(Q30000683)

English

Genome-wide data (ChIP-seq) enabled identification of cell wall-related and aquaporin genes as targets of tomato ASR1, a drought stress-responsive transcription factor

scientific article (publication date: 14 January 2014)

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5 March 2020

Genome-wide data (ChIP-seq) enabled identification of cell wall-related and aquaporin genes as targets of tomato ASR1, a drought stress-responsive transcription factor (English)

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5 March 2020

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Martiniano M Ricardi

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5 March 2020

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5 March 2020

Pia Guadalupe Dominguez

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Norberto Daniel Iusem

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Rodrigo M González

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5 March 2020

Tomas Duffy

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5 March 2020

Pablo G Turjanski

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5 March 2020

Juan D Salgado Salter

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5 March 2020

Fernando Carrari

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5 March 2020

James J Giovannoni

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5 March 2020

BMC Plant Biology

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5 March 2020

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5 March 2020

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5 March 2020

ChIP-seq guidelines and practices of the ENCODE and modENCODE consortia

1 reference

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The tomato genome sequence provides insights into fleshy fruit evolution

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21 May 2017

Unexpected complexity of the aquaporin gene family in the moss Physcomitrella patens

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21 May 2017

New insights into aluminum tolerance in rice: the ASR5 protein binds the STAR1 promoter and other aluminum-responsive genes.

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3 June 2018

Unique genome-wide map of TCF4 and STAT3 targets using ChIP-seq reveals their association with new molecular subtypes of glioblastoma

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Pitx1 broadly associates with limb enhancers and is enriched on hindlimb cis-regulatory elements

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3 June 2018

Challenges and perspectives to improve crop drought and salinity tolerance

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3 June 2018

Identifying ChIP-seq enrichment using MACS.

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3 June 2018

Insights into Populus XIP aquaporins: evolutionary expansion, protein functionality, and environmental regulation

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3 June 2018

ChIP-seq Analysis in R (CSAR): An R package for the statistical detection of protein-bound genomic regions.

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3 June 2018

Using CisGenome to analyze ChIP-chip and ChIP-seq data

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3 June 2018

GimmeMotifs: a de novo motif prediction pipeline for ChIP-sequencing experiments

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3 June 2018

Protocol: fine-tuning of a Chromatin Immunoprecipitation (ChIP) protocol in tomato

1 reference

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3 June 2018

Large-scale analysis of full-length cDNAs from the tomato (Solanum lycopersicum) cultivar Micro-Tom, a reference system for the Solanaceae genomics

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3 June 2018

Mechanics and modeling of plant cell growth

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3 June 2018

In vivo interference with AtTCP20 function induces severe plant growth alterations and deregulates the expression of many genes important for development

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3 June 2018

When cells lose water: Lessons from biophysics and molecular biology.

1 reference

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3 June 2018

The enigmatic LEA proteins and other hydrophilins.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3923394

3 June 2018

Nucleotide polymorphism in the drought responsive gene Asr2 in wild populations of tomato.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3923394

3 June 2018

Analysis of 90 Mb of the potato genome reveals conservation of gene structures and order with tomato but divergence in repetitive sequence composition.

1 reference

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3 June 2018

Adaptations of higher plant cell walls to water loss: drought vs desiccation.

1 reference

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3 June 2018

Plant aquaporins: membrane channels with multiple integrated functions.

1 reference

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3 June 2018

STAMP: a web tool for exploring DNA-binding motif similarities

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3 June 2018

Proteome response of Elymus elongatum to severe water stress and recovery

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3 June 2018

Tocopherols play a crucial role in low-temperature adaptation and Phloem loading in Arabidopsis

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3 June 2018

Isolation and functional characterization of three aquaporins from olive (Olea europaea L.).

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3 June 2018

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1 reference

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3 June 2018

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3 June 2018

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3 June 2018

Differential expression of the Arabidopsis cytochrome c genes Cytc-1 and Cytc-2. Evidence for the involvement of TCP-domain protein-binding elements in anther- and meristem-specific expression of the Cytc-1 gene

1 reference

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3 June 2018

Identification of an interactor of cadmium ion-induced glycine-rich protein involved in regulation of callose levels in plant vasculature.

1 reference

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3 June 2018

An expression analysis of a gene family encoding plasma membrane aquaporins in response to abiotic stresses in Arabidopsis thaliana

1 reference

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3 June 2018

The water- and salt-stress-regulated Asr1 (abscisic acid stress ripening) gene encodes a zinc-dependent DNA-binding protein

1 reference

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3 June 2018

Monitoring the expression profiles of 7000 Arabidopsis genes under drought, cold and high-salinity stresses using a full-length cDNA microarray

1 reference

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3 June 2018

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3 June 2018

Adaptation of roots to low water potentials by changes in cell wall extensibility and cell wall proteins

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3 June 2018

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3 June 2018

cis regulatory elements directing tuber-specific and sucrose-inducible expression of a chimeric class I patatin promoter/GUS-gene fusion

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3 June 2018

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21 January 2018

Tomato (Lycopersicon esculentum) transcript induced by water deficit and ripening

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21 January 2018

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21 January 2018

A grape ASR protein involved in sugar and abscisic acid signaling

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21 January 2018

Tomato ASR1 abrogates the response to abscisic acid and glucose in Arabidopsis by competing with ABI4 for DNA binding

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21 January 2018

ci21A/Asr1 expression influences glucose accumulation in potato tubers.

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21 January 2018

Transport functions and expression analysis of vacuolar membrane aquaporins in response to various stresses in rice

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21 January 2018

Two TIP-like genes encoding aquaporins are expressed in sunflower guard cells

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21 January 2018

A plasmodesmata-associated beta-1,3-glucanase in Arabidopsis.

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21 January 2018

Arabidopsis PPR40 connects abiotic stress responses to mitochondrial electron transport

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21 January 2018

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21 January 2018

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21 January 2018

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12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Dimerization and DNA-binding of ASR1, a small hydrophilic protein abundant in plant tissues suffering from water loss

1 reference

https://pubmed.ncbi.nlm.nih.gov/24423251

12 December 2020

based on heuristic

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10.1186/1471-2229-14-29

2 references

Consolidated OpenCitations Corpus – April 2017

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5 March 2020

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OpenCitations bibliographic resource ID

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Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

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2 references

Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

Europe PubMed Central

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24423251%20AND%20SRC:MED&resulttype=core&format=json

5 March 2020

PubMed publication ID

2 references

Consolidated OpenCitations Corpus – April 2017

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Europe PubMed Central

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5 March 2020

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