and Transcriptome with Single-Molecule Sensitivity in Single Cells

19 March 2017

1 reference

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Universal sample preparation method for proteome analysis

6 April 2017

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Interaction network containing conserved and essential protein complexes in Escherichia coli

7 April 2017

1 reference

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TM4 microarray software suite

7 April 2017

1 reference

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Exponentially modified protein abundance index (emPAI) for estimation of absolute protein amount in proteomics by the number of sequenced peptides per protein

7 April 2017

1 reference

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In vivo versus in vitro protein abundance analysis of Shigella dysenteriae type 1 reveals changes in the expression of proteins involved in virulence, stress and energy metabolism

7 April 2017

1 reference

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LEEways: tales of EPEC, ATEC and EHEC.

29 September 2017

1 reference

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Bacterial translation elongation factor EF-Tu interacts and colocalizes with actin-like MreB protein

29 September 2017

1 reference

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Current trends in quantitative proteomics

29 September 2017

1 reference

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Repeatability and reproducibility in proteomic identifications by liquid chromatography-tandem mass spectrometry

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3210124

Performance metrics for liquid chromatography-tandem mass spectrometry systems in proteomics analyses

29 September 2017

1 reference

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The Shigella dysenteriae serotype 1 proteome, profiled in the host intestinal environment, reveals major metabolic modifications and increased expression of invasive proteins

29 September 2017

1 reference

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Exploring the inner membrane proteome of Escherichia coli: which proteins are eluding detection and why?

29 September 2017

1 reference

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Bacterial cell division: assembly, maintenance and disassembly of the Z ring

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3210124

Unraveling new roles for minor components of the E. coli RNA degradosome

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3210124

The dynamic nature of the bacterial cytoskeleton

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3210124

Comparison of two label-free global quantitation methods, APEX and 2D gel electrophoresis, applied to the Shigella dysenteriae proteome

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3210124

The defective prophage pool of Escherichia coli O157: prophage-prophage interactions potentiate horizontal transfer of virulence determinants

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3210124

Initiation of ribosome degradation during starvation in Escherichia coli

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3210124

Evaluation of procedures for outer membrane isolation from Campylobacter jejuni

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3210124

The APEX Quantitative Proteomics Tool: generating protein quantitation estimates from LC-MS/MS proteomics results

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3210124

Absolute protein expression profiling estimates the relative contributions of transcriptional and translational regulation.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3210124

Comparative proteomic analysis of Staphylococcus aureus strains with differences in resistance to the cell wall-targeting antibiotic vancomycin

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3210124

A uniform proteomics MS/MS analysis platform utilizing open XML file formats

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3210124

Advances in proteomics data analysis and display using an accurate mass and time tag approach.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3210124

Bacterial DNA segregation by dynamic SopA polymers

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3210124

Protein complexes of the Escherichia coli cell envelope.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3210124

The continuing evolution of shotgun proteomics.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3210124

Relationships of the Escherichia coli O157, O111, and O55 O-antigen gene clusters with those of Salmonella enterica and Citrobacter freundii, which express identical O antigens

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3210124

Comparative proteomic analysis of extracellular proteins of enterohemorrhagic and enteropathogenic Escherichia coli strains and their ihf and ler mutants

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3210124

Genome-wide analysis of lipoprotein expression in Escherichia coli MG1655.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3210124

Multidimensional proteome analysis of human mammary epithelial cells

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3210124

Prophages and bacterial genomics: what have we learned so far?

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3210124

Toward a protein profile of Escherichia coli: comparison to its transcription profile

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3210124

Multidimensional peptide separations in proteomics

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3210124

Nationwide study of haemolytic uraemic syndrome: clinical, microbiological, and epidemiological features.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3210124

Escherichia coli O157:H7 strains that express Shiga toxin (Stx) 2 alone are more neurotropic for gnotobiotic piglets than are isotypes producing only Stx1 or both Stx1 and Stx2.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3210124

Shiga toxin-producing Escherichia coli infection: temporal and quantitative relationships among colonization, toxin production, and systemic disease

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3210124

Protein folding in the bacterial periplasm

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3210124

Secretion of extracellular proteins by enterohemorrhagic Escherichia coli via a putative type III secretion system

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3210124

Assembly-defective OmpC mutants of Escherichia coli K-12.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3210124

Glycerol kinase of Escherichia coli is activated by interaction with the glycerol facilitator

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3210124

Hemolytic-uremic syndrome and enterohemorrhagic Escherichia coli

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3210124

Hemorrhagic Colitis Associated with a RareEscherichia coliSerotype

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3210124

Effect of Ethylenediaminetetraacetic Acid, Triton X-100, and Lysozyme on the Morphology and Chemical Composition of Isolated Cell Walls of Escherichia coli

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3210124

Solubilization of the cytoplasmic membrane of Escherichia coli by Triton X-100.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3210124

Nucleotide sequence and gene-polypeptide relationships of the glpABC operon encoding the anaerobic sn-glycerol-3-phosphate dehydrogenase of Escherichia coli K-12.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3210124

Illnesses associated with Escherichia coli O157:H7 infections. A broad clinical spectrum

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3210124

Existence of abnormal protein aggregates in healthy Escherichia coli cells

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3210124

Identification of thermolabile Escherichia coli proteins: prevention and reversion of aggregation by DnaK and ClpB.

2 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3210124

The 2011 Shiga toxin-producing Escherichia coli O104:H4 German outbreak: a lesson in genomic plasticity.

2 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3210124

Transcriptomic analysis for genetic mechanisms of the factors related to biofilm formation in Escherichia coli O157:H7.

27 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3210124

Complexome of Escherichia coli envelope proteins under normal physiological conditions.

27 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3210124

Determination of molecular masses of proteins in solution: Implementation of an HPLC size exclusion chromatography and laser light scattering service in a core laboratory.

27 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3210124

Size-exclusion chromatography with on-line light scattering.

27 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3210124

Solubilization of protein aggregates by the acid stress chaperones HdeA and HdeB.

27 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3210124

Proteomic characterization of enterohemorrhagic escherichia coli O157:H7 in the oxidation-induced viable but non-culturable state.

27 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3210124

InsPecT: identification of posttranslationally modified peptides from tandem mass spectra

27 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3210124

Only a small subset of the horizontally transferred chromosomal genes in Escherichia coli are translated into proteins.

27 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3210124

StcE, a metalloprotease secreted by Escherichia coli O157:H7, specifically cleaves C1 esterase inhibitor.

27 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3210124

The Tol/Pal system function requires an interaction between the C-terminal domain of TolA and the N-terminal domain of TolB.

27 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3210124

Comparison of 2-D LC and 3-D LC with post- and pre-tryptic-digestion SEC fractionation for proteome analysis of normal human liver tissue

27 November 2018

1 reference

12 December 2020

Germany reels in the wake of E coli outbreak

1 reference

12 December 2020

Genetic dissection of the roles of chaperones and proteases in protein folding and degradation in the Escherichia coli cytosol

1 reference

12 December 2020

Comparison of methods used to separate the inner and outer membranes of cell envelopes of Campylobacter spp

1 reference

12 December 2020

10.1371/JOURNAL.PONE.0026554

Identifiers

DOI

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22087229%20AND%20SRC:MED&resulttype=core&format=json

16 January 2020

0 references

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22087229%20AND%20SRC:MED&resulttype=core&format=json

16 January 2020

PubMed publication ID

22087229

1 reference