(Q28755269)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19190180%20AND%20SRC:MED&resulttype=core&format=json

20 January 2020

title

Tri-split tRNA is a transfer RNA made from 3 transcripts that provides insight into the evolution of fragmented tRNAs in archaea (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19190180%20AND%20SRC:MED&resulttype=core&format=json

20 January 2020

0 references

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19190180%20AND%20SRC:MED&resulttype=core&format=json

20 January 2020

Akio Kanai

7

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19190180%20AND%20SRC:MED&resulttype=core&format=json

20 January 2020

author name string

Junichi Sugahara

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19190180%20AND%20SRC:MED&resulttype=core&format=json

20 January 2020

Kaoru Kikuta

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19190180%20AND%20SRC:MED&resulttype=core&format=json

20 January 2020

Reiko Hirano

4

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19190180%20AND%20SRC:MED&resulttype=core&format=json

20 January 2020

Asako Sato

5

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19190180%20AND%20SRC:MED&resulttype=core&format=json

20 January 2020

Masaru Tomita

6

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19190180%20AND%20SRC:MED&resulttype=core&format=json

20 January 2020

language of work or name

English

0 references

publication date

3 February 2009

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19190180%20AND%20SRC:MED&resulttype=core&format=json

20 January 2020

number of pages

5

1 reference

Proceedings of the National Academy of Sciences of the United States of America

inferred from page(s)

published in

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19190180%20AND%20SRC:MED&resulttype=core&format=json

20 January 2020

volume

106

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19190180%20AND%20SRC:MED&resulttype=core&format=json

20 January 2020

issue

8

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19190180%20AND%20SRC:MED&resulttype=core&format=json

20 January 2020

page(s)

2683-2687

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19190180%20AND%20SRC:MED&resulttype=core&format=json

20 January 2020

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2650326

Sequence evidence in the archaeal genomes that tRNAs emerged through the combination of ancestral genes as 5' and 3' tRNA halves

16 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2650326

Genomic analysis of the uncultivated marine crenarchaeote Cenarchaeum symbiosum

16 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2650326

The UCSC Archaeal Genome Browser

16 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2650326

WebLogo: A Sequence Logo Generator

16 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2650326

ARAGORN, a program to detect tRNA genes and tmRNA genes in nucleotide sequences

16 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2650326

The genome of Nanoarchaeum equitans: insights into early archaeal evolution and derived parasitism

16 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2650326

tRNomics: analysis of tRNA genes from 50 genomes of Eukarya, Archaea, and Bacteria reveals anticodon-sparing strategies and domain-specific features

16 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2650326

Caldivirga maquilingensis gen. nov., sp. nov., a new genus of rod-shaped crenarchaeote isolated from a hot spring in the Philippines

16 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2650326

tRNAscan-SE: a program for improved detection of transfer RNA genes in genomic sequence

16 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2650326

Phylogeny from function: evidence from the molecular fossil record that tRNA originated in replication, not translation

16 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2650326

Transfer RNA genes in pieces are an ancestral character

16 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2650326

Transfer RNA genes in pieces

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2650326

In silico screening of archaeal tRNA-encoding genes having multiple introns with bulge-helix-bulge splicing motifs

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2650326

SPLITS: a new program for predicting split and intron-containing tRNA genes at the genome level.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2650326

The heteromeric Nanoarchaeum equitans splicing endonuclease cleaves noncanonical bulge-helix-bulge motifs of joined tRNA halves.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2650326

Coevolution of tRNA intron motifs and tRNA endonuclease architecture in Archaea

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2650326

Evolutionary and functional genomics of the Archaea

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2650326

Structure, function, and evolution of the tRNA endonucleases of Archaea: an example of subfunctionalization

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2650326

New evidence for the genomic tag hypothesis: archaeal CCA-adding enzymes and tDNA substrates

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2650326

An operational RNA code for amino acids and possible relationship to genetic code

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2650326

tRNAs as primer of reverse transcriptases

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2650326

On the origin of the transfer RNA molecule

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2650326

Nanoarchaeum equitans creates functional tRNAs from separate genes for their 5'- and 3'-halves.

3 June 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0808246106

Permuted tRNA genes expressed via a circular RNA intermediate in Cyanidioschyzon merolae.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0808246106

Comprehensive analysis of archaeal tRNA genes reveals rapid increase of tRNA introns in the order thermoproteales

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0808246106

The non-monophyletic origin of the tRNA molecule and the origin of genes only after the evolutionary stage of the last universal common ancestor (LUCA).

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0808246106

Molecular evolution of transfer RNA from two precursor hairpins: Implications for the origin of protein synthesis

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/19190180

12 December 2020

inferred from PubMed ID database lookup

Divergent transcriptional and translational signals in Archaea

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/19190180

12 December 2020

inferred from PubMed ID database lookup

RNA ligation and the origin of tRNA

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/19190180

12 December 2020

inferred from PubMed ID database lookup

Identifiers

DOI

10.1073/PNAS.0808246106

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19190180%20AND%20SRC:MED&resulttype=core&format=json

20 January 2020

0 references

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19190180%20AND%20SRC:MED&resulttype=core&format=json

20 January 2020

PubMed publication ID

19190180

1 reference