(Q28740501)

1

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William Benjamin

2

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Mengtian Sun

3

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Karthik Ramani

Creative Commons Attribution 4.0 International

4

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language of work or name

English

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publication date

3 May 2011

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published in

PLOS One

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volume

6

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issue

5

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page(s)

e19349

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copyright license

start time

3 May 2011

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

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cites work

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Global landscape of protein complexes in the yeast Saccharomyces cerevisiae

17 March 2017

1 reference

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A human protein-protein interaction network: a resource for annotating the proteome

17 March 2017

1 reference

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A protein interaction map of Drosophila melanogaster

17 March 2017

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Transcriptional regulatory networks in Saccharomyces cerevisiae

17 March 2017

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An efficient algorithm for large-scale detection of protein families

17 March 2017

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SH2 domains, interaction modules and cellular wiring

17 March 2017

1 reference

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A comprehensive analysis of protein-protein interactions in Saccharomyces cerevisiae

17 March 2017

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Toward a protein-protein interaction map of the budding yeast: A comprehensive system to examine two-hybrid interactions in all possible combinations between the yeast proteins

17 March 2017

1 reference

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Knowledge-based analysis of microarray gene expression data by using support vector machines

17 March 2017

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Missing and spurious interactions and the reconstruction of complex networks

17 March 2017

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A Bayesian Networks Approach for Predicting Protein-Protein Interactions from Genomic Data

23 March 2017

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Comparative assessment of large-scale data sets of protein-protein interactions

7 April 2017

1 reference

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Toward a comprehensive atlas of the physical interactome of Saccharomyces cerevisiae

7 April 2017

1 reference

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Hierarchical structure and the prediction of missing links in networks

7 April 2017

1 reference

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Estimating view parameters from random projections for Tomography using spherical MDS.

9 May 2017

1 reference

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IDSS: deformation invariant signatures for molecular shape comparison

3 June 2018

1 reference

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Three dimensional shape comparison of flexible proteins using the local-diameter descriptor

3 June 2018

1 reference

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Uncovering the rules for protein-protein interactions from yeast genomic data

3 June 2018

1 reference

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A remark on global positioning from local distances

3 June 2018

1 reference

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Defining functional distance using manifold embeddings of gene ontology annotations

3 June 2018

1 reference

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Understanding network concepts in modules

3 June 2018

1 reference

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Data fusion and multicue data matching by diffusion maps

3 June 2018

1 reference

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Diffusion maps and coarse-graining: A unified framework for dimensionality reduction, graph partitioning, and data set parameterization

3 June 2018

1 reference

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Exploiting indirect neighbours and topological weight to predict protein function from protein-protein interactions

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3086913

A data integration methodology for systems biology

3 June 2018

1 reference

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Assessing the limits of genomic data integration for predicting protein networks

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3086913

Geometric diffusions as a tool for harmonic analysis and structure definition of data: diffusion maps.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3086913

Geometric diffusions as a tool for harmonic analysis and structure definition of data: multiscale methods

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3086913

Inferring cellular networks using probabilistic graphical models

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3086913

Analyzing yeast protein-protein interaction data obtained from different sources

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3086913

Interaction generality, a measurement to assess the reliability of a protein-protein interaction

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3086913

Nonlinear dimensionality reduction by locally linear embedding

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3086913

Modeling interactome: scale-free or geometric?

3 June 2018

1 reference

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Fitting a geometric graph to a protein-protein interaction network

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0019349

Predicting interactions in protein networks by completing defective cliques.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0019349

A global geometric framework for nonlinear dimensionality reduction

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0019349

Bridging structural biology and genomics: assessing protein interaction data with known complexes

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0019349

Effect of sampling on topology predictions of protein-protein interaction networks

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0019349