(Q28651604)

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Performance of genetic programming optimised Bowtie2 on genome comparison and analytic testing (GCAT) benchmarks

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title

Performance of genetic programming optimised Bowtie2 on genome comparison and analytic testing (GCAT) benchmarks (English)

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main subject

computational mathematics

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author name string

W B Langdon

series ordinal

1

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language of work or name

English

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publication date

2015

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8

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issue

1

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page(s)

1

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copyright license

Creative Commons Attribution 4.0 International

start time

8 January 2015

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April 2022 Public Data File from Crossref

copyright status

copyrighted

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exact match

https://scigraph.springernature.com/pub.10.1186/s13040-014-0034-0

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cites work

Fast gapped-read alignment with Bowtie 2

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PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4304608

retrieved

17 March 2017

A map of human genome variation from population-scale sequencing

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4304608

retrieved

17 March 2017

Ultrafast and memory-efficient alignment of short DNA sequences to the human genome

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4304608

retrieved

17 March 2017

Gapped BLAST and PSI-BLAST: a new generation of protein database search programs

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stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4304608

retrieved

17 March 2017

Fast and accurate long-read alignment with Burrows-Wheeler transform

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stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4304608

retrieved

7 April 2017

Mycoplasma contamination in the 1000 Genomes Project

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stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4304608

retrieved

3 June 2018

ngs.plot: Quick mining and visualization of next-generation sequencing data by integrating genomic databases

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stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4304608

retrieved

3 June 2018

Integrating human sequence data sets provides a resource of benchmark SNP and indel genotype calls

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PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4304608

retrieved

3 June 2018

Next-generation DNA sequencing of paired-end tags (PET) for transcriptome and genome analyses

1 reference

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PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4304608

retrieved

3 June 2018

Next-generation sequencing transforms today's biology

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4304608

retrieved

3 June 2018

Why repetitive DNA is essential to genome function

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4304608

retrieved

3 June 2018

Identifiers

DOI

10.1186/S13040-014-0034-0

1 reference

stated in

Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

2495912

DBLP publication ID

journals/biodatamining/Langdon15

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stated in

DBLP Dataset 2021-01-02

retrieved

28 January 2021

Dimensions Publication ID

1043371184

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OpenCitations bibliographic resource ID

2495912

1 reference

stated in

Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

1 reference

Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

1 reference

Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

2495912

ResearchGate publication ID

271535514

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(Q28651604)

Performance of genetic programming optimised Bowtie2 on genome comparison and analytic testing (GCAT) benchmarks

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