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Intrinsic immunity against retrotransposons by APOBEC cytidine deaminases
scientific article (publication date: 2013)
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title
Intrinsic immunity against retrotransposons by APOBEC cytidine deaminases
(English)
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main subject
retrotransposon
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author name string
Atsushi Koito
series ordinal
1
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Terumasa Ikeda
series ordinal
2
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language of work or name
English
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publication date
2013
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published in
Frontiers in Microbiology
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Crossref
volume
4
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page(s)
28
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cites work
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Human and rhesus APOBEC3D, APOBEC3F, APOBEC3G, and APOBEC3H demonstrate a conserved capacity to restrict Vif-deficient HIV-1
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Sole copy of Z2-type human cytidine deaminase APOBEC3H has inhibitory activity against retrotransposons and HIV-1
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Adaptive evolution and antiviral activity of the conserved mammalian cytidine deaminase APOBEC3H.
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Single-strand specificity of APOBEC3G accounts for minus-strand deamination of the HIV genome
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LINE-mediated retrotransposition of marked Alu sequences
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3 June 2018
APOBEC3 proteins inhibit LINE-1 retrotransposition in the absence of ORF1p binding
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3 June 2018
Defining APOBEC3 expression patterns in human tissues and hematopoietic cell subsets
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3 June 2018
Cellular microRNA and P bodies modulate host-HIV-1 interactions
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L1 retrotransposition occurs mainly in embryogenesis and creates somatic mosaicism
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3 June 2018
Suppression of HIV-1 replication by microRNA effectors
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3 June 2018
AID can restrict L1 retrotransposition suggesting a dual role in innate and adaptive immunity
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3 June 2018
Enhanced replication and pathogenesis of Moloney murine leukemia virus in mice defective in the murine APOBEC3 gene.
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3 June 2018
The artiodactyl APOBEC3 innate immune repertoire shows evidence for a multi-functional domain organization that existed in the ancestor of placental mammals
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3 June 2018
Murine APOBEC1 is a powerful mutator of retroviral and cellular RNA in vitro and in vivo
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3 June 2018
The antiretroviral potency of APOBEC1 deaminase from small animal species
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3 June 2018
LINE-like retrotransposition in Saccharomyces cerevisiae
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3 June 2018
Mouse APOBEC3 restricts friend leukemia virus infection and pathogenesis in vivo
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3 June 2018
Restriction by APOBEC3 proteins of endogenous retroviruses with an extracellular life cycle: ex vivo effects and in vivo "traces" on the murine IAPE and human HERV-K elements
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Effects of retroviruses on host genome function.
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The take and give between retrotransposable elements and their hosts
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3 June 2018
The incorporation of APOBEC3 proteins into murine leukemia viruses
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3 June 2018
Conserved footprints of APOBEC3G on Hypermutated human immunodeficiency virus type 1 and human endogenous retrovirus HERV-K(HML2) sequences
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3 June 2018
Single-stranded RNA facilitates nucleocapsid: APOBEC3G complex formation
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3 June 2018
Interactions of murine APOBEC3 and human APOBEC3G with murine leukemia viruses
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3 June 2018
P bodies, stress granules, and viral life cycles
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3 June 2018
The APOBEC3 cytidine deaminases: an innate defensive network opposing exogenous retroviruses and endogenous retroelements
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3 June 2018
The DNA deaminase activity of human APOBEC3G is required for Ty1, MusD, and human immunodeficiency virus type 1 restriction
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3 June 2018
Species-specific restriction of apobec3-mediated hypermutation
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3 June 2018
Derepression of microRNA-mediated protein translation inhibition by apolipoprotein B mRNA-editing enzyme catalytic polypeptide-like 3G (APOBEC3G) and its family members
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3 June 2018
Differential inhibition of long interspersed element 1 by APOBEC3 does not correlate with high-molecular-mass-complex formation or P-body association
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3 June 2018
APOBEC-mediated viral restriction: not simply editing?
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APOBEC3 inhibits mouse mammary tumour virus replication in vivo.
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3 June 2018
Antiviral protein APOBEC3G localizes to ribonucleoprotein complexes found in P bodies and stress granules
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3 June 2018
Selective inhibition of Alu retrotransposition by APOBEC3G.
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3 June 2018
L1 retrotransposition is suppressed by endogenously encoded small interfering RNAs in human cultured cells
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3576619
retrieved
3 June 2018
Murine retrovirus escapes from murine APOBEC3 via two distinct novel mechanisms.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3576619
retrieved
3 June 2018
The anti-HIV-1 editing enzyme APOBEC3G binds HIV-1 RNA and messenger RNAs that shuttle between polysomes and stress granules
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3576619
retrieved
3 June 2018
Cis-preferential LINE-1 reverse transcriptase activity in ribonucleoprotein particles
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3576619
retrieved
3 June 2018
Cellular inhibitors of long interspersed element 1 and Alu retrotransposition.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3576619
retrieved
3 June 2018
Human endogenous retroviruses in the primate lineage and their influence on host genomes
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3576619
retrieved
3 June 2018
Mice deficient in APOBEC2 and APOBEC3.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3576619
retrieved
3 June 2018
APOBEC3G cytidine deaminase inhibits retrotransposition of endogenous retroviruses.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3576619
retrieved
3 June 2018
An active murine transposon family pair: retrotransposition of "master" MusD copies and ETn trans-mobilization
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3576619
retrieved
3 June 2018
APOBEC-mediated editing of viral RNA.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3576619
retrieved
3 June 2018
Transcriptional disruption by the L1 retrotransposon and implications for mammalian transcriptomes
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3576619
retrieved
3 June 2018
L1 (LINE-1) retrotransposon diversity differs dramatically between mammals and fish.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3576619
retrieved
3 June 2018
Structure and expression of mobile ETnII retroelements and their coding-competent MusD relatives in the mouse
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3576619
retrieved
3 June 2018
High-affinity, non-sequence-specific RNA binding by the open reading frame 1 (ORF1) protein from long interspersed nuclear element 1 (LINE-1).
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3576619
retrieved
3 June 2018
Identification and characterization of novel human endogenous retrovirus families by phylogenetic screening of the human genome mapping project database
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3576619
retrieved
3 June 2018
Molecular investigations implicate human endogenous retroviruses as mediators of anti-retroviral antibodies in autoimmune rheumatic disease
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3576619
retrieved
3 June 2018
The age and evolution of non-LTR retrotransposable elements
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3576619
retrieved
3 June 2018
Potential Alu function: regulation of the activity of double-stranded RNA-activated kinase PKR.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3576619
retrieved
3 June 2018
Germ line-specific expression of intracisternal A-particle retrotransposons in transgenic mice
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3576619
retrieved
3 June 2018
Apolipoprotein B mRNA editing in 12 different mammalian species: hepatic expression is reflected in low concentrations of apoB-containing plasma lipoproteins
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3576619
retrieved
3 June 2018
Retrotransposition of a mouse IAP sequence tagged with an indicator gene
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3576619
retrieved
3 June 2018
Detection of a human intracisternal A-type retroviral particle antigenically related to HIV.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3576619
retrieved
3 June 2018
Detection of a human intracisternal retroviral particle associated with CD4+ T-cell deficiency
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3576619
retrieved
3 June 2018
Virus-like particles of the Ty3 retrotransposon assemble in association with P-body components
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3576619
retrieved
27 November 2018
LINE-1 retrotransposition requires the nucleic acid chaperone activity of the ORF1 protein
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3576619
retrieved
27 November 2018
Rapid evolution of primate antiviral enzyme APOBEC3G.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3576619
retrieved
27 November 2018
Identification of autonomous IAP LTR retrotransposons mobile in mammalian cells.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3576619
retrieved
27 November 2018
A potential role for the nucleolus in L1 retrotransposition
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3576619
retrieved
27 November 2018
Status of HERV in human cells: expression and coding capacity of human proviruses.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3576619
retrieved
27 November 2018
Identifiers
DOI
10.3389/FMICB.2013.00028
1 reference
stated in
Consolidated OpenCitations Corpus – April 2017
OpenCitations bibliographic resource ID
3559942
OpenCitations bibliographic resource ID
3559942
1 reference
stated in
Consolidated OpenCitations Corpus – April 2017
OpenCitations bibliographic resource ID
3559942
PMCID
3576619
1 reference
stated in
Consolidated OpenCitations Corpus – April 2017
OpenCitations bibliographic resource ID
3559942
PubMed ID
23431045
1 reference
stated in
Consolidated OpenCitations Corpus – April 2017
OpenCitations bibliographic resource ID
3559942
ResearchGate publication ID
235691597
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