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Rho GTPase-activating protein syd-1 CELE_F35D2.5
protein found in Caenorhabditis elegans
Rho GTPase-activating protein syd-1
syd-1
In more languages
edit
Statements
instance of
protein
1 reference
stated in
UniProt
retrieved
5 December 2018
UniProt protein ID
Q86NH1
part of
C2 domain superfamily
1 reference
stated in
InterPro Release 71.0
reference URL
http://www.ebi.ac.uk/interpro/protein/Q86NH1
Rho GTPase activation protein
1 reference
stated in
InterPro Release 71.0
reference URL
http://www.ebi.ac.uk/interpro/protein/Q86NH1
PDZ superfamily
1 reference
stated in
InterPro Release 71.0
reference URL
http://www.ebi.ac.uk/interpro/protein/Q86NH1
C2 domain, protein family
1 reference
based on heuristic
inferred from protein domain or family
Rho GTPase-activating protein domain family
1 reference
based on heuristic
inferred from protein domain or family
PDZ domain, protein family
1 reference
based on heuristic
inferred from protein domain or family
found in taxon
Caenorhabditis elegans
1 reference
stated in
UniProt
retrieved
5 December 2018
UniProt protein ID
Q86NH1
encoded by
syd-1
1 reference
stated in
UniProt
retrieved
5 December 2018
UniProt protein ID
Q86NH1
molecular function
GTPase activator activity
determination method
IEA
IMP
2 references
retrieved
1 January 2018
stated in
SYD-1, a presynaptic protein with PDZ, C2 and rhoGAP-like domains, specifies axon identity in C. elegans
GOA
curator
UniProt
UniProt protein ID
Q86NH1
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:Q86NH1
determination method
IMP
retrieved
1 January 2018
stated in
GOA
curator
UniProt
UniProt protein ID
Q86NH1
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:Q86NH1
determination method
IEA
signaling receptor binding
determination method
IPI
1 reference
retrieved
1 January 2018
stated in
SYD-1C, UNC-40 (DCC) and SAX-3 (Robo) function interdependently to promote axon guidance by regulating the MIG-2 GTPase
GOA
curator
WormBase
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?protein=Q86NH1&geneProductId=UniProtKB:Q86NH1
determination method
IPI
Roundabout binding
determination method
IPI
1 reference
retrieved
1 January 2018
stated in
SYD-1C, UNC-40 (DCC) and SAX-3 (Robo) function interdependently to promote axon guidance by regulating the MIG-2 GTPase
GOA
curator
WormBase
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?protein=Q86NH1&geneProductId=UniProtKB:Q86NH1
determination method
IPI
cell component
cytoplasm
determination method
IBA
1 reference
retrieved
16 July 2018
stated in
GOA
curator
GO Central
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?protein=Q86NH1&geneProductId=UniProtKB:Q86NH1
determination method
IBA
cell junction
determination method
IEA
1 reference
retrieved
1 January 2018
stated in
GOA
curator
UniProt
UniProt protein ID
Q86NH1
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:Q86NH1
determination method
IEA
presynaptic membrane
determination method
IDA
1 reference
retrieved
1 January 2018
stated in
SYD-1, a presynaptic protein with PDZ, C2 and rhoGAP-like domains, specifies axon identity in C. elegans
GOA
curator
WormBase
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:Q86NH1
determination method
IDA
neuron projection
determination method
IEA
1 reference
retrieved
1 January 2018
stated in
GOA
curator
Gene Ontology Consortium
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:Q86NH1
determination method
IEA
synapse
determination method
IDA
IEA
2 references
retrieved
1 January 2018
stated in
GOA
curator
UniProt
UniProt protein ID
Q86NH1
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:Q86NH1
determination method
IEA
retrieved
1 January 2018
stated in
SYD-1, a presynaptic protein with PDZ, C2 and rhoGAP-like domains, specifies axon identity in C. elegans
GOA
curator
UniProt
UniProt protein ID
Q86NH1
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:Q86NH1
determination method
IDA
biological process
signal transduction
determination method
IEA
1 reference
retrieved
1 January 2018
stated in
GOA
curator
InterPro
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:Q86NH1
determination method
IEA
multicellular organism development
determination method
IEA
1 reference
retrieved
1 January 2018
stated in
GOA
curator
UniProt
UniProt protein ID
Q86NH1
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:Q86NH1
determination method
IEA
nervous system development
determination method
IEA
1 reference
retrieved
1 January 2018
stated in
GOA
curator
UniProt
UniProt protein ID
Q86NH1
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:Q86NH1
determination method
IEA
axo-dendritic transport
determination method
IGI
1 reference
retrieved
1 January 2018
stated in
An Arf-like small G protein, ARL-8, promotes the axonal transport of presynaptic cargoes by suppressing vesicle aggregation
GOA
curator
WormBase
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:Q86NH1
determination method
IGI
cell projection organization
determination method
IMP
1 reference
retrieved
1 January 2018
stated in
SYD-1, a presynaptic protein with PDZ, C2 and rhoGAP-like domains, specifies axon identity in C. elegans
GOA
curator
UniProt
UniProt protein ID
Q86NH1
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:Q86NH1
determination method
IMP
cell differentiation
determination method
IEA
1 reference
retrieved
1 January 2018
stated in
GOA
curator
UniProt
UniProt protein ID
Q86NH1
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:Q86NH1
determination method
IEA
locomotion
determination method
IGI
1 reference
retrieved
1 January 2018
stated in
Regulation of a DLK-1 and p38 MAP kinase pathway by the ubiquitin ligase RPM-1 is required for presynaptic development
GOA
curator
WormBase
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:Q86NH1
determination method
IGI
activation of GTPase activity
determination method
IMP
1 reference
retrieved
1 January 2018
stated in
SYD-1, a presynaptic protein with PDZ, C2 and rhoGAP-like domains, specifies axon identity in C. elegans
GOA
curator
UniProt
UniProt protein ID
Q86NH1
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:Q86NH1
determination method
IMP
has part(s)
Rho GTPase-activating protein domain
1 reference
stated in
InterPro Release 71.0
reference URL
http://www.ebi.ac.uk/interpro/protein/Q86NH1
PDZ domain
1 reference
stated in
InterPro Release 71.0
reference URL
http://www.ebi.ac.uk/interpro/protein/Q86NH1
C2 domain
1 reference
stated in
InterPro Release 71.0
reference URL
http://www.ebi.ac.uk/interpro/protein/Q86NH1
Identifiers
RefSeq protein ID
NP_001022146
1 reference
stated in
NCBI Gene
retrieved
14 December 2018
Entrez Gene ID
174230
NP_001022148
1 reference
stated in
NCBI Gene
retrieved
14 December 2018
Entrez Gene ID
174230
NP_495592
1 reference
stated in
NCBI Gene
retrieved
14 December 2018
Entrez Gene ID
174230
UniProt protein ID
Q86NH1
1 reference
stated in
UniProt
retrieved
5 December 2018
UniProt protein ID
Q86NH1
Ensembl protein ID
F35D2.5b
1 reference
stated in
ensembl Release 96
Ensembl protein ID
F35D2.5b
F35D2.5c
1 reference
stated in
ensembl Release 96
Ensembl protein ID
F35D2.5c
F35D2.5a
1 reference
stated in
ensembl Release 96
Ensembl protein ID
F35D2.5a
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