(Q30329611)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:11839486%20AND%20SRC:MED&resulttype=core&format=json

7 December 2019

review article

1 reference

title

Prediction of protein-protein interactions by docking methods (English)

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:11839486%20AND%20SRC:MED&resulttype=core&format=json

protein-protein interaction

7 December 2019

main subject

1 reference

2

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:11839486%20AND%20SRC:MED&resulttype=core&format=json

7 December 2019

author name string

Graham R Smith

series ordinal

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:11839486%20AND%20SRC:MED&resulttype=core&format=json

7 December 2019

publication date

1 February 2002

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:11839486%20AND%20SRC:MED&resulttype=core&format=json

Current Opinion in Structural Biology

7 December 2019

published in

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:11839486%20AND%20SRC:MED&resulttype=core&format=json

7 December 2019

volume

12

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:11839486%20AND%20SRC:MED&resulttype=core&format=json

7 December 2019

page(s)

28-35

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:11839486%20AND%20SRC:MED&resulttype=core&format=json

7 December 2019

issue

1

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:11839486%20AND%20SRC:MED&resulttype=core&format=json

Principles of protein-protein interactions

7 December 2019

cites work

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7 January 2021

The atomic structure of protein-protein recognition sites

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7 January 2021

Examination of shape complementarity in docking ofUnbound proteins

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7 January 2021

An analysis of conformational changes on protein-protein association: implications for predictive docking.

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7 January 2021

Comparison of protein-protein interactions in serine protease-inhibitor and antibody-antigen complexes: implications for the protein docking problem

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7 January 2021

Analytical molecular surface calculation

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7 January 2021

Degenerate interfaces in antigen-antibody complexes

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7 January 2021

Electrostatic aspects of protein-protein interactions.

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7 January 2021

Electrostatics calculations: recent methodological advances and applications to membranes

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7 January 2021

A continuum model for protein-protein interactions: application to the docking problem.

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7 January 2021

Determination of atomic desolvation energies from the structures of crystallized proteins.

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7 January 2021

The Fourier-Green's function and the rapid evaluation of molecular potentials.

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7 January 2021

Molecular surface recognition: determination of geometric fit between proteins and their ligands by correlation techniques

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7 January 2021

Modelling protein docking using shape complementarity, electrostatics and biochemical information

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7 January 2021

Protein docking for low-resolution structures.

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7 January 2021

Molecular docking programs successfully predict the binding of a beta-lactamase inhibitory protein to TEM-1 beta-lactamase

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7 January 2021

Protein docking using continuum electrostatics and geometric fit

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7 January 2021

A systematic study of low-resolution recognition in protein--protein complexes

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7 January 2021

Protein docking using a genetic algorithm.

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7 January 2021

Electrostatic contributions to protein-protein interactions: fast energetic filters for docking and their physical basis

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7 January 2021

A general and fast scoring function for protein-ligand interactions: a simplified potential approach.

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7 January 2021

Graph-theoretic techniques for macromolecular docking

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7 January 2021

Scoring docked conformations generated by rigid-body protein-protein docking.

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7 January 2021

Rapid refinement of protein interfaces incorporating solvation: application to the docking problem

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7 January 2021

FlexE: efficient molecular docking considering protein structure variations.

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7 January 2021

DOCK 4.0: Search strategies for automated molecular docking of flexible molecule databases

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7 January 2021

Development and validation of a genetic algorithm for flexible docking

1 reference

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7 January 2021

Protein docking along smooth association pathways

1 reference

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7 January 2021

The morph server: a standardized system for analyzing and visualizing macromolecular motions in a database framework

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7 January 2021

A method for biomolecular structural recognition and docking allowing conformational flexibility

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7 January 2021

Automated structure-based prediction of functional sites in proteins: applications to assessing the validity of inheriting protein function from homology in genome annotation and to protein docking.

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7 January 2021

Conservation of polar residues as hot spots at protein interfaces

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7 January 2021

Protein functional epitopes: hot spots, dynamics and combinatorial libraries

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7 January 2021

Automated multiple structure alignment and detection of a common substructural motif.

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7 January 2021

Accurate and rapid docking of protein-protein complexes on the basis of intermolecular nuclear overhauser enhancement data and dipolar couplings by rigid body minimization

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7 January 2021

Structure prediction of protein complexes by an NMR-based protein docking algorithm.

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7 January 2021

A novel approach for assessing macromolecular complexes combining soft-docking calculations with NMR data.

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7 January 2021

The kinetics of protein-protein recognition.

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7 January 2021

Rapid, electrostatically assisted association of proteins

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7 January 2021

Free energy landscapes of encounter complexes in protein-protein association

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7 January 2021

Biomolecular diffusional association

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7 January 2021

Protein-protein association: investigation of factors influencing association rates by Brownian dynamics simulations

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7 January 2021

Kinetics of desolvation-mediated protein-protein binding

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7 January 2021

Folding funnels, binding funnels, and protein function

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7 January 2021

How common is the funnel-like energy landscape in protein-protein interactions?

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7 January 2021

Dynamical view of the positions of key side chains in protein-protein recognition

1 reference

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7 January 2021

Macromolecular crowding: obvious but underappreciated

1 reference

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7 January 2021

Calculation of weak protein-protein interactions: the pH dependence of the second virial coefficient

1 reference

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7 January 2021

Wet and dry interfaces: the role of solvent in protein-protein and protein-DNA recognition

1 reference

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7 January 2021

Discrimination of near-native protein structures from misfolded models by empirical free energy functions

1 reference

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7 January 2021

10.1016/S0959-440X(02)00285-3

Identifiers

DOI

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:11839486%20AND%20SRC:MED&resulttype=core&format=json

7 December 2019

1 reference