(Q28740970)

22 June 2017

title

Performance, accuracy, and Web server for evolutionary placement of short sequence reads under maximum likelihood (English)

1 reference

22 June 2017

1 reference

Alexandros Stamatakis

3

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author name string

Simon A Berger

1

1 reference

22 June 2017

Denis Krompass

2

1 reference

22 June 2017

Alexandros Stamatakis

3

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22 June 2017

language of work or name

English

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publication date

23 March 2011

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22 June 2017

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22 June 2017

volume

60

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22 June 2017

issue

3

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22 June 2017

page(s)

291-302

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phyloXML: XML for evolutionary biology and comparative genomics

22 June 2017

cites work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3078422

A core gut microbiome in obese and lean twins

17 March 2017

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A rapid bootstrap algorithm for the RAxML Web servers

17 March 2017

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Worlds within worlds: evolution of the vertebrate gut microbiota

17 March 2017

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17 March 2017

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17 March 2017

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RAxML-VI-HPC: maximum likelihood-based phylogenetic analyses with thousands of taxa and mixed models

17 March 2017

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Unexpected diversity and complexity of the Guerrero Negro hypersaline microbial mat

17 March 2017

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Obesity alters gut microbial ecology

17 March 2017

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MAFFT version 5: improvement in accuracy of multiple sequence alignment

17 March 2017

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MUSCLE: multiple sequence alignment with high accuracy and high throughput

17 March 2017

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Pyrosequencing sheds light on DNA sequencing

17 March 2017

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Profile hidden Markov models

17 March 2017

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Gapped BLAST and PSI-BLAST: a new generation of protein database search programs

17 March 2017

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Evolutionary trees from DNA sequences: A maximum likelihood approach

17 March 2017

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UniFrac: a new phylogenetic method for comparing microbial communities

17 March 2017

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RAxML-III: a fast program for maximum likelihood-based inference of large phylogenetic trees

7 April 2017

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ARB: a software environment for sequence data

7 April 2017

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NAST: a multiple sequence alignment server for comparative analysis of 16S rRNA genes

7 April 2017

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Quantitative Phylogenetic Assessment of Microbial Communities in Diverse Environments

7 April 2017

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pplacer: linear time maximum-likelihood and Bayesian phylogenetic placement of sequences onto a fixed reference tree

9 May 2017

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The influence of sex, handedness, and washing on the diversity of hand surface bacteria

3 June 2018

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A detailed analysis of 16S ribosomal RNA gene segments for the diagnosis of pathogenic bacteria

3 June 2018

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Accurate phylogenetic classification of variable-length DNA fragments

3 June 2018

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3 June 2018

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3 June 2018

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Inferring pattern and process: maximum-likelihood implementation of a nonhomogeneous model of DNA sequence evolution for phylogenetic analysis.

3 June 2018

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Matched-pairs tests of homogeneity with applications to homologous nucleotide sequences.

3 June 2018

1 reference

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Phymm and PhymmBL: metagenomic phylogenetic classification with interpolated Markov models

21 January 2018

1 reference

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Methanogenic communities in permafrost-affected soils of the Laptev Sea coast, Siberian Arctic, characterized by 16S rRNA gene fingerprints.

21 January 2018

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An Empirical Test of Bootstrapping as a Method for Assessing Confidence in Phylogenetic Analysis

21 January 2018

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Quantitative Phyletics and the Evolution of Anurans

21 January 2018

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The closest BLAST hit is often not the nearest neighbor.

21 January 2018

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Statistical assignment of DNA sequences using Bayesian phylogenetics

21 January 2018

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Inferring confidence sets of possibly misspecified gene trees.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FSYSBIO%2FSYR010

Estimation of Phylogeny and Invariant Sites under the General Markov Model of Nucleotide Sequence Evolution

21 January 2018

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The Biasing Effect of Compositional Heterogeneity on Phylogenetic Estimates May be Underestimated

21 January 2018

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Confidence Limits on Phylogenies: an Approach using the Bootstrap

21 January 2018

1 reference

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27 November 2018

Identifiers

DOI

10.1093/SYSBIO/SYR010

1 reference

OpenCitations bibliographic resource ID

22 June 2017

929782

1 reference

Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

1 reference

Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

929782

1 reference