(Q28749848)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19561086%20AND%20SRC:MED&resulttype=core&format=json

1 February 2020

title

The small terminase, gp16, of bacteriophage T4 is a regulator of the DNA packaging motor (English)

1 reference

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1 February 2020

0 references

1 reference

6

1 reference

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1 February 2020

author name string

Abdulrahman S Al-Zahrani

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19561086%20AND%20SRC:MED&resulttype=core&format=json

1 February 2020

Kiran Kondabagil

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19561086%20AND%20SRC:MED&resulttype=core&format=json

1 February 2020

Song Gao

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19561086%20AND%20SRC:MED&resulttype=core&format=json

1 February 2020

Noreen Kelly

4

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19561086%20AND%20SRC:MED&resulttype=core&format=json

1 February 2020

Manjira Ghosh-Kumar

5

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19561086%20AND%20SRC:MED&resulttype=core&format=json

1 February 2020

language of work or name

English

0 references

publication date

26 June 2009

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19561086%20AND%20SRC:MED&resulttype=core&format=json

Journal of Biological Chemistry

1 February 2020

published in

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19561086%20AND%20SRC:MED&resulttype=core&format=json

1 February 2020

volume

284

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19561086%20AND%20SRC:MED&resulttype=core&format=json

1 February 2020

issue

36

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19561086%20AND%20SRC:MED&resulttype=core&format=json

1 February 2020

page(s)

24490-24500

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19561086%20AND%20SRC:MED&resulttype=core&format=json

The structure of the phage T4 DNA packaging motor suggests a mechanism dependent on electrostatic forces

1 February 2020

cites work

1 reference

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GEFs and GAPs: critical elements in the control of small G proteins

16 March 2017

1 reference

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The structure of the ATPase that powers DNA packaging into bacteriophage T4 procapsids

16 March 2017

1 reference

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UvrD helicase unwinds DNA one base pair at a time by a two-part power stroke

16 March 2017

1 reference

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Prediction and Functional Analysis of Native Disorder in Proteins from the Three Kingdoms of Life

16 March 2017

1 reference

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The bacteriophage straight phi29 portal motor can package DNA against a large internal force

16 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2782041

Structure of bovine mitochondrial F(1)-ATPase with nucleotide bound to all three catalytic sites: implications for the mechanism of rotary catalysis

16 March 2017

1 reference

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Structure of the bacteriophage phi29 DNA packaging motor

16 March 2017

1 reference

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Structure at 1.65 A of RhoA and its GTPase-activating protein in complex with a transition-state analogue

16 March 2017

1 reference

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The Ras-RasGAP complex: structural basis for GTPase activation and its loss in oncogenic Ras mutants

16 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2782041

Crystal structure of the nucleotide exchange factor GrpE bound to the ATPase domain of the molecular chaperone DnaK

16 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2782041

Use of T7 RNA polymerase to direct expression of cloned genes

16 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2782041

Engineering hybrid genes without the use of restriction enzymes: gene splicing by overlap extension

16 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2782041

A structural change in the kinesin motor protein that drives motility

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2782041

Intersubunit coordination in a homomeric ring ATPase

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2782041

Assembly architecture and DNA binding of the bacteriophage P22 terminase small subunit

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2782041

Comparative genomics and evolutionary trajectories of viral ATP dependent DNA-packaging systems

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2782041

The bacteriophage DNA packaging motor

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2782041

Single phage T4 DNA packaging motors exhibit large force generation, high velocity, and dynamic variability.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2782041

Chromosome structure in phage t4, iii. Terminal redundancy and length determination

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2782041

Comparative genomics and evolution of the tailed-bacteriophages.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2782041

The functional domains of bacteriophage t4 terminase.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2782041

Molecular architecture of the prolate head of bacteriophage T4.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2782041

Defining the bacteriophage T4 DNA packaging machine: evidence for a C-terminal DNA cleavage domain in the large terminase/packaging protein gp17.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2782041

Defining the ATPase center of bacteriophage T4 DNA packaging machine: requirement for a catalytic glutamate residue in the large terminase protein gp17.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2782041

Characterization and prediction of linker sequences of multi-domain proteins by a neural network.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2782041

Sequence analysis of bacteriophage T4 DNA packaging/terminase genes 16 and 17 reveals a common ATPase center in the large subunit of viral terminases

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2782041

The N-terminal ATPase site in the large terminase protein gp17 is critically required for DNA packaging in bacteriophage T4.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2782041

Monitoring the GAP catalyzed H-Ras GTPase reaction at atomic resolution in real time

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2782041

Virus DNA packaging: the strategy used by phage lambda

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2782041

Bacteriophage T4 head morphogenesis. IV. Comparison of gene 16-, 17-, and 49-defective head structures

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2782041

DNA packaging in dsDNA bacteriophages

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2782041

Bacteriophage P1 genes involved in the recognition and cleavage of the phage packaging site (pac)

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2782041

Enzymatic breakage of the cohesive end site of phage lambda DNA: terminase (ter) reaction

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2782041

Cloning, overexpression and purification of the terminase proteins gp16 and gp17 of bacteriophage T4. Construction of a defined in-vitro DNA packaging system using purified terminase proteins.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2782041

Functional analysis of the bacteriophage T4 DNA-packaging ATPase motor

20 June 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M109.025007

Bacillus subtilis bacteriophage SPP1 DNA packaging motor requires terminase and portal proteins

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M109.025007

Mechanism of elongation factor (EF)-Ts-catalyzed nucleotide exchange in EF-Tu. Contribution of contacts at the guanine base

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M109.025007

A built-in arginine finger triggers the self-stimulatory GTPase-activating activity of rho family GTPases.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M109.025007

Isolation and characterization of T4 bacteriophage gp17 terminase, a large subunit multimer with enhanced ATPase activity

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M109.025007

The headful packaging nuclease of bacteriophage T4.

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2782041

Mutations affecting the high affinity ATPase center of gpA, the large subunit of bacteriophage lambda terminase, inactivate the endonuclease activity of terminase

27 November 2018

1 reference

12 December 2020

The DNA translocating ATPase of bacteriophage T4 packaging motor

1 reference

12 December 2020

Biochemical characterization of an ATPase activity associated with the large packaging subunit gp17 from bacteriophage T4

1 reference

12 December 2020

An ATP hydrolysis sensor in the DNA packaging motor from bacteriophage T4 suggests an inchworm-type translocation mechanism

1 reference

12 December 2020

DNA requirements in vivo for phage T4 packaging

1 reference

12 December 2020

Mechanistic coupling of bacteriophage T4 DNA packaging to components of the replication-dependent late transcription machinery

1 reference

12 December 2020

A critical coiled coil motif in the small terminase, gp16, from bacteriophage T4: insights into DNA packaging initiation and assembly of packaging motor

1 reference

12 December 2020

Domain structure of gpNu1, a phage lambda DNA packaging protein

1 reference

12 December 2020

Functional analysis of the DNA-packaging/terminase protein gp17 from bacteriophage T4

1 reference

12 December 2020

DNA packaging in the lambdoid phages: The role of λ genes Nu1 and A

1 reference

12 December 2020

Purification and characterization of the small subunit of phage T4 terminase, gp16, required for DNA packaging

1 reference

12 December 2020

Identifiers

DOI

10.1074/JBC.M109.025007

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19561086%20AND%20SRC:MED&resulttype=core&format=json

release_r5bd2nmaqzfirpk7x7t6usxlla

1 February 2020

Fatcat ID

1 reference

Fatcat

https://api.fatcat.wiki/v0/release/r5bd2nmaqzfirpk7x7t6usxlla

24 November 2022

mapped directly with Wikidata item

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19561086%20AND%20SRC:MED&resulttype=core&format=json

1 February 2020

PubMed publication ID

19561086

1 reference