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Next-generation DNA sequencing
scientific article (publication date: October 2008)
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scholarly article
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title
Next-generation DNA sequencing
(English)
1 reference
stated in
PubMed
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/esummary.fcgi?db=pubmed&retmode=json&id=18846087
retrieved
23 April 2017
main subject
DNA sequencing
1 reference
based on heuristic
inferred from title
author name string
Shendure J
series ordinal
1
1 reference
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PubMed
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/esummary.fcgi?db=pubmed&retmode=json&id=18846087
retrieved
23 April 2017
Ji H
series ordinal
2
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PubMed
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/esummary.fcgi?db=pubmed&retmode=json&id=18846087
retrieved
23 April 2017
language of work or name
English
1 reference
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23 April 2017
publication date
October 2008
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retrieved
23 April 2017
published in
Nature Biotechnology
1 reference
stated in
PubMed
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/esummary.fcgi?db=pubmed&retmode=json&id=18846087
retrieved
23 April 2017
volume
26
1 reference
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PubMed
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retrieved
23 April 2017
page(s)
1135-45
1 reference
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PubMed
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/esummary.fcgi?db=pubmed&retmode=json&id=18846087
retrieved
23 April 2017
issue
10
1 reference
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PubMed
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/esummary.fcgi?db=pubmed&retmode=json&id=18846087
retrieved
23 April 2017
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Microfabricated bioprocessor for integrated nanoliter-scale Sanger DNA sequencing
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Progress toward ultrafast DNA sequencing using solid-state nanopores.
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Accurate multiplex polony sequencing of an evolved bacterial genome
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Genome sequencing in microfabricated high-density picolitre reactors
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In situ localized amplification and contact replication of many individual DNA molecules
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Fluorescent in situ sequencing on polymerase colonies
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Whole-genome re-sequencing
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7 January 2021
based on heuristic
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Single-molecule DNA sequencing of a viral genome
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7 January 2021
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Gene identification signature (GIS) analysis for transcriptome characterization and genome annotation
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7 January 2021
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Transforming single DNA molecules into fluorescent magnetic particles for detection and enumeration of genetic variations
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7 January 2021
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Solid phase DNA amplification: characterisation of primer attachment and amplification mechanisms
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7 January 2021
based on heuristic
inferred from DOI database lookup
BTA, a novel reagent for DNA attachment on glass and efficient generation of solid-phase amplified DNA colonies.
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7 January 2021
based on heuristic
inferred from DOI database lookup
A new class of cleavable fluorescent nucleotides: synthesis and optimization as reversible terminators for DNA sequencing by synthesis
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Gene expression analysis by massively parallel signature sequencing (MPSS) on microbead arrays
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Real-time DNA sequencing using detection of pyrophosphate release
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based on heuristic
inferred from DOI database lookup
Fidelity of DNA ligation: a novel experimental approach based on the polymerisation of libraries of oligonucleotides
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Magnetic assembly of high-density DNA arrays for genomic analyses
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7 January 2021
based on heuristic
inferred from DOI database lookup
Sequence information can be obtained from single DNA molecules
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Crossref
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https://api.crossref.org/works/10.1038%2FNBT1486
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7 January 2021
based on heuristic
inferred from DOI database lookup
The consensus coding sequences of human breast and colorectal cancers
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7 January 2021
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inferred from DOI database lookup
The genomic landscapes of human breast and colorectal cancers
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7 January 2021
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Quality scores and SNP detection in sequencing-by-synthesis systems
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Pyrobayes: an improved base caller for SNP discovery in pyrosequences.
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SOAP: short oligonucleotide alignment program
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7 January 2021
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SSAHA: a fast search method for large DNA databases
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Mapping short DNA sequencing reads and calling variants using mapping quality scores
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7 January 2021
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ALLPATHS: de novo assembly of whole-genome shotgun microreads
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7 January 2021
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Whole-genome sequencing and assembly with high-throughput, short-read technologies
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Assembling millions of short DNA sequences using SSAKE.
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Velvet: algorithms for de novo short read assembly using de Bruijn graphs
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7 January 2021
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Minimum information about a microarray experiment (MIAME)-toward standards for microarray data
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7 January 2021
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The complete genome of an individual by massively parallel DNA sequencing
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Crossref
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7 January 2021
based on heuristic
inferred from DOI database lookup
SNP discovery and allele frequency estimation by deep sequencing of reduced representation libraries
1 reference
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Crossref
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7 January 2021
based on heuristic
inferred from DOI database lookup
Multigene amplification and massively parallel sequencing for cancer mutation discovery
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Crossref
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7 January 2021
based on heuristic
inferred from DOI database lookup
Multiplex amplification of all coding sequences within 10 cancer genes by Gene-Collector
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7 January 2021
based on heuristic
inferred from DOI database lookup
Multiplex amplification of large sets of human exons
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7 January 2021
based on heuristic
inferred from DOI database lookup
Direct genomic selection.
1 reference
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Crossref
reference URL
https://api.crossref.org/works/10.1038%2FNBT1486
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7 January 2021
based on heuristic
inferred from DOI database lookup
Direct selection of human genomic loci by microarray hybridization
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Crossref
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7 January 2021
based on heuristic
inferred from DOI database lookup
Genome-wide in situ exon capture for selective resequencing
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7 January 2021
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inferred from DOI database lookup
Microarray-based genomic selection for high-throughput resequencing.
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7 January 2021
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inferred from DOI database lookup
Identification of somatically acquired rearrangements in cancer using genome-wide massively parallel paired-end sequencing
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7 January 2021
based on heuristic
inferred from DOI database lookup
Mapping translocation breakpoints by next-generation sequencing
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7 January 2021
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inferred from DOI database lookup
A metagenomic survey of microbes in honey bee colony collapse disorder
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7 January 2021
based on heuristic
inferred from DOI database lookup
Dynamic repertoire of a eukaryotic transcriptome surveyed at single-nucleotide resolution
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7 January 2021
based on heuristic
inferred from DOI database lookup
Transcriptome sequencing of malignant pleural mesothelioma tumors
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7 January 2021
based on heuristic
inferred from DOI database lookup
The transcriptional landscape of the yeast genome defined by RNA sequencing
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7 January 2021
based on heuristic
inferred from DOI database lookup
Mapping and quantifying mammalian transcriptomes by RNA-Seq
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7 January 2021
based on heuristic
inferred from DOI database lookup
Highly integrated single-base resolution maps of the epigenome in Arabidopsis
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7 January 2021
based on heuristic
inferred from DOI database lookup
Polony multiplex analysis of gene expression (PMAGE) in mouse hypertrophic cardiomyopathy
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7 January 2021
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inferred from DOI database lookup
Stem cell transcriptome profiling via massive-scale mRNA sequencing
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7 January 2021
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Analysis of the prostate cancer cell line LNCaP transcriptome using a sequencing-by-synthesis approach.
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7 January 2021
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Application of massively parallel sequencing to microRNA profiling and discovery in human embryonic stem cells
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Massively parallel bisulphite pyrosequencing reveals the molecular complexity of breast cancer-associated cytosine-methylation patterns obtained from tissue and serum DNA.
1 reference
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7 January 2021
based on heuristic
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Identification of novel high-frequency DNA methylation changes in breast cancer
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7 January 2021
based on heuristic
inferred from DOI database lookup
Genome-wide mapping of in vivo protein-DNA interactions
1 reference
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Crossref
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7 January 2021
based on heuristic
inferred from DOI database lookup
Genome-wide profiles of STAT1 DNA association using chromatin immunoprecipitation and massively parallel sequencing
1 reference
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Crossref
reference URL
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7 January 2021
based on heuristic
inferred from DOI database lookup
Dynamic regulation of nucleosome positioning in the human genome
1 reference
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Crossref
reference URL
https://api.crossref.org/works/10.1038%2FNBT1486
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Sequence census methods for functional genomics
1 reference
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Crossref
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https://api.crossref.org/works/10.1038%2FNBT1486
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7 January 2021
based on heuristic
inferred from DOI database lookup
Parallel tagged sequencing on the 454 platform
1 reference
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https://api.crossref.org/works/10.1038%2FNBT1486
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7 January 2021
based on heuristic
inferred from DOI database lookup
Automated generation of heuristics for biological sequence comparison
1 reference
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7 January 2021
based on heuristic
inferred from DOI database lookup
Using quality scores and longer reads improves accuracy of Solexa read mapping
1 reference
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https://api.crossref.org/works/10.1038%2FNBT1486
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7 January 2021
based on heuristic
inferred from DOI database lookup
De novo bacterial genome sequencing: millions of very short reads assembled on a desktop computer
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1038%2FNBT1486
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7 January 2021
based on heuristic
inferred from DOI database lookup
Short read fragment assembly of bacterial genomes
1 reference
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Crossref
reference URL
https://api.crossref.org/works/10.1038%2FNBT1486
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7 January 2021
based on heuristic
inferred from DOI database lookup
SHARCGS, a fast and highly accurate short-read assembly algorithm for de novo genomic sequencing
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1038%2FNBT1486
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Extending assembly of short DNA sequences to handle error.
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1038%2FNBT1486
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Microfluidic devices for DNA sequencing: sample preparation and electrophoretic analysis
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https://api.crossref.org/works/10.1038%2FNBT1486
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7 January 2021
based on heuristic
inferred from DOI database lookup
Integrated nanoliter systems
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7 January 2021
based on heuristic
inferred from DOI database lookup
Microfabricated 384-lane capillary array electrophoresis bioanalyzer for ultrahigh-throughput genetic analysis
1 reference
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https://api.crossref.org/works/10.1038%2FNBT1486
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7 January 2021
based on heuristic
inferred from DOI database lookup
Integrated affinity capture, purification, and capillary electrophoresis microdevice for quantitative double-stranded DNA analysis
1 reference
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Crossref
reference URL
https://api.crossref.org/works/10.1038%2FNBT1486
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7 January 2021
based on heuristic
inferred from DOI database lookup
Inline injection microdevice for attomole-scale sanger DNA sequencing
1 reference
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reference URL
https://api.crossref.org/works/10.1038%2FNBT1486
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7 January 2021
based on heuristic
inferred from DOI database lookup
A nanoliter-scale nucleic acid processor with parallel architecture
1 reference
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reference URL
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7 January 2021
based on heuristic
inferred from DOI database lookup
Blocks of limited haplotype diversity revealed by high-resolution scanning of human chromosome 21.
1 reference
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Crossref
reference URL
https://api.crossref.org/works/10.1038%2FNBT1486
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7 January 2021
based on heuristic
inferred from DOI database lookup
A sequence-based variation map of 8.27 million SNPs in inbred mouse strains
1 reference
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Crossref
reference URL
https://api.crossref.org/works/10.1038%2FNBT1486
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7 January 2021
based on heuristic
inferred from DOI database lookup
Genome-wide detection of polymorphisms at nucleotide resolution with a single DNA microarray
1 reference
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reference URL
https://api.crossref.org/works/10.1038%2FNBT1486
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Mutation discovery in bacterial genomes: metronidazole resistance in Helicobacter pylori.
1 reference
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7 January 2021
based on heuristic
inferred from DOI database lookup
Accurate sequencing by hybridization for DNA diagnostics and individual genomics
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1038%2FNBT1486
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Sequencing of megabase plus DNA by hybridization: theory of the method
1 reference
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Crossref
reference URL
https://api.crossref.org/works/10.1038%2FNBT1486
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Mutation detection and single-molecule counting using isothermal rolling-circle amplification
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1038%2FNBT1486
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Rapid genome sequencing with short universal tiling probes
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1038%2FNBT1486
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Nanopores and nucleic acids: prospects for ultrarapid sequencing
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1038%2FNBT1486
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Rapid nanopore discrimination between single polynucleotide molecules
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1038%2FNBT1486
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
A single-molecule nanopore device detects DNA polymerase activity with single-nucleotide resolution
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1038%2FNBT1486
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Zero-Mode Waveguides for Single-Molecule Analysis at High Concentrations
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1038%2FNBT1486
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Parallel confocal detection of single molecules in real time
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1038%2FNBT1486
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Selective aluminum passivation for targeted immobilization of single DNA polymerase molecules in zero-mode waveguide nanostructures
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1038%2FNBT1486
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Identifiers
DOI
10.1038/NBT1486
2 references
stated in
PubMed
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/esummary.fcgi?db=pubmed&retmode=json&id=18846087
retrieved
23 April 2017
stated in
Consolidated OpenCitations Corpus – April 2017
OpenCitations bibliographic resource ID
308631
Dimensions Publication ID
1005954516
0 references
OpenCitations bibliographic resource ID
308631
1 reference
stated in
Consolidated OpenCitations Corpus – April 2017
OpenCitations bibliographic resource ID
308631
PubMed ID
18846087
2 references
stated in
PubMed
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/esummary.fcgi?db=pubmed&retmode=json&id=18846087
retrieved
23 April 2017
stated in
Consolidated OpenCitations Corpus – April 2017
OpenCitations bibliographic resource ID
308631
ResearchGate publication ID
23310373
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Springer Nature article ID
10.1038/nbt1486
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