(Q28534226)

English

Complete genome analysis of three Acinetobacter baumannii clinical isolates in China for insight into the diversification of drug resistance elements

scientific article (publication date: 2013)

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scholarly article

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Complete genome analysis of three Acinetobacter baumannii clinical isolates in China for insight into the diversification of drug resistance elements (English)

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Acinetobacter baumannii

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based on heuristic

inferred from title

whole genome sequencing

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based on heuristic

inferred from title

author name string

Lingxiang Zhu

1

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Zhongqiang Yan

2

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Zhaojun Zhang

3

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Qiming Zhou

4

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Jinchun Zhou

5

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Edward K Wakeland

6

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Xiangdong Fang

7

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Zhenyu Xuan

8

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Dingxia Shen

9

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Quan-Zhen Li

10

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language of work or name

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publication date

2013

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8

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6

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e66584

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copyright license

Creative Commons Attribution 4.0 International

24 June 2013

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April 2022 Public Data File from Crossref

copyright status

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Identification of a general O-linked protein glycosylation system in Acinetobacter baumannii and its role in virulence and biofilm formation

1 reference

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19 March 2017

IslandViewer: an integrated interface for computational identification and visualization of genomic islands

1 reference

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19 March 2017

The CGView Server: a comparative genomics tool for circular genomes

1 reference

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19 March 2017

RNAmmer: consistent and rapid annotation of ribosomal RNA genes

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19 March 2017

Identifying bacterial genes and endosymbiont DNA with Glimmer

1 reference

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19 March 2017

Comparative genomics of multidrug resistance in Acinetobacter baumannii

1 reference

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19 March 2017

ISfinder: the reference centre for bacterial insertion sequences

1 reference

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19 March 2017

tRNAscan-SE: a program for improved detection of transfer RNA genes in genomic sequence

2 references

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19 March 2017

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0066584

21 January 2018

Mauve: multiple alignment of conserved genomic sequence with rearrangements

1 reference

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7 April 2017

progressiveMauve: multiple genome alignment with gene gain, loss and rearrangement

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7 April 2017

CRISPR/Cas, the immune system of bacteria and archaea

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7 April 2017

ACT: the Artemis Comparison Tool

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7 April 2017

Global evolution of multidrug-resistant Acinetobacter baumannii clonal lineages.

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29 September 2017

Natural transformation facilitates transfer of transposons, integrons and gene cassettes between bacterial species.

1 reference

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29 September 2017

PIPS: pathogenicity island prediction software.

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29 September 2017

Complete genome sequence of multidrug-resistant Acinetobacter baumannii strain 1656-2, which forms sturdy biofilm

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3691203

29 September 2017

Genomic analysis of the multidrug-resistant Acinetobacter baumannii strain MDR-ZJ06 widely spread in China

1 reference

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29 September 2017

Genomic comparison of multi-drug resistant invasive and colonizing Acinetobacter baumannii isolated from diverse human body sites reveals genomic plasticity

1 reference

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29 September 2017

Genome sequence of Acinetobacter baumannii MDR-TJ.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3691203

29 September 2017

Genome sequence of a dominant, multidrug-resistant Acinetobacter baumannii strain, TCDC-AB0715

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3691203

29 September 2017

Efflux-mediated antibiotic resistance in Acinetobacter spp.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3691203

29 September 2017

Genomewide analysis of divergence of antibiotic resistance determinants in closely related isolates of Acinetobacter baumannii

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3691203

29 September 2017

Inactivation of phospholipase D diminishes Acinetobacter baumannii pathogenesis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3691203

29 September 2017

Worldwide dissemination of the blaOXA-23 carbapenemase gene of Acinetobacter baumannii

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3691203

29 September 2017

Reordering contigs of draft genomes using the Mauve aligner

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3691203

29 September 2017

Acinetobacter baumannii: emergence of a successful pathogen

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3691203

29 September 2017

Whole-genome pyrosequencing of an epidemic multidrug-resistant Acinetobacter baumannii strain belonging to the European clone II group

1 reference

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29 September 2017

Multidrug-resistant organisms in military wounds from Iraq and Afghanistan

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3691203

29 September 2017

Ori-Finder: a web-based system for finding oriCs in unannotated bacterial genomes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3691203

29 September 2017

Acinetobacter baumannii outer membrane protein A targets the nucleus and induces cytotoxicity.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3691203

29 September 2017

CRISPRFinder: a web tool to identify clustered regularly interspaced short palindromic repeats

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3691203

29 September 2017

Multidrug-resistant Acinetobacter infection mortality rate and length of hospitalization

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3691203

29 September 2017

New insights into Acinetobacter baumannii pathogenesis revealed by high-density pyrosequencing and transposon mutagenesis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3691203

29 September 2017

Predictive biomarkers for drug-resistant Acinetobacter baumannii isolates with bla(TEM-1), AmpC-type bla and integrase 1 genotypes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3691203

29 September 2017

Outbreak of infection by carbapenem-resistant Acinetobacter baumannii producing the carbapenemase OXA-58 in Belgium

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3691203

29 September 2017

Carbapenem resistance in Acinetobacter baumannii: mechanisms and epidemiology

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3691203

29 September 2017

GC-Profile: a web-based tool for visualizing and analyzing the variation of GC content in genomic sequences

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3691203

29 September 2017

Multilocus sequence typing of bacteria

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3691203

29 September 2017

Genetic structures at the origin of acquisition and expression of the carbapenem-hydrolyzing oxacillinase gene blaOXA-58 in Acinetobacter baumannii

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3691203

29 September 2017

Outbreak of carbapenem-resistant Acinetobacter baumannii producing the carbapenemase OXA-23 in a tertiary care hospital of Papeete, French Polynesia

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3691203

29 September 2017

Development of a multilocus sequence typing scheme for characterization of clinical isolates of Acinetobacter baumannii.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3691203

29 September 2017

Expression of the RND-type efflux pump AdeABC in Acinetobacter baumannii is regulated by the AdeRS two-component system

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3691203

29 September 2017

Genomic islands in pathogenic and environmental microorganisms

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3691203

29 September 2017

HGT-DB: a database of putative horizontally transferred genes in prokaryotic complete genomes

1 reference

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29 September 2017

Endemic carbapenem resistance associated with OXA-40 carbapenemase among Acinetobacter baumannii isolates from a hospital in northern Spain

1 reference

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29 September 2017

Interactions among strategies associated with bacterial infection: pathogenicity, epidemicity, and antibiotic resistance

1 reference

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29 September 2017

OXA-24, a novel class D beta-lactamase with carbapenemase activity in an Acinetobacter baumannii clinical strain

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3691203

29 September 2017

Mutation in the gyrA gene of quinolone-resistant clinical isolates of Acinetobacter baumannii

1 reference

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29 September 2017

Complete genome sequence of Acinetobacter baumannii MDR-TJ and insights into its mechanism of antibiotic resistance

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3691203

2 June 2018

Susceptibility patterns and molecular epidemiology of multidrug-resistant Acinetobacter baumannii strains from three military hospitals in China.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3691203

2 June 2018

Comparative genome sequence analysis of multidrug-resistant Acinetobacter baumannii

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3691203

2 June 2018

Comparative analysis of Acinetobacters: three genomes for three lifestyles

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3691203

2 June 2018

Energetic components VirD4, VirB11 and VirB4 mediate early DNA transfer reactions required for bacterial type IV secretion.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3691203

2 June 2018

Quinolone-resistance mutations in the topoisomerase IV parC gene of Acinetobacter baumannii.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3691203

2 June 2018

Antimicrobial resistance among Gram-negative bacilli causing infections in intensive care unit patients in the United States between 1993 and 2004.

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0066584

21 January 2018

Transferable imipenem-resistance in Acinetobacter species from a clinical source.

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0066584

21 January 2018

Clonal spread of carbapenem-resistant OXA-23-positive Acinetobacter baumannii in a Bulgarian university hospital

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0066584

21 January 2018

Wide dissemination of OXA-23-producing carbapenem-resistant Acinetobacter baumannii clonal complex 22 in multiple cities of China.

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0066584

21 January 2018

Emergence and dissemination of blaOXA-23-carrying imipenem-resistant Acinetobacter sp in a regional hospital in Taiwan.

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0066584

21 January 2018

Plasmid-mediated horizontal gene transfer is a coevolutionary process.

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0066584

21 January 2018

AbaR4 replaces AbaR3 in a carbapenem-resistant Acinetobacter baumannii isolate belonging to global clone 1 from an Australian hospital

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0066584

21 January 2018

The VirB/VirD4 type IV secretion system of Bartonella is essential for establishing intraerythrocytic infection.

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0066584

21 January 2018

Role of ISAba1 and ISAba125 in governing the expression of blaADC in clinically relevant Acinetobacter baumannii strains resistant to cephalosporins

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0066584

21 January 2018

SNPsFinder--a web-based application for genome-wide discovery of single nucleotide polymorphisms in microbial genomes.

1 reference

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21 January 2018

High-throughput whole-genome sequencing to dissect the epidemiology of Acinetobacter baumannii isolates from a hospital outbreak

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https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0066584

21 January 2018

Impact of imipenem resistance on mortality in patients with Acinetobacter bacteraemia

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21 January 2018

Study of the correlation of imipenem resistance with efflux pumps AdeABC, AdeIJK, AdeDE and AbeM in clinical isolates of Acinetobacter baumannii

1 reference

https://pubmed.ncbi.nlm.nih.gov/23826102

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Factors affecting the isolation of CCC DNA from Streptomyces lividans and Escherichia coli

1 reference

https://pubmed.ncbi.nlm.nih.gov/23826102

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Cephalosporinase over-expression resulting from insertion of ISAba1 in Acinetobacter baumannii

1 reference

https://pubmed.ncbi.nlm.nih.gov/23826102

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The changing global epidemiology of Acinetobacter baumannii infections: a development with major public health implications

1 reference

https://pubmed.ncbi.nlm.nih.gov/23826102

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Dissemination of imipenem-resistant Acinetobacter baumannii strains carrying the ISAba1 blaOXA-23 genes in a Chinese hospital

1 reference

https://pubmed.ncbi.nlm.nih.gov/23826102

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Penicillin-binding protein 7/8 contributes to the survival of Acinetobacter baumannii in vitro and in vivo

1 reference

https://pubmed.ncbi.nlm.nih.gov/23826102

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Dissemination of multidrug-resistant Acinetobacter baumannii genotypes carrying bla(OXA-23) collected from hospitals in Rio de Janeiro, Brazil

1 reference

https://pubmed.ncbi.nlm.nih.gov/23826102

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1371/JOURNAL.PONE.0066584

1 reference

Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

2013PLoSO...866584Z

0 references

OpenCitations bibliographic resource ID

1 reference

Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

1 reference

Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

1 reference

Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

ResearchGate publication ID

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