(Q29547300)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17446895%20AND%20SRC:MED&resulttype=core&format=json

29 December 2019

title

Locating proteins in the cell using TargetP, SignalP and related tools (English)

2 references

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/esummary.fcgi?db=pubmed&retmode=json&id=17446895

23 April 2017

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17446895%20AND%20SRC:MED&resulttype=core&format=json

29 December 2019

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17446895%20AND%20SRC:MED&resulttype=core&format=json

29 December 2019

Gunnar von Heijne

series ordinal

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17446895%20AND%20SRC:MED&resulttype=core&format=json

29 December 2019

Henrik Nielsen

series ordinal

4

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17446895%20AND%20SRC:MED&resulttype=core&format=json

29 December 2019

author name string

Olof Emanuelsson

series ordinal

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17446895%20AND%20SRC:MED&resulttype=core&format=json

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/esummary.fcgi?db=pubmed&retmode=json&id=17446895

29 December 2019

language of work or name

1 reference

23 April 2017

publication date

1 January 2007

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17446895%20AND%20SRC:MED&resulttype=core&format=json

29 December 2019

2 references

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/esummary.fcgi?db=pubmed&retmode=json&id=17446895

23 April 2017

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17446895%20AND%20SRC:MED&resulttype=core&format=json

29 December 2019

volume

2

2 references

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/esummary.fcgi?db=pubmed&retmode=json&id=17446895

23 April 2017

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17446895%20AND%20SRC:MED&resulttype=core&format=json

29 December 2019

issue

4

2 references

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/esummary.fcgi?db=pubmed&retmode=json&id=17446895

23 April 2017

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17446895%20AND%20SRC:MED&resulttype=core&format=json

29 December 2019

page(s)

953-971

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17446895%20AND%20SRC:MED&resulttype=core&format=json

Large-scale analysis of gene expression, protein localization, and gene disruption in Saccharomyces cerevisiae

29 December 2019

cites work

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2007.131

Green fluorescent protein as a marker for gene expression

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2007.131

Identification of fission yeast nuclear markers using random polypeptide fusions with green fluorescent protein

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2007.131

Subcellular localization of the yeast proteome

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2007.131

Systematic subcellular localization of novel proteins identified by large-scale cDNA sequencing.

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2007.131

Linking genome and proteome by mass spectrometry: large-scale identification of yeast proteins from two dimensional gels

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2007.131

Proteomics of the chloroplast: systematic identification and targeting analysis of lumenal and peripheral thylakoid proteins

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2007.131

Proteomics of organelles and large cellular structures

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2007.131

Directed proteomic analysis of the human nucleolus

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2007.131

Proteomic characterization of the human centrosome by protein correlation profiling

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2007.131

A mammalian organelle map by protein correlation profiling

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2007.131

Nucleolar proteome dynamics

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2007.131

Affinity proteomics for systematic protein profiling of chromosome 21 gene products in human tissues

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2007.131

A human protein atlas for normal and cancer tissues based on antibody proteomics

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2007.131

A wiring of the human nucleolus.

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2007.131

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2007.131

Recent progress and future directions in studies of the main terminal branch of the general secretory pathway in Gram-negative bacteria--a review.

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2007.131

Intracellular sorting and transport of proteins

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2007.131

Feature-based prediction of non-classical and leaderless protein secretion

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2007.131

Genome Update: Protein secretion systems in 225 bacterial genomes

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2007.131

Type V protein secretion pathway: the autotransporter story

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2007.131

Process of protein transport by the type III secretion system

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2007.131

Non-classical protein secretion in bacteria

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2007.131

Common principles of protein translocation across membranes

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2007.131

Domain structure of mitochondrial and chloroplast targeting peptides

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2007.131

ChloroP, a neural network-based method for predicting chloroplast transit peptides and their cleavage sites

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2007.131

Chloroplast transit peptides: structure, function and evolution

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2007.131

Chapter 10 Analysis and prediction of mitochondrial targeting peptides

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2007.131

Feature-extraction from endopeptidase cleavage sites in mitochondrial targeting peptides

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2007.131

Two mitochondrial matrix proteases act sequentially in the processing of mammalian matrix enzymes

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2007.131

Structural basis of presequence recognition by the mitochondrial protein import receptor Tom20

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2007.131

Crystal structures of mitochondrial processing peptidase reveal the mode for specific cleavage of import signal sequences

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2007.131

On the prokaryotic nature of red algal chloroplasts

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2007.131

The origin of red algae and the evolution of chloroplasts

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2007.131

Multiple pathways for the targeting of thylakoid proteins in chloroplasts

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2007.131

Protein targeting by the twin-arginine translocation pathway

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2007.131

Dual targeting properties of the N-terminal signal sequence of Arabidopsis thaliana THI1 protein to mitochondria and chloroplasts.

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2007.131

Two birds with one stone: genes that encode products targeted to two or more compartments

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2007.131

Interaction of plant mitochondrial and chloroplast signal peptides with the Hsp70 molecular chaperone

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2007.131

The Arabidopsis thaliana chloroplast proteome reveals pathway abundance and novel protein functions.

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2007.131

Evidence for a protein transported through the secretory pathway en route to the higher plant chloroplast.

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2007.131

A Bayesian system integrating expression data with sequence patterns for localizing proteins: comprehensive application to the yeast genome

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2007.131

Localizing proteins in the cell from their phylogenetic profiles.

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2007.131

Inferring sub-cellular localization through automated lexical analysis

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2007.131

Hum-PLoc: a novel ensemble classifier for predicting human protein subcellular localization

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2007.131

Predicting eukaryotic protein subcellular location by fusing optimized evidence-theoretic K-Nearest Neighbor classifiers

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2007.131

Large-scale plant protein subcellular location prediction

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2007.131

Predicting protein cellular localization using a domain projection method

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2007.131

Predicting subcellular localization via protein motif co-occurrence

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2007.131

Sequence conserved for subcellular localization

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2007.131

BLAST: at the core of a powerful and diverse set of sequence analysis tools

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2007.131

Prediction of protein subcellular localization

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2007.131

A new method for predicting signal sequence cleavage sites

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2007.131

A knowledge base for predicting protein localization sites in eukaryotic cells

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2007.131

Identification of prokaryotic and eukaryotic signal peptides and prediction of their cleavage sites

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2007.131

Improved prediction of signal peptides: SignalP 3.0

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2007.131

Computational method to predict mitochondrially imported proteins and their targeting sequences

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2007.131

Predicting subcellular localization of proteins based on their N-terminal amino acid sequence

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2007.131

Adaptation of protein surfaces to subcellular location

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2007.131

Discrimination of intracellular and extracellular proteins using amino acid composition and residue-pair frequencies.

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2007.131

Using neural networks for prediction of the subcellular location of proteins

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2007.131

Relation between amino acid composition and cellular location of proteins.

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2007.131

Using discriminant function for prediction of subcellular location of prokaryotic proteins

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2007.131

Protein subcellular location prediction

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2007.131

Support vector machine approach for protein subcellular localization prediction

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2007.131

Prediction of protein subcellular locations by support vector machines using compositions of amino acids and amino acid pairs

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2007.131

ESLpred: SVM-based method for subcellular localization of eukaryotic proteins using dipeptide composition and PSI-BLAST.

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2007.131

Prediction of protein cellular attributes using pseudo-amino acid composition

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2007.131

Esub8: a novel tool to predict protein subcellular localizations in eukaryotic organisms

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2007.131

BaCelLo: a balanced subcellular localization predictor

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2007.131

Protein disorder prediction: implications for structural proteomics

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2007.131

Expert system for predicting protein localization sites in gram-negative bacteria

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2007.131

The Universal Protein Resource (UniProt)

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2007.131

Selection of representative protein data sets

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2007.131

LOCSVMPSI: a web server for subcellular localization of eukaryotic proteins using SVM and profile of PSI-BLAST

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2007.131

Transcending the impenetrable: how proteins come to terms with membranes

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2007.131

Central functions of the lumenal and peripheral thylakoid proteome of Arabidopsis determined by experimentation and genome-wide prediction

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2007.131

A common export pathway for proteins binding complex redox cofactors?

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2007.131

Competition between Sec- and TAT-dependent protein translocation in Escherichia coli

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2007.131

Prediction of twin-arginine signal peptides

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2007.131

Predicting transmembrane protein topology with a hidden Markov model: application to complete genomes

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2007.131

Evaluation of methods for the prediction of membrane spanning regions

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2007.131

Transmembrane helix predictions revisited

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2007.131

Transmembrane helix prediction: a comparative evaluation and analysis.

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2007.131

Recognition of transmembrane segments in proteins: review and consistency-based benchmarking of internet servers.

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2007.131

beta-Barrel membrane proteins

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2007.131

Prediction of the transmembrane regions of beta-barrel membrane proteins with a neural network-based predictor

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2007.131

A sequence-profile-based HMM for predicting and discriminating beta barrel membrane proteins

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2007.131

Prediction of lipid posttranslational modifications and localization signals from protein sequences: big-Pi, NMT and PTS1

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2007.131

N-Terminal myristoylation predictions by ensembles of neural networks

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2007.131

Prediction of lipoprotein signal peptides in Gram-negative bacteria

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2007.131

The structure of signal peptides from bacterial lipoproteins

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2007.131

Recent improvements to the PROSITE database

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2007.131

Prediction of Golgi Type II membrane proteins based on their transmembrane domains

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2007.131

Finding nuclear localization signals

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2007.131

Nuclear transport of adenovirus DNA polymerase is facilitated by interaction with preterminal protein

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2007.131

Mechanisms of Receptor-Mediated Nuclear Import and Nuclear Export

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2007.131

Analysis and prediction of leucine-rich nuclear export signals

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2007.131

Peroxisomal protein targeting and identification of peroxisomal targeting signals in cholesterol biosynthetic enzymes

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2007.131

In silico prediction of the peroxisomal proteome in fungi, plants and animals.

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2007.131

Prediction of peroxisomal targeting signal 1 containing proteins from amino acid sequence

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2007.131

Prediction of proprotein convertase cleavage sites

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2007.131

A combined transmembrane topology and signal peptide prediction method

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2007.131

Assessing the accuracy of prediction algorithms for classification: an overview

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2007.131

Predicting protein localization in budding yeast

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2007.131

PLPD: reliable protein localization prediction from imbalanced and overlapped datasets.

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2007.131

Evaluation and comparison of mammalian subcellular localization prediction methods

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2007.131

pTARGET: a web server for predicting protein subcellular localization

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2007.131

Machine learning approaches for the prediction of signal peptides and other protein sorting signals

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2007.131

A comparison of signal sequence prediction methods using a test set of signal peptides

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2007.131

Evaluating eukaryotic secreted protein prediction

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2007.131

PrediSi: prediction of signal peptides and their cleavage positions

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2007.131

PSORTb v.2.0: expanded prediction of bacterial protein subcellular localization and insights gained from comparative proteome analysis

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2007.131

Extensive feature detection of N-terminal protein sorting signals

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2007.131

Mimicking cellular sorting improves prediction of subcellular localization

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2007.131

Detecting and sorting targeting peptides with neural networks and support vector machines.

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2007.131

Exploiting the past and the future in protein secondary structure prediction

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2007.131

Predicting subcellular localization of proteins using machine-learned classifiers

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2007.131

MultiLoc: prediction of protein subcellular localization using N-terminal targeting sequences, sequence motifs and amino acid composition

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2007.131

31 March 2020

Identifiers

DOI

10.1038/NPROT.2007.131

3 references

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/esummary.fcgi?db=pubmed&retmode=json&id=17446895

23 April 2017

Consolidated OpenCitations Corpus – April 2017

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17446895%20AND%20SRC:MED&resulttype=core&format=json

Dimensions Publication ID

29 December 2019

1037402439

0 references

1 reference

Consolidated OpenCitations Corpus – April 2017

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/esummary.fcgi?db=pubmed&retmode=json&id=17446895

3 references

23 April 2017

Consolidated OpenCitations Corpus – April 2017