Home
Random
Nearby
Log in
Settings
Donate
About Wikidata
Disclaimers
Search
(Q30327881)
Watch
English
Automated search of natively folded protein fragments for high-throughput structure determination in structural genomics.
scientific article
In more languages
edit
Statements
instance of
scholarly article
1 reference
stated in
Europe PubMed Central
PMC publication ID
2144534
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:11206052%20AND%20SRC:MED&resulttype=core&format=json
retrieved
4 November 2019
title
Automated search of natively folded protein fragments for high-throughput structure determination in structural genomics
(English)
1 reference
stated in
Europe PubMed Central
PMC publication ID
2144534
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:11206052%20AND%20SRC:MED&resulttype=core&format=json
retrieved
4 November 2019
main subject
protein folding
0 references
automation
1 reference
based on heuristic
inferred from title
author
Shigeyuki Yokoyama
series ordinal
4
1 reference
stated in
Europe PubMed Central
PMC publication ID
2144534
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:11206052%20AND%20SRC:MED&resulttype=core&format=json
retrieved
4 November 2019
author name string
Kuroda Y
series ordinal
1
1 reference
stated in
Europe PubMed Central
PMC publication ID
2144534
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:11206052%20AND%20SRC:MED&resulttype=core&format=json
retrieved
4 November 2019
Tani K
series ordinal
2
1 reference
stated in
Europe PubMed Central
PMC publication ID
2144534
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:11206052%20AND%20SRC:MED&resulttype=core&format=json
retrieved
4 November 2019
Matsuo Y
series ordinal
3
1 reference
stated in
Europe PubMed Central
PMC publication ID
2144534
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:11206052%20AND%20SRC:MED&resulttype=core&format=json
retrieved
4 November 2019
publication date
1 December 2000
1 reference
stated in
Europe PubMed Central
PMC publication ID
2144534
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:11206052%20AND%20SRC:MED&resulttype=core&format=json
retrieved
4 November 2019
published in
Protein Science
1 reference
stated in
Europe PubMed Central
PMC publication ID
2144534
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:11206052%20AND%20SRC:MED&resulttype=core&format=json
retrieved
4 November 2019
volume
9
1 reference
stated in
Europe PubMed Central
PMC publication ID
2144534
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:11206052%20AND%20SRC:MED&resulttype=core&format=json
retrieved
4 November 2019
issue
12
1 reference
stated in
Europe PubMed Central
PMC publication ID
2144534
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:11206052%20AND%20SRC:MED&resulttype=core&format=json
retrieved
4 November 2019
page(s)
2313-2321
1 reference
stated in
Europe PubMed Central
PMC publication ID
2144534
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:11206052%20AND%20SRC:MED&resulttype=core&format=json
retrieved
4 November 2019
cites work
Selecting protein targets for structural genomics of Pyrobaculum aerophilum: validating automated fold assignment methods by using binary hypothesis testing
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2144534
retrieved
3 June 2018
Solution structure of the CIDE-N domain of CIDE-B and a model for CIDE-N/CIDE-N interactions in the DNA fragmentation pathway of apoptosis
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2144534
retrieved
3 June 2018
GenBank
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2144534
retrieved
3 June 2018
Crystal structure of Thermus thermophilus HB8 UvrB protein, a key enzyme of nucleotide excision repair
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2144534
retrieved
3 June 2018
Directed evolution of thermostable kanamycin-resistance gene: a convenient selection marker for Thermus thermophilus
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2144534
retrieved
3 June 2018
Structural genomics: beyond the human genome project
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2144534
retrieved
3 June 2018
From protein structure to function.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2144534
retrieved
3 June 2018
Sequence analysis of the genome of Bombyx mori nucleopolyhedrovirus
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2144534
retrieved
3 June 2018
Solution structure of the Eps15 homology domain of a human POB1 (partner of RalBP1)
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2144534
retrieved
3 June 2018
SCOP: a Structural Classification of Proteins database.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2144534
retrieved
3 June 2018
The PRESAGE database for structural genomics
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2144534
retrieved
3 June 2018
TROSY in triple-resonance experiments: new perspectives for sequential NMR assignment of large proteins
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2144534
retrieved
3 June 2018
SSMAL: similarity searching with alignment graphs
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2144534
retrieved
3 June 2018
The second decade--into the third millenium
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2144534
retrieved
3 June 2018
Structural genomics: bioinformatics in the driver's seat
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2144534
retrieved
3 June 2018
The structural aspects of limited proteolysis of native proteins
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2144534
retrieved
3 June 2018
The ProDom database of protein domain families
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2144534
retrieved
3 June 2018
Touring protein fold space with Dali/FSSP
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2144534
retrieved
3 June 2018
NMR structures of proteins and protein complexes beyond 20,000 M(r).
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2144534
retrieved
3 June 2018
CATH--a hierarchic classification of protein domain structures
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2144534
retrieved
3 June 2018
Gapped BLAST and PSI-BLAST: a new generation of protein database search programs
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2144534
retrieved
3 June 2018
Pfam: a comprehensive database of protein domain families based on seed alignments
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2144534
retrieved
3 June 2018
Solution structure of the link module: a hyaluronan-binding domain involved in extracellular matrix stability and cell migration
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2144534
retrieved
3 June 2018
The SWISS-PROT protein sequence data bank and its new supplement TREMBL
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2144534
retrieved
3 June 2018
Modular arrangement of proteins as inferred from analysis of homology.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2144534
retrieved
3 June 2018
Protein superfamilies and domain superfolds
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2144534
retrieved
3 June 2018
Building protein structure and function from modular units
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2144534
retrieved
3 June 2018
SCOP: a structural classification of proteins database for the investigation of sequences and structures
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2144534
retrieved
3 June 2018
Solution structure of the SH3 domain of phospholipase C-gamma
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2144534
retrieved
3 June 2018
Dictionary of protein secondary structure: pattern recognition of hydrogen-bonded and geometrical features
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2144534
retrieved
3 June 2018
Basic local alignment search tool
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2144534
retrieved
3 June 2018
Structure of the fibronectin type 1 module
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2144534
retrieved
3 June 2018
Solution structure of the SH3 domain of Src and identification of its ligand-binding site
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2144534
retrieved
3 June 2018
Q57663110
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2144534
retrieved
26 November 2018
A comparison of sequence and structure protein domain families as a basis for structural genomics.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2144534
retrieved
26 November 2018
Blocks+: a non-redundant database of protein alignment blocks derived from multiple compilations.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2144534
retrieved
26 November 2018
Shining a light on structural genomics.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2144534
retrieved
26 November 2018
Automated protein sequence database classification. I. Integration of compositional similarity search, local similarity search, and multiple sequence alignment.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2144534
retrieved
26 November 2018
The Argonne Structural Genomics Workshop: Lamaze class for the birth of a new science
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/11206052
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
Identifiers
DOI
10.1110/PS.9.12.2313
1 reference
stated in
Europe PubMed Central
PMC publication ID
2144534
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:11206052%20AND%20SRC:MED&resulttype=core&format=json
retrieved
4 November 2019
PMC publication ID
2144534
1 reference
stated in
Europe PubMed Central
PMC publication ID
2144534
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:11206052%20AND%20SRC:MED&resulttype=core&format=json
retrieved
4 November 2019
PubMed publication ID
11206052
1 reference
stated in
Europe PubMed Central
PMC publication ID
2144534
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:11206052%20AND%20SRC:MED&resulttype=core&format=json
retrieved
4 November 2019
ResearchGate publication ID
227701357
0 references
Sitelinks
Wikipedia
(0 entries)
edit
Wikibooks
(0 entries)
edit
Wikinews
(0 entries)
edit
Wikiquote
(0 entries)
edit
Wikisource
(0 entries)
edit
Wikiversity
(0 entries)
edit
Wikivoyage
(0 entries)
edit
Wiktionary
(0 entries)
edit
Multilingual sites
(0 entries)
edit