(Q28659112)

2

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Yiling Lai

3

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Meichun Xiang

4

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Xiuna Wang

5

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Xinyu Zhang

6

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Xingzhong Liu

MAFFT Multiple Sequence Alignment Software Version 7: Improvements in Performance and Usability

7

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language of work or name

English

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publication date

8 February 2014

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published in

BMC Genomics

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volume

15

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issue

1

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page(s)

114

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cites work

1 reference

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The Paleozoic Origin of Enzymatic Lignin Decomposition Reconstructed from 31 Fungal Genomes

17 March 2017

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Origin and evolution of carnivorism in the Ascomycota (fungi)

17 March 2017

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Genome sequence of the insect pathogenic fungus Cordyceps militaris, a valued traditional Chinese medicine

17 March 2017

1 reference

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Finished genome of the fungal wheat pathogen Mycosphaerella graminicola reveals dispensome structure, chromosome plasticity, and stealth pathogenesis

17 March 2017

1 reference

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Genome sequencing and comparative transcriptomics of the model entomopathogenic fungi Metarhizium anisopliae and M. acridum

17 March 2017

1 reference

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Crystal structure of a glycoside hydrolase family 6 enzyme, CcCel6C, a cellulase constitutively produced by Coprinopsis cinerea

17 March 2017

1 reference

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SOAP2: an improved ultrafast tool for short read alignment

17 March 2017

1 reference

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The Carbohydrate-Active EnZymes database (CAZy): an expert resource for Glycogenomics

17 March 2017

1 reference

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Mapping and quantifying mammalian transcriptomes by RNA-Seq

17 March 2017

1 reference

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The genome sequence of the model ascomycete fungus Podospora anserina

17 March 2017

1 reference

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Automated eukaryotic gene structure annotation using EVidenceModeler and the Program to Assemble Spliced Alignments

17 March 2017

1 reference

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The Pfam protein families database

17 March 2017

1 reference

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Evolution of nematode-trapping cells of predatory fungi of the Orbiliaceae based on evidence from rRNA-encoding DNA and multiprotein sequences

17 March 2017

1 reference

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Genome sequencing and analysis of the versatile cell factory Aspergillus niger CBS 513.88

17 March 2017

1 reference

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Phytophthora Genome Sequences Uncover Evolutionary Origins and Mechanisms of Pathogenesis

17 March 2017

1 reference

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RAxML-VI-HPC: maximum likelihood-based phylogenetic analyses with thousands of taxa and mixed models

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3924618

TreeFam: a curated database of phylogenetic trees of animal gene families

17 March 2017

1 reference

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Novel G-protein-coupled receptor-like proteins in the plant pathogenic fungus Magnaporthe grisea

17 March 2017

1 reference

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Improved prediction of signal peptides: SignalP 3.0

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3924618

A cytosine methyltransferase homologue is essential for repeat-induced point mutation in Neurospora crassa

17 March 2017

1 reference

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Tandem repeats finder: a program to analyze DNA sequences

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3924618

Cloning, functional expression, and characterization of the human prostaglandin E2 receptor EP2 subtype

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3924618

The genetics of Caenorhabditis elegans

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3924618

Fungi evolved right on track

17 March 2017

1 reference

https://api.crossref.org/works/10.1186/1471-2164-15-114

Repbase Update, a database of eukaryotic repetitive elements

22 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3924618

Estimating absolute rates of molecular evolution and divergence times: a penalized likelihood approach

7 April 2017

2 references

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3924618

7 April 2017

https://api.crossref.org/works/10.1186%2F1471-2164-15-114

CAFE: a computational tool for the study of gene family evolution

22 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3924618

How carnivorous fungi use three-celled constricting rings to trap nematodes

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3924618

Genomic and proteomic analyses of the fungus Arthrobotrys oligospora provide insights into nematode-trap formation

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3924618

Comparative genomics yields insights into niche adaptation of plant vascular wilt pathogens

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3924618

Transcriptomic responses of the softwood-degrading white-rot fungus Phanerochaete carnosa during growth on coniferous and deciduous wood

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3924618

Carbohydrate-binding domains: multiplicity of biological roles.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3924618

Carnivorous fungi from Cretaceous amber

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3924618

Ectopically expressed leaf and bulb lectins from garlic (Allium sativum L.) protect transgenic tobacco plants against cotton leafworm (Spodoptera littoralis).

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3924618

Increased insect virulence in Beauveria bassiana strains overexpressing an engineered chitinase

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3924618

Binding characteristics of lectins involved in the trapping of nematodes by fungi

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3924618

Dialysis membrane technique for studying microbial interaction

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3924618

PILER: identification and classification of genomic repeats

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3924618

Processive endoglucanase active in crystalline cellulose hydrolysis by the brown rot basidiomycete Gloeophyllum trabeum

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3924618

RIP: the evolutionary cost of genome defense

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3924618

NEMATODE- TRAPPING FUNGI. AN INTRIGUING GROUP OF CARNIVOROUS PLANTS INHABIT THE MICROBIAL WORLD.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3924618

Prospects for controlling animal parasitic nematodes by predacious micro fungi

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3924618

Two cellobiohydrolase-encoding genes from Aspergillus niger require D-xylose and the xylanolytic transcriptional activator XlnR for their expression

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3924618

Lectins as cell recognition molecules

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3924618

Comparison of gene expression in trap cells and vegetative hyphae of the nematophagous fungus Monacrosporium haptotylum

3 June 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2164-15-114

Heterotrimeric G-protein and signal transduction in the nematode-trapping fungus Arthrobotrys dactyloides

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2164-15-114

RIPCAL: a tool for alignment-based analysis of repeat-induced point mutations in fungal genomic sequences

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2164-15-114

Adhesive and Mammalian Transglutaminase Substrate Properties of Candida albicans Hwp1

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2164-15-114

Three-dimensional structure of a thermostable native cellobiohydrolase, CBH IB, and molecular characterization of the cel7 gene from the filamentous fungus, Talaromyces emersonii

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2164-15-114

Microarray and real-time PCR analyses reveal mating type-dependent gene expression in a homothallic fungus.

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2164-15-114

PseudoPipe: an automated pseudogene identification pipeline

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2164-15-114

A novel function for the cellulose binding module of cellobiohydrolase I.

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3924618

Gene cloning of an endoglucanase from the basidiomycete Irpex lacteus and its cDNA expression in Saccharomyces cerevisiae

27 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3924618

Rhizosphere Interactions and the Exploitation of Microbial Agents for the Biological Control of Plant-Parasitic Nematodes

27 November 2018

1 reference

12 December 2020

Trap induction and trapping in eight nematode-trapping fungi (Orbiliaceae) as affected by juvenile stage of Caenorhabditis elegans

1 reference

12 December 2020

An adhesin of the yeast pathogen Candida glabrata mediating adherence to human epithelial cells

1 reference

12 December 2020

STIMULATED ACTIVITY OF NATURAL ENEMIES OF NEMATODES

1 reference

12 December 2020

Molecular phylogenetics of ascomycotal adhesins--a novel family of putative cell-surface adhesive proteins in fission yeasts

1 reference

12 December 2020

Identifiers

DOI

10.1186/1471-2164-15-114

1 reference

Dimensions Publication ID

1031585776

0 references

1 reference

1 reference

PubMed publication ID

24507587

1 reference